RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 TCTE3Q8IZS6 198 aa4.44□□□□□ -1.7
ITSN1-216ENST00000428240 TOMM6Q96B49 74 aa4.44□□□□□ -1.7
ITSN1-216ENST00000428240 TIMM17AQ99595 171 aa4.44□□□□□ -1.7
ITSN1-216ENST00000428240 NAT8Q9UHE5 227 aa4.44□□□□□ -1.7
ITSN1-216ENST00000428240 LAMTOR2Q9Y2Q5 125 aa4.44□□□□□ -1.7
ITSN1-216ENST00000428240 SLC25A20O43772 301 aa4.43□□□□□ -1.7
ITSN1-216ENST00000428240 ADCYAP1P18509 176 aa4.43□□□□□ -1.7
ITSN1-216ENST00000428240 MOBPQ13875 183 aa4.43□□□□□ -1.7
ITSN1-216ENST00000428240 LINC00483Q53H64 154 aa4.43□□□□□ -1.7
ITSN1-216ENST00000428240 ATP5L2Q7Z4Y8 100 aa4.43□□□□□ -1.7
ITSN1-216ENST00000428240 SMCR5Q8TEV8 140 aa4.43□□□□□ -1.7
ITSN1-216ENST00000428240 IGLV9-49A0A0B4J1Y8 123 aa4.42□□□□□ -1.7
ITSN1-216ENST00000428240 K7EMI3 77 aa4.42□□□□□ -1.7
ITSN1-216ENST00000428240 ERASQ7Z444 233 aa4.42□□□□□ -1.7
ITSN1-216ENST00000428240 SVIPQ8NHG7 77 aa4.42□□□□□ -1.7
ITSN1-216ENST00000428240 ERG28Q9UKR5 140 aa4.42□□□□□ -1.7
ITSN1-216ENST00000428240 GAGE2AQ6NT46 116 aa4.41□□□□□ -1.7
ITSN1-216ENST00000428240 AKAP14Q86UN6 197 aa4.41□□□□□ -1.7
ITSN1-216ENST00000428240 ZNF625Q96I27 306 aaPredicted RBP4.41□□□□□ -1.7
ITSN1-216ENST00000428240 SCGB3A1Q96QR1 104 aa4.41□□□□□ -1.7
ITSN1-216ENST00000428240 C9orf92A6NGG3 77 aa4.4□□□□□ -1.71
ITSN1-216ENST00000428240 COX17Q14061 63 aa4.4□□□□□ -1.71
ITSN1-216ENST00000428240 SSBP3-AS1Q7Z2R9 100 aa4.4□□□□□ -1.71
ITSN1-216ENST00000428240 CST9LQ9H4G1 147 aa4.4□□□□□ -1.71
ITSN1-216ENST00000428240 NXT2Q9NPJ8 142 aaKnown RBP4.4□□□□□ -1.71
ITSN1-216ENST00000428240 IGLV5-39A0A0G2JS06 123 aa4.39□□□□□ -1.71
ITSN1-216ENST00000428240 TMEM238LA0A1B0GVL6 79 aa4.39□□□□□ -1.71
ITSN1-216ENST00000428240 KRTAP4-16G5E9R7 235 aaPredicted RBP4.39□□□□□ -1.71
ITSN1-216ENST00000428240 SPRR1AP35321 89 aa4.39□□□□□ -1.71
ITSN1-216ENST00000428240 MRPL18Q9H0U6 180 aaKnown RBP4.39□□□□□ -1.71
ITSN1-216ENST00000428240 FCGBPQ9Y6R7 5405 aaPredicted RBP4.38□□□□□ -1.71
ITSN1-216ENST00000428240 PRYO14603 147 aa4.38□□□□□ -1.71
ITSN1-216ENST00000428240 ERC2-IT1O76042 136 aa4.38□□□□□ -1.71
ITSN1-216ENST00000428240 G0S2P27469 103 aa4.38□□□□□ -1.71
ITSN1-216ENST00000428240 H3BRM9 83 aa4.37□□□□□ -1.71
ITSN1-216ENST00000428240 PMVKQ15126 192 aa4.37□□□□□ -1.71
ITSN1-216ENST00000428240 COX6B2Q6YFQ2 88 aa4.37□□□□□ -1.71
ITSN1-216ENST00000428240 A0A0U1RRA0 63 aa4.36□□□□□ -1.71
ITSN1-216ENST00000428240 ETDCA0A1B0GVM5 59 aa4.36□□□□□ -1.71
ITSN1-216ENST00000428240 KCNQ1DNQ9H478 68 aa4.36□□□□□ -1.71
ITSN1-216ENST00000428240 NCR3O14931 201 aa4.35□□□□□ -1.71
ITSN1-216ENST00000428240 IGLC3P0DOY3 106 aa4.35□□□□□ -1.71
ITSN1-216ENST00000428240 ZNF22P17026 224 aaPredicted RBP4.35□□□□□ -1.71
ITSN1-216ENST00000428240 LINC00158P58513 81 aa4.35□□□□□ -1.71
ITSN1-216ENST00000428240 PEA15Q15121 130 aa4.35□□□□□ -1.71
ITSN1-216ENST00000428240 KIAA1644Q3SXP7 199 aa4.35□□□□□ -1.71
ITSN1-216ENST00000428240 TRBV10-3A0A0K0K1G6 114 aa4.34□□□□□ -1.71
ITSN1-216ENST00000428240 B5MCH6 92 aa4.34□□□□□ -1.71
ITSN1-216ENST00000428240 C21orf62-AS1Q17RA5 79 aa4.34□□□□□ -1.71
ITSN1-216ENST00000428240 C9orf153Q5TBE3 101 aa4.34□□□□□ -1.71
ITSN1-216ENST00000428240 Q9BRP9 147 aa4.34□□□□□ -1.71
ITSN1-216ENST00000428240 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
ITSN1-216ENST00000428240 LINC01546A6NGU7 62 aa4.33□□□□□ -1.72
ITSN1-216ENST00000428240 IGLV6-57P01721 117 aa4.33□□□□□ -1.72
ITSN1-216ENST00000428240 BOD1L2Q8IYS8 172 aa4.33□□□□□ -1.72
ITSN1-216ENST00000428240 MACF1Q9UPN3 7388 aaKnown RBP4.32□□□□□ -1.72
ITSN1-216ENST00000428240 HRCT1Q6UXD1 115 aa4.32□□□□□ -1.72
ITSN1-216ENST00000428240 TRAV9-1A0A075B6T8 112 aa4.31□□□□□ -1.72
ITSN1-216ENST00000428240 LINC01549A6NIU2 74 aa4.31□□□□□ -1.72
ITSN1-216ENST00000428240 SMIM13P0DJ93 91 aa4.31□□□□□ -1.72
ITSN1-216ENST00000428240 NDUFA6P56556 154 aa4.31□□□□□ -1.72
ITSN1-216ENST00000428240 SFTA2Q6UW10 78 aa4.31□□□□□ -1.72
ITSN1-216ENST00000428240 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
ITSN1-216ENST00000428240 C11orf86A6NJI1 115 aa4.3□□□□□ -1.72
ITSN1-216ENST00000428240 RPL37P61927 97 aaKnown RBP4.3□□□□□ -1.72
ITSN1-216ENST00000428240 Q6ZRX8 168 aa4.3□□□□□ -1.72
ITSN1-216ENST00000428240 KRTAP19-1Q8IUB9 90 aa4.3□□□□□ -1.72
ITSN1-216ENST00000428240 ST20-AS1Q8NBB2 130 aa4.3□□□□□ -1.72
ITSN1-216ENST00000428240 A0A096LNJ9 63 aa4.29□□□□□ -1.72
ITSN1-216ENST00000428240 TMEM170BQ5T4T1 132 aa4.29□□□□□ -1.72
ITSN1-216ENST00000428240 MIR7-3HGQ8N6C7 128 aa4.29□□□□□ -1.72
ITSN1-216ENST00000428240 LIMD2Q9BT23 127 aa4.29□□□□□ -1.72
ITSN1-216ENST00000428240 ATP6V1G1O75348 118 aa4.28□□□□□ -1.72
ITSN1-216ENST00000428240 MT-ND4LP03901 98 aa4.28□□□□□ -1.72
ITSN1-216ENST00000428240 CFC1P0CG37 223 aa4.28□□□□□ -1.72
ITSN1-216ENST00000428240 DDTP30046 118 aa4.27□□□□□ -1.73
ITSN1-216ENST00000428240 S100A12P80511 92 aa4.27□□□□□ -1.73
ITSN1-216ENST00000428240 MEIG1Q5JSS6 88 aa4.27□□□□□ -1.73
ITSN1-216ENST00000428240 Q6Q795 121 aa4.27□□□□□ -1.73
ITSN1-216ENST00000428240 FA2HQ7L5A8 372 aa4.27□□□□□ -1.73
ITSN1-216ENST00000428240 BAGE3Q86Y29 109 aa4.26□□□□□ -1.73
ITSN1-216ENST00000428240 SMCO4Q9NRQ5 59 aa4.26□□□□□ -1.73
ITSN1-216ENST00000428240 TMEM223A0PJW6 202 aa4.25□□□□□ -1.73
ITSN1-216ENST00000428240 H7C2G1 150 aa4.25□□□□□ -1.73
ITSN1-216ENST00000428240 LCE2BO14633 110 aa4.25□□□□□ -1.73
ITSN1-216ENST00000428240 PMCHL1Q16048 86 aa4.25□□□□□ -1.73
ITSN1-216ENST00000428240 URB1-AS1Q96HZ7 61 aa4.25□□□□□ -1.73
ITSN1-216ENST00000428240 CHTOPQ9Y3Y2 248 aaKnown RBP4.25□□□□□ -1.73
ITSN1-216ENST00000428240 C1orf195Q5TG92 126 aa4.24□□□□□ -1.73
ITSN1-216ENST00000428240 TRBV10-2A0A0K0K1G8 114 aa4.23□□□□□ -1.73
ITSN1-216ENST00000428240 SPRR1BP22528 89 aa4.23□□□□□ -1.73
ITSN1-216ENST00000428240 JOSD1Q15040 202 aaPredicted RBP4.23□□□□□ -1.73
ITSN1-216ENST00000428240 TRAV23DV6A0A075B6W5 121 aa4.22□□□□□ -1.73
ITSN1-216ENST00000428240 LOC107984156A0A0G2JMH3 177 aa4.22□□□□□ -1.73
ITSN1-216ENST00000428240 HBDP02042 147 aa4.22□□□□□ -1.73
ITSN1-216ENST00000428240 HERV-K104P63124 156 aa4.22□□□□□ -1.73
ITSN1-216ENST00000428240 ARL17AQ8IVW1 177 aa4.22□□□□□ -1.73
ITSN1-216ENST00000428240 C5orf52A6NGY3 159 aa4.21□□□□□ -1.74
ITSN1-216ENST00000428240 ZNF73O43830 326 aaPredicted RBP4.21□□□□□ -1.74
ITSN1-216ENST00000428240 MT2AP02795 61 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms