RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 SVBPQ8N300 66 aa3.53□□□□□ -1.84
LINC00458-201ENST00000423442 CHTOPQ9Y3Y2 248 aaKnown RBP3.53□□□□□ -1.84
LINC00458-201ENST00000423442 TRAPPC1Q9Y5R8 145 aa3.53□□□□□ -1.84
LINC00458-201ENST00000423442 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.52□□□□□ -1.85
LINC00458-201ENST00000423442 ADCYAP1P18509 176 aa3.52□□□□□ -1.85
LINC00458-201ENST00000423442 NDUFA6P56556 154 aa3.52□□□□□ -1.85
LINC00458-201ENST00000423442 RAB5BP61020 215 aa3.52□□□□□ -1.85
LINC00458-201ENST00000423442 Q6ZRP5 223 aa3.52□□□□□ -1.85
LINC00458-201ENST00000423442 LINC01561Q8N1V8 128 aa3.52□□□□□ -1.85
LINC00458-201ENST00000423442 TOMM6Q96B49 74 aa3.52□□□□□ -1.85
LINC00458-201ENST00000423442 TIMM17AQ99595 171 aa3.52□□□□□ -1.85
LINC00458-201ENST00000423442 TOMM7Q9P0U1 55 aa3.52□□□□□ -1.85
LINC00458-201ENST00000423442 A0A0J9YXV3 536 aa3.51□□□□□ -1.85
LINC00458-201ENST00000423442 TRBV30A0A0K0K1B3 111 aa3.51□□□□□ -1.85
LINC00458-201ENST00000423442 IGIPA6NJ69 53 aa3.51□□□□□ -1.85
LINC00458-201ENST00000423442 UBE2D1P51668 147 aa3.51□□□□□ -1.85
LINC00458-201ENST00000423442 C10orf91Q5T1B1 145 aa3.51□□□□□ -1.85
LINC00458-201ENST00000423442 UNQ6190/PRO20217Q6UXQ8 127 aa3.51□□□□□ -1.85
LINC00458-201ENST00000423442 AMELXQ99217 191 aa3.51□□□□□ -1.85
LINC00458-201ENST00000423442 MRPL35Q9NZE8 188 aaKnown RBP3.51□□□□□ -1.85
LINC00458-201ENST00000423442 CARHSP1Q9Y2V2 147 aaKnown RBP3.51□□□□□ -1.85
LINC00458-201ENST00000423442 A0A087X002 238 aa3.5□□□□□ -1.85
LINC00458-201ENST00000423442 H3BRM9 83 aa3.5□□□□□ -1.85
LINC00458-201ENST00000423442 LINC00614P0C842 121 aa3.5□□□□□ -1.85
LINC00458-201ENST00000423442 MT1HL1P0DM35 61 aa3.5□□□□□ -1.85
LINC00458-201ENST00000423442 PMVKQ15126 192 aa3.5□□□□□ -1.85
LINC00458-201ENST00000423442 C9orf116Q5BN46 136 aaPredicted RBP3.5□□□□□ -1.85
LINC00458-201ENST00000423442 REG3GQ6UW15 175 aa3.5□□□□□ -1.85
LINC00458-201ENST00000423442 SPINK6Q6UWN8 80 aa3.5□□□□□ -1.85
LINC00458-201ENST00000423442 LINC00469Q8N7U9 141 aa3.5□□□□□ -1.85
LINC00458-201ENST00000423442 FAM104AQ969W3 186 aa3.5□□□□□ -1.85
LINC00458-201ENST00000423442 CST9LQ9H4G1 147 aa3.5□□□□□ -1.85
LINC00458-201ENST00000423442 TINCRA0A1B0GVN0 87 aa3.49□□□□□ -1.85
LINC00458-201ENST00000423442 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
LINC00458-201ENST00000423442 NDUFC2-KCTD14E9PQ53 114 aa3.49□□□□□ -1.85
LINC00458-201ENST00000423442 HNRNPA3P51991 378 aaKnown RBP3.49□□□□□ -1.85
LINC00458-201ENST00000423442 UBE2BP63146 152 aa3.49□□□□□ -1.85
LINC00458-201ENST00000423442 PDZD11Q5EBL8 140 aa3.49□□□□□ -1.85
LINC00458-201ENST00000423442 C2orf82Q6UX34 121 aa3.49□□□□□ -1.85
LINC00458-201ENST00000423442 Q8IZM0 81 aa3.49□□□□□ -1.85
LINC00458-201ENST00000423442 CDKN2A-AS1Q9UH64 79 aa3.49□□□□□ -1.85
LINC00458-201ENST00000423442 LINC01546A6NGU7 62 aa3.48□□□□□ -1.85
LINC00458-201ENST00000423442 F8VRH5 84 aa3.48□□□□□ -1.85
LINC00458-201ENST00000423442 ATP5LO75964 103 aa3.48□□□□□ -1.85
LINC00458-201ENST00000423442 TLX1NBP0CAT3 122 aa3.48□□□□□ -1.85
LINC00458-201ENST00000423442 CXCL5P42830 114 aa3.48□□□□□ -1.85
LINC00458-201ENST00000423442 PRR3P79522 188 aaKnown RBP3.48□□□□□ -1.85
LINC00458-201ENST00000423442 FAM19A3Q7Z5A8 133 aa3.48□□□□□ -1.85
LINC00458-201ENST00000423442 COX7B2Q8TF08 81 aa3.48□□□□□ -1.85
LINC00458-201ENST00000423442 A0A1W2PNN7 141 aa3.47□□□□□ -1.85
LINC00458-201ENST00000423442 HBDP02042 147 aa3.47□□□□□ -1.85
LINC00458-201ENST00000423442 KIAA0087Q14695 138 aa3.47□□□□□ -1.85
LINC00458-201ENST00000423442 C1orf137Q5JT78 98 aa3.47□□□□□ -1.85
LINC00458-201ENST00000423442 LINC00173Q6ZV60 143 aa3.47□□□□□ -1.85
LINC00458-201ENST00000423442 FAM19A5Q7Z5A7 132 aaPredicted RBP3.47□□□□□ -1.85
LINC00458-201ENST00000423442 BAGE3Q86Y29 109 aa3.47□□□□□ -1.85
LINC00458-201ENST00000423442 C6orf48Q9UBA6 75 aa3.47□□□□□ -1.85
LINC00458-201ENST00000423442 FAT4Q6V0I7 4981 aa3.47□□□□□ -1.85
LINC00458-201ENST00000423442 LPAP08519 4548 aa3.46□□□□□ -1.86
LINC00458-201ENST00000423442 RPL13AP40429 203 aaKnown RBP3.46□□□□□ -1.86
LINC00458-201ENST00000423442 TMEM170BQ5T4T1 132 aa3.46□□□□□ -1.86
LINC00458-201ENST00000423442 PHF5AQ7RTV0 110 aaKnown RBP3.46□□□□□ -1.86
LINC00458-201ENST00000423442 C18orf32Q8TCD1 76 aa3.46□□□□□ -1.86
LINC00458-201ENST00000423442 DIRC1Q969H9 104 aa3.46□□□□□ -1.86
LINC00458-201ENST00000423442 CHCHD1Q96BP2 118 aaKnown RBP3.46□□□□□ -1.86
LINC00458-201ENST00000423442 PSORS1C2Q9UIG4 136 aa3.46□□□□□ -1.86
LINC00458-201ENST00000423442 FAM168BA1KXE4 195 aa3.45□□□□□ -1.86
LINC00458-201ENST00000423442 M0QXV9 152 aa3.45□□□□□ -1.86
LINC00458-201ENST00000423442 SPINK8P0C7L1 97 aa3.45□□□□□ -1.86
LINC00458-201ENST00000423442 PFN2P35080 140 aa3.45□□□□□ -1.86
LINC00458-201ENST00000423442 SFTA2Q6UW10 78 aa3.45□□□□□ -1.86
LINC00458-201ENST00000423442 NKAPP1Q8N9T2 125 aa3.45□□□□□ -1.86
LINC00458-201ENST00000423442 LINC01600Q96MT4 127 aa3.45□□□□□ -1.86
LINC00458-201ENST00000423442 HSBP1O75506 76 aa3.44□□□□□ -1.86
LINC00458-201ENST00000423442 IGLV7-43P04211 117 aa3.44□□□□□ -1.86
LINC00458-201ENST00000423442 IGLC3P0DOY3 106 aa3.44□□□□□ -1.86
LINC00458-201ENST00000423442 PMCHL1Q16048 86 aa3.44□□□□□ -1.86
LINC00458-201ENST00000423442 IFI27L1Q96BM0 104 aa3.44□□□□□ -1.86
LINC00458-201ENST00000423442 XAGE1AQ9HD64 81 aa3.44□□□□□ -1.86
LINC00458-201ENST00000423442 C22orf24Q9Y442 160 aa3.44□□□□□ -1.86
LINC00458-201ENST00000423442 LINC00587B1AMM8 73 aa3.43□□□□□ -1.86
LINC00458-201ENST00000423442 LINC00158P58513 81 aa3.43□□□□□ -1.86
LINC00458-201ENST00000423442 COX17Q14061 63 aa3.43□□□□□ -1.86
LINC00458-201ENST00000423442 C9orf129Q5T035 196 aaKnown RBP3.43□□□□□ -1.86
LINC00458-201ENST00000423442 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
LINC00458-201ENST00000423442 SLC7A5P1Q8MH63 180 aa3.43□□□□□ -1.86
LINC00458-201ENST00000423442 MUC2Q02817 5179 aa3.43□□□□□ -1.86
LINC00458-201ENST00000423442 NUPR1O60356 82 aa3.42□□□□□ -1.86
LINC00458-201ENST00000423442 TRGC2P03986 189 aa3.42□□□□□ -1.86
LINC00458-201ENST00000423442 RPL28P46779 137 aaKnown RBP3.42□□□□□ -1.86
LINC00458-201ENST00000423442 MRPL55Q7Z7F7 128 aaKnown RBP3.42□□□□□ -1.86
LINC00458-201ENST00000423442 TP73-AS1Q9UF72 201 aa3.42□□□□□ -1.86
LINC00458-201ENST00000423442 HSPB8Q9UJY1 196 aa3.42□□□□□ -1.86
LINC00458-201ENST00000423442 TRAV12-1A0A0B4J245 112 aa3.41□□□□□ -1.86
LINC00458-201ENST00000423442 RPL37AP8A6NKH3 93 aa3.41□□□□□ -1.86
LINC00458-201ENST00000423442 LEPROTL1O95214 131 aa3.41□□□□□ -1.86
LINC00458-201ENST00000423442 ZNF22P17026 224 aaPredicted RBP3.41□□□□□ -1.86
LINC00458-201ENST00000423442 NDUFV3P56181 108 aaKnown RBP3.41□□□□□ -1.86
LINC00458-201ENST00000423442 S100A12P80511 92 aa3.41□□□□□ -1.86
LINC00458-201ENST00000423442 CBLN2Q8IUK8 224 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 514.9 ms