RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 C10orf25Q5T742 122 aa6.3□□□□□ -1.4
HMGCLL1-206ENST00000428842 DAND5Q8N907 189 aa6.3□□□□□ -1.4
HMGCLL1-206ENST00000428842 PRSS2P07478 247 aa6.29□□□□□ -1.4
HMGCLL1-206ENST00000428842 HERVK_113P63121 156 aa6.29□□□□□ -1.4
HMGCLL1-206ENST00000428842 CFAP161Q6P656 301 aa6.29□□□□□ -1.4
HMGCLL1-206ENST00000428842 C1orf43Q9BWL3 253 aa6.29□□□□□ -1.4
HMGCLL1-206ENST00000428842 EPPK1P58107 5090 aaKnown RBP6.29□□□□□ -1.4
HMGCLL1-206ENST00000428842 C3orf84H3BNL1 204 aa6.29□□□□□ -1.4
HMGCLL1-206ENST00000428842 MALP21145 153 aa6.28□□□□□ -1.4
HMGCLL1-206ENST00000428842 TRBV10-2A0A0K0K1G8 114 aa6.28□□□□□ -1.4
HMGCLL1-206ENST00000428842 SLPIP03973 132 aa6.28□□□□□ -1.4
HMGCLL1-206ENST00000428842 NPC2P61916 151 aa6.28□□□□□ -1.4
HMGCLL1-206ENST00000428842 CD164L2Q6UWJ8 174 aa6.28□□□□□ -1.4
HMGCLL1-206ENST00000428842 C15orf56Q8N910 161 aa6.28□□□□□ -1.4
HMGCLL1-206ENST00000428842 COX7A2LO14548 114 aa6.27□□□□□ -1.41
HMGCLL1-206ENST00000428842 XGP55808 180 aa6.27□□□□□ -1.41
HMGCLL1-206ENST00000428842 A0A087WZ39 114 aa6.27□□□□□ -1.41
HMGCLL1-206ENST00000428842 PSCAO43653 123 aa6.27□□□□□ -1.41
HMGCLL1-206ENST00000428842 MT-ATP8P03928 68 aa6.27□□□□□ -1.41
HMGCLL1-206ENST00000428842 RPL13AP40429 203 aaKnown RBP6.27□□□□□ -1.41
HMGCLL1-206ENST00000428842 USP17L23D6RBM5 183 aa6.26□□□□□ -1.41
HMGCLL1-206ENST00000428842 UNQ6190/PRO20217Q6UXQ8 127 aa6.26□□□□□ -1.41
HMGCLL1-206ENST00000428842 Q6ZRN7 208 aaPredicted RBP6.26□□□□□ -1.41
HMGCLL1-206ENST00000428842 CIRBPQ14011 172 aaKnown RBP6.26□□□□□ -1.41
HMGCLL1-206ENST00000428842 Q6ZR54 194 aa6.26□□□□□ -1.41
HMGCLL1-206ENST00000428842 LINC00308Q8TCZ7 52 aa6.26□□□□□ -1.41
HMGCLL1-206ENST00000428842 NTN5Q8WTR8 489 aaPredicted RBP6.26□□□□□ -1.41
HMGCLL1-206ENST00000428842 A0A1B0GV72 72 aa6.25□□□□□ -1.41
HMGCLL1-206ENST00000428842 COX6CP09669 75 aa6.25□□□□□ -1.41
HMGCLL1-206ENST00000428842 TNP2Q05952 138 aa6.25□□□□□ -1.41
HMGCLL1-206ENST00000428842 PPDPFQ9H3Y8 114 aa6.25□□□□□ -1.41
HMGCLL1-206ENST00000428842 H3BT86 120 aa6.25□□□□□ -1.41
HMGCLL1-206ENST00000428842 LST1O00453 97 aa6.25□□□□□ -1.41
HMGCLL1-206ENST00000428842 PFN2P35080 140 aa6.25□□□□□ -1.41
HMGCLL1-206ENST00000428842 KIAA0087Q14695 138 aa6.24□□□□□ -1.41
HMGCLL1-206ENST00000428842 RTL8CO15255 209 aa6.24□□□□□ -1.41
HMGCLL1-206ENST00000428842 SPAG11BQ08648 103 aa6.24□□□□□ -1.41
HMGCLL1-206ENST00000428842 C6orf226Q5I0X4 101 aa6.24□□□□□ -1.41
HMGCLL1-206ENST00000428842 SOSTDC1Q6X4U4 206 aa6.23□□□□□ -1.41
HMGCLL1-206ENST00000428842 COX7B2Q8TF08 81 aa6.23□□□□□ -1.41
HMGCLL1-206ENST00000428842 COPS9Q8WXC6 57 aa6.23□□□□□ -1.41
HMGCLL1-206ENST00000428842 CLEC2BQ92478 149 aa6.23□□□□□ -1.41
HMGCLL1-206ENST00000428842 CKS1BP61024 79 aa6.23□□□□□ -1.41
HMGCLL1-206ENST00000428842 HERV-K104P63124 156 aa6.23□□□□□ -1.41
HMGCLL1-206ENST00000428842 HAMPP81172 84 aa6.23□□□□□ -1.41
HMGCLL1-206ENST00000428842 Q6ZRU5 148 aa6.23□□□□□ -1.41
HMGCLL1-206ENST00000428842 TRAV8-4A0A0B4J246 113 aa6.22□□□□□ -1.41
HMGCLL1-206ENST00000428842 TEX49A0A1B0GTD5 131 aa6.22□□□□□ -1.41
HMGCLL1-206ENST00000428842 DNAH8Q96JB1 4490 aa6.22□□□□□ -1.41
HMGCLL1-206ENST00000428842 LRCOL1A6NCL2 159 aa6.21□□□□□ -1.41
HMGCLL1-206ENST00000428842 LCE6AA0A183 80 aa6.21□□□□□ -1.42
HMGCLL1-206ENST00000428842 C1orf134Q5TEV5 83 aa6.21□□□□□ -1.42
HMGCLL1-206ENST00000428842 ZNF561-AS1K7EIQ3 104 aa6.2□□□□□ -1.42
HMGCLL1-206ENST00000428842 KRTAP10-2P60368 255 aa6.2□□□□□ -1.42
HMGCLL1-206ENST00000428842 MEIG1Q5JSS6 88 aa6.2□□□□□ -1.42
HMGCLL1-206ENST00000428842 CAMK2N2Q96S95 79 aa6.19□□□□□ -1.42
HMGCLL1-206ENST00000428842 XAGE1AQ9HD64 81 aa6.19□□□□□ -1.42
HMGCLL1-206ENST00000428842 C6orf48Q9UBA6 75 aa6.19□□□□□ -1.42
HMGCLL1-206ENST00000428842 LRP1BQ9NZR2 4599 aa6.19□□□□□ -1.42
HMGCLL1-206ENST00000428842 PRR3P79522 188 aaKnown RBP6.19□□□□□ -1.42
HMGCLL1-206ENST00000428842 Q8NDZ9 215 aa6.19□□□□□ -1.42
HMGCLL1-206ENST00000428842 CHTF8P0CG12 524 aa6.18□□□□□ -1.42
HMGCLL1-206ENST00000428842 TTC32Q5I0X7 151 aa6.18□□□□□ -1.42
HMGCLL1-206ENST00000428842 DYNC1H1Q14204 4646 aaKnown RBP6.18□□□□□ -1.42
HMGCLL1-206ENST00000428842 FAM240AA0A1B0GVK7 77 aa6.18□□□□□ -1.42
HMGCLL1-206ENST00000428842 PANO1I0J062 215 aa6.18□□□□□ -1.42
HMGCLL1-206ENST00000428842 GAGE2EQ4V326 116 aa6.18□□□□□ -1.42
HMGCLL1-206ENST00000428842 GAGE2DQ9UEU5 116 aa6.18□□□□□ -1.42
HMGCLL1-206ENST00000428842 A0A087WTM6 91 aa6.17□□□□□ -1.42
HMGCLL1-206ENST00000428842 Q6Q795 121 aa6.17□□□□□ -1.42
HMGCLL1-206ENST00000428842 IGKV2-24A0A0C4DH68 120 aa6.17□□□□□ -1.42
HMGCLL1-206ENST00000428842 FAM168BA1KXE4 195 aa6.16□□□□□ -1.42
HMGCLL1-206ENST00000428842 SNCGO76070 127 aa6.16□□□□□ -1.42
HMGCLL1-206ENST00000428842 TRACP01848 142 aa6.16□□□□□ -1.42
HMGCLL1-206ENST00000428842 LINC00158P58513 81 aa6.16□□□□□ -1.42
HMGCLL1-206ENST00000428842 Q8IZM0 81 aa6.16□□□□□ -1.42
HMGCLL1-206ENST00000428842 Q6ZRP5 223 aa6.16□□□□□ -1.42
HMGCLL1-206ENST00000428842 GVQW2A0A096LPI5 108 aaPredicted RBP6.15□□□□□ -1.42
HMGCLL1-206ENST00000428842 TRAV13-2A0A0B4J235 113 aa6.15□□□□□ -1.42
HMGCLL1-206ENST00000428842 RPL28P46779 137 aaKnown RBP6.15□□□□□ -1.42
HMGCLL1-206ENST00000428842 MIR7-3HGQ8N6C7 128 aa6.15□□□□□ -1.42
HMGCLL1-206ENST00000428842 RPL18AQ02543 176 aaKnown RBP6.15□□□□□ -1.43
HMGCLL1-206ENST00000428842 SYCNQ0VAF6 134 aa6.15□□□□□ -1.43
HMGCLL1-206ENST00000428842 GAGE2BQ13066 116 aa6.15□□□□□ -1.43
HMGCLL1-206ENST00000428842 Q8N814 137 aa6.15□□□□□ -1.43
HMGCLL1-206ENST00000428842 KIAA1109Q2LD37 5005 aa6.15□□□□□ -1.43
HMGCLL1-206ENST00000428842 RMI2Q96E14 147 aa6.14□□□□□ -1.43
HMGCLL1-206ENST00000428842 IGKV2-28A0A075B6P5 120 aa6.14□□□□□ -1.43
HMGCLL1-206ENST00000428842 IGKV2D-28P01615 120 aa6.14□□□□□ -1.43
HMGCLL1-206ENST00000428842 LINC00337Q8N6G1 96 aa6.13□□□□□ -1.43
HMGCLL1-206ENST00000428842 FAM218AQ96MZ4 157 aa6.13□□□□□ -1.43
HMGCLL1-206ENST00000428842 C22orf24Q9Y442 160 aa6.13□□□□□ -1.43
HMGCLL1-206ENST00000428842 FAT1Q14517 4588 aa6.13□□□□□ -1.43
HMGCLL1-206ENST00000428842 ANAPC13Q9BS18 74 aa6.13□□□□□ -1.43
HMGCLL1-206ENST00000428842 SND1-IT1Q9HBX3 110 aa6.13□□□□□ -1.43
HMGCLL1-206ENST00000428842 A0A096LNI7 61 aa6.12□□□□□ -1.43
HMGCLL1-206ENST00000428842 ACYP1P07311 99 aa6.12□□□□□ -1.43
HMGCLL1-206ENST00000428842 NDUFV3P56181 108 aaKnown RBP6.11□□□□□ -1.43
HMGCLL1-206ENST00000428842 BAALC-AS2P0C853 105 aa6.11□□□□□ -1.43
HMGCLL1-206ENST00000428842 LINC01561Q8N1V8 128 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms