RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 ATOX1O00244 68 aa11.7□□□□□ -0.54
SMARCA4-203ENST00000429416 LINC00643Q86TS7 51 aa11.7□□□□□ -0.54
SMARCA4-203ENST00000429416 CDH23Q9H251 3354 aa11.7□□□□□ -0.54
SMARCA4-203ENST00000429416 CSNK1G2-AS1Q8NCQ2 148 aa11.69□□□□□ -0.54
SMARCA4-203ENST00000429416 TEX15Q9BXT5 2789 aa11.68□□□□□ -0.54
SMARCA4-203ENST00000429416 Q8N814 137 aa11.68□□□□□ -0.54
SMARCA4-203ENST00000429416 C6orf48Q9UBA6 75 aa11.68□□□□□ -0.54
SMARCA4-203ENST00000429416 SMCR5Q8TEV8 140 aa11.68□□□□□ -0.54
SMARCA4-203ENST00000429416 IGSF10Q6WRI0 2623 aa11.67□□□□□ -0.54
SMARCA4-203ENST00000429416 NDUFC2O95298 119 aa11.67□□□□□ -0.54
SMARCA4-203ENST00000429416 COL6A5A8TX70 2615 aa11.67□□□□□ -0.54
SMARCA4-203ENST00000429416 CFAP54Q96N23 3096 aa11.66□□□□□ -0.54
SMARCA4-203ENST00000429416 FAM19A3Q7Z5A8 133 aa11.66□□□□□ -0.54
SMARCA4-203ENST00000429416 PHF5AQ7RTV0 110 aaKnown RBP11.65□□□□□ -0.54
SMARCA4-203ENST00000429416 LINC00167Q96N53 147 aa11.65□□□□□ -0.54
SMARCA4-203ENST00000429416 TM2D3Q9BRN9 247 aa11.65□□□□□ -0.54
SMARCA4-203ENST00000429416 CHTF8P0CG12 524 aa11.65□□□□□ -0.54
SMARCA4-203ENST00000429416 C5orf47Q569G3 176 aa11.64□□□□□ -0.55
SMARCA4-203ENST00000429416 DNAH10OSP0CZ25 163 aa11.64□□□□□ -0.55
SMARCA4-203ENST00000429416 J3QL48 77 aa11.64□□□□□ -0.55
SMARCA4-203ENST00000429416 SEC61GP60059 68 aa11.64□□□□□ -0.55
SMARCA4-203ENST00000429416 A0A087WYN8 130 aa11.63□□□□□ -0.55
SMARCA4-203ENST00000429416 SMIM20Q8N5G0 67 aa11.63□□□□□ -0.55
SMARCA4-203ENST00000429416 Q6JHZ5 121 aa11.63□□□□□ -0.55
SMARCA4-203ENST00000429416 IGHV6-1A0A0B4J1U7 121 aa11.63□□□□□ -0.55
SMARCA4-203ENST00000429416 LINC00337Q8N6G1 96 aa11.63□□□□□ -0.55
SMARCA4-203ENST00000429416 UNC79Q9P2D8 2635 aa11.63□□□□□ -0.55
SMARCA4-203ENST00000429416 CHD6Q8TD26 2715 aa11.61□□□□□ -0.55
SMARCA4-203ENST00000429416 A0A087WSZ3 146 aa11.61□□□□□ -0.55
SMARCA4-203ENST00000429416 Q6ZRP5 223 aa11.6□□□□□ -0.55
SMARCA4-203ENST00000429416 IGLV5-39A0A0G2JS06 123 aa11.59□□□□□ -0.55
SMARCA4-203ENST00000429416 GIG44P09565 113 aaPredicted RBP11.59□□□□□ -0.55
SMARCA4-203ENST00000429416 SPACA4Q8TDM5 124 aa11.59□□□□□ -0.55
SMARCA4-203ENST00000429416 PLA2G1BP04054 148 aaKnown RBP11.58□□□□□ -0.56
SMARCA4-203ENST00000429416 LIMD2Q9BT23 127 aa11.58□□□□□ -0.56
SMARCA4-203ENST00000429416 RETNLBQ9BQ08 111 aa11.58□□□□□ -0.56
SMARCA4-203ENST00000429416 ATP5EP2Q5VTU8 51 aa11.57□□□□□ -0.56
SMARCA4-203ENST00000429416 MAP1AP78559 2803 aaPredicted RBP11.56□□□□□ -0.56
SMARCA4-203ENST00000429416 TMEM258P61165 79 aa11.56□□□□□ -0.56
SMARCA4-203ENST00000429416 MOBPQ13875 183 aa11.56□□□□□ -0.56
SMARCA4-203ENST00000429416 DEFB116Q30KQ4 102 aa11.56□□□□□ -0.56
SMARCA4-203ENST00000429416 SZT2Q5T011 3432 aa11.53□□□□□ -0.56
SMARCA4-203ENST00000429416 LINC00575Q6W349 94 aa11.53□□□□□ -0.56
SMARCA4-203ENST00000429416 CRYGAP11844 174 aa11.53□□□□□ -0.56
SMARCA4-203ENST00000429416 RPL37AP61513 92 aaKnown RBP11.53□□□□□ -0.56
SMARCA4-203ENST00000429416 GVQW2A0A096LPI5 108 aaPredicted RBP11.53□□□□□ -0.56
SMARCA4-203ENST00000429416 FAM236DA0A1B0GTK5 79 aa11.52□□□□□ -0.56
SMARCA4-203ENST00000429416 FAM236CP0DP71 79 aa11.52□□□□□ -0.56
SMARCA4-203ENST00000429416 FAM30AQ9NZY2 134 aa11.52□□□□□ -0.57
SMARCA4-203ENST00000429416 C20orf197Q8N268 126 aa11.52□□□□□ -0.57
SMARCA4-203ENST00000429416 SMR3BP02814 79 aaPredicted RBP11.52□□□□□ -0.57
SMARCA4-203ENST00000429416 B5MCH6 92 aa11.51□□□□□ -0.57
SMARCA4-203ENST00000429416 TYMSOSQ8TAI1 123 aa11.51□□□□□ -0.57
SMARCA4-203ENST00000429416 GCN1Q92616 2671 aaKnown RBP11.5□□□□□ -0.57
SMARCA4-203ENST00000429416 Q6ZVQ6 151 aa11.48□□□□□ -0.57
SMARCA4-203ENST00000429416 C3orf22Q8N5N4 141 aa11.47□□□□□ -0.57
SMARCA4-203ENST00000429416 EPM2AB3EWF7 344 aa11.47□□□□□ -0.57
SMARCA4-203ENST00000429416 IGLV5-45A0A087WSX0 123 aa11.46□□□□□ -0.57
SMARCA4-203ENST00000429416 KIAA0087Q14695 138 aa11.46□□□□□ -0.57
SMARCA4-203ENST00000429416 A0A087WTM6 91 aa11.46□□□□□ -0.57
SMARCA4-203ENST00000429416 APLNQ9ULZ1 77 aa11.46□□□□□ -0.58
SMARCA4-203ENST00000429416 MT-ATP8P03928 68 aa11.45□□□□□ -0.58
SMARCA4-203ENST00000429416 VPS13AQ96RL7 3174 aa11.45□□□□□ -0.58
SMARCA4-203ENST00000429416 LINC01546A6NGU7 62 aa11.44□□□□□ -0.58
SMARCA4-203ENST00000429416 FAM168BA1KXE4 195 aa11.44□□□□□ -0.58
SMARCA4-203ENST00000429416 Q8N9L7 120 aa11.43□□□□□ -0.58
SMARCA4-203ENST00000429416 LINC01547P58512 204 aaPredicted RBP11.43□□□□□ -0.58
SMARCA4-203ENST00000429416 LINC00336Q6ZUF6 198 aa11.43□□□□□ -0.58
SMARCA4-203ENST00000429416 PRR4Q16378 134 aa11.41□□□□□ -0.58
SMARCA4-203ENST00000429416 CR1P17927 2039 aa11.4□□□□□ -0.58
SMARCA4-203ENST00000429416 BCE1O60756 84 aa11.4□□□□□ -0.59
SMARCA4-203ENST00000429416 NOTCH1P46531 2555 aa11.39□□□□□ -0.59
SMARCA4-203ENST00000429416 COL6A3P12111 3177 aa11.39□□□□□ -0.59
SMARCA4-203ENST00000429416 LINC00612Q8N6U2 182 aa11.38□□□□□ -0.59
SMARCA4-203ENST00000429416 J3KT08 172 aa11.38□□□□□ -0.59
SMARCA4-203ENST00000429416 Q6ZRX8 168 aa11.38□□□□□ -0.59
SMARCA4-203ENST00000429416 SOSTDC1Q6X4U4 206 aa11.37□□□□□ -0.59
SMARCA4-203ENST00000429416 LINC00476Q8WZB0 136 aa11.37□□□□□ -0.59
SMARCA4-203ENST00000429416 CASC10Q5T4H9 136 aa11.36□□□□□ -0.59
SMARCA4-203ENST00000429416 SNURFQ9Y675 71 aa11.35□□□□□ -0.59
SMARCA4-203ENST00000429416 Q6Q795 121 aa11.35□□□□□ -0.59
SMARCA4-203ENST00000429416 ST20-AS1Q8NBB2 130 aa11.35□□□□□ -0.59
SMARCA4-203ENST00000429416 PRR34Q9NV39 138 aa11.34□□□□□ -0.59
SMARCA4-203ENST00000429416 SERTAD4-AS1Q5TG53 156 aa11.33□□□□□ -0.6
SMARCA4-203ENST00000429416 LINC00208Q96KT6 92 aa11.33□□□□□ -0.6
SMARCA4-203ENST00000429416 Q8NBF4 154 aa11.33□□□□□ -0.6
SMARCA4-203ENST00000429416 ELOF1P60002 83 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-203ENST00000429416 NBEAL1Q6ZS30 2694 aa11.33□□□□□ -0.6
SMARCA4-203ENST00000429416 C15orf56Q8N910 161 aa11.32□□□□□ -0.6
SMARCA4-203ENST00000429416 C9orf163Q8N9P6 203 aa11.3□□□□□ -0.6
SMARCA4-203ENST00000429416 VPREB1P12018 145 aa11.29□□□□□ -0.6
SMARCA4-203ENST00000429416 FRYLO94915 3013 aa11.29□□□□□ -0.6
SMARCA4-203ENST00000429416 IGKV2D-30A0A075B6S6 120 aa11.29□□□□□ -0.6
SMARCA4-203ENST00000429416 IGKV2-30P06310 120 aa11.29□□□□□ -0.6
SMARCA4-203ENST00000429416 UBR5O95071 2799 aaPredicted RBP11.28□□□□□ -0.6
SMARCA4-203ENST00000429416 HCG22E2RYF7 251 aa11.28□□□□□ -0.6
SMARCA4-203ENST00000429416 SERP1Q9Y6X1 66 aa11.27□□□□□ -0.61
SMARCA4-203ENST00000429416 A0A087WVE0 104 aa11.27□□□□□ -0.61
SMARCA4-203ENST00000429416 TNP2Q05952 138 aa11.27□□□□□ -0.61
SMARCA4-203ENST00000429416 REV3LO60673 3130 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms