RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 TRBV30A0A0K0K1B3 111 aa2.61□□□□□ -1.99
CDC42EP3-202ENST00000422687 HMSDA8MTL9 139 aa2.61□□□□□ -1.99
CDC42EP3-202ENST00000422687 A8MWL6 223 aa2.61□□□□□ -1.99
CDC42EP3-202ENST00000422687 MRPS36P82909 103 aaKnown RBP2.61□□□□□ -1.99
CDC42EP3-202ENST00000422687 FAM229BQ4G0N7 80 aa2.61□□□□□ -1.99
CDC42EP3-202ENST00000422687 KRTAP13-1Q8IUC0 172 aa2.61□□□□□ -1.99
CDC42EP3-202ENST00000422687 KRTAP4-1Q9BYQ7 146 aa2.61□□□□□ -1.99
CDC42EP3-202ENST00000422687 TP73-AS1Q9UF72 201 aa2.61□□□□□ -1.99
CDC42EP3-202ENST00000422687 TRBV24-1A0A075B6N3 115 aa2.6□□□□□ -1.99
CDC42EP3-202ENST00000422687 A0A1B0GUT8 65 aa2.6□□□□□ -1.99
CDC42EP3-202ENST00000422687 BCE1O60756 84 aa2.6□□□□□ -1.99
CDC42EP3-202ENST00000422687 PPP1R17O96001 155 aa2.6□□□□□ -1.99
CDC42EP3-202ENST00000422687 FCER1GP30273 86 aa2.6□□□□□ -1.99
CDC42EP3-202ENST00000422687 RPL28P46779 137 aaKnown RBP2.6□□□□□ -1.99
CDC42EP3-202ENST00000422687 ASB16-AS1Q495Z4 193 aa2.6□□□□□ -1.99
CDC42EP3-202ENST00000422687 AMN1Q8IY45 258 aa2.6□□□□□ -1.99
CDC42EP3-202ENST00000422687 TIMM17AQ99595 171 aa2.6□□□□□ -1.99
CDC42EP3-202ENST00000422687 RETNLBQ9BQ08 111 aa2.6□□□□□ -1.99
CDC42EP3-202ENST00000422687 C22orf24Q9Y442 160 aa2.6□□□□□ -1.99
CDC42EP3-202ENST00000422687 KANTRA0A1W2PQU2 76 aa2.59□□□□□ -1.99
CDC42EP3-202ENST00000422687 SMLR1H3BR10 107 aa2.59□□□□□ -1.99
CDC42EP3-202ENST00000422687 TCAPO15273 167 aa2.59□□□□□ -1.99
CDC42EP3-202ENST00000422687 GATCO43716 136 aaKnown RBP2.59□□□□□ -1.99
CDC42EP3-202ENST00000422687 RPL39P62891 51 aaKnown RBP2.59□□□□□ -1.99
CDC42EP3-202ENST00000422687 C2orf82Q6UX34 121 aa2.59□□□□□ -1.99
CDC42EP3-202ENST00000422687 LINC00304Q8N9R0 145 aa2.59□□□□□ -1.99
CDC42EP3-202ENST00000422687 PACRGQ96M98 296 aaPredicted RBP2.59□□□□□ -1.99
CDC42EP3-202ENST00000422687 C20orf78Q9BR46 151 aa2.59□□□□□ -1.99
CDC42EP3-202ENST00000422687 SPANXA1Q9NS26 97 aa2.59□□□□□ -1.99
CDC42EP3-202ENST00000422687 SMIM26A0A096LP01 95 aa2.58□□□□□ -2
CDC42EP3-202ENST00000422687 TGIF2-C20orf24A0A0A6YYL0 155 aa2.58□□□□□ -2
CDC42EP3-202ENST00000422687 ZNF727A8MUV8 499 aa2.58□□□□□ -2
CDC42EP3-202ENST00000422687 HIGD1CA8MV81 97 aa2.58□□□□□ -2
CDC42EP3-202ENST00000422687 TMEM250H0YL14 139 aa2.58□□□□□ -2
CDC42EP3-202ENST00000422687 RPL23P62829 140 aaKnown RBP2.58□□□□□ -2
CDC42EP3-202ENST00000422687 HBBP68871 147 aa2.58□□□□□ -2
CDC42EP3-202ENST00000422687 KRTAP19-2Q3LHN2 52 aa2.58□□□□□ -2
CDC42EP3-202ENST00000422687 KRTAP13-3Q3SY46 172 aa2.58□□□□□ -2
CDC42EP3-202ENST00000422687 FP248Q71RG6 208 aaPredicted RBP2.58□□□□□ -2
CDC42EP3-202ENST00000422687 V9GYY9 64 aa2.58□□□□□ -2
CDC42EP3-202ENST00000422687 LINC00862A6NCI5 91 aa2.57□□□□□ -2
CDC42EP3-202ENST00000422687 MRPL51Q4U2R6 128 aaKnown RBP2.57□□□□□ -2
CDC42EP3-202ENST00000422687 FAM104BQ5XKR9 115 aa2.57□□□□□ -2
CDC42EP3-202ENST00000422687 LINC01551Q86U37 167 aa2.57□□□□□ -2
CDC42EP3-202ENST00000422687 LINC00469Q8N7U9 141 aa2.57□□□□□ -2
CDC42EP3-202ENST00000422687 BORCS7Q96B45 105 aa2.57□□□□□ -2
CDC42EP3-202ENST00000422687 LINC00167Q96N53 147 aa2.57□□□□□ -2
CDC42EP3-202ENST00000422687 SMIM2Q9BVW6 85 aa2.57□□□□□ -2
CDC42EP3-202ENST00000422687 OSTCQ9NRP0 149 aa2.57□□□□□ -2
CDC42EP3-202ENST00000422687 BPY2O14599 106 aa2.56□□□□□ -2
CDC42EP3-202ENST00000422687 S100A6P06703 90 aa2.56□□□□□ -2
CDC42EP3-202ENST00000422687 TAL2Q16559 108 aa2.56□□□□□ -2
CDC42EP3-202ENST00000422687 DEFB116Q30KQ4 102 aa2.56□□□□□ -2
CDC42EP3-202ENST00000422687 Q5W150 140 aa2.56□□□□□ -2
CDC42EP3-202ENST00000422687 SPAG11AQ6PDA7 123 aa2.56□□□□□ -2
CDC42EP3-202ENST00000422687 FAM19A3Q7Z5A8 133 aa2.56□□□□□ -2
CDC42EP3-202ENST00000422687 Q8IZM0 81 aa2.56□□□□□ -2
CDC42EP3-202ENST00000422687 XAGE1AQ9HD64 81 aa2.56□□□□□ -2
CDC42EP3-202ENST00000422687 V9GYV3 84 aa2.56□□□□□ -2
CDC42EP3-202ENST00000422687 IGKV2D-26A0A0A0MRZ7 120 aa2.55□□□□□ -2
CDC42EP3-202ENST00000422687 MT1HP80294 61 aa2.55□□□□□ -2
CDC42EP3-202ENST00000422687 AMELXQ99217 191 aa2.55□□□□□ -2
CDC42EP3-202ENST00000422687 FLGP20930 4061 aaPredicted RBP2.55□□□□□ -2
CDC42EP3-202ENST00000422687 A0A1B0GW15 77 aa2.54□□□□□ -2
CDC42EP3-202ENST00000422687 SMIM27A0A1W2PRY6 76 aa2.54□□□□□ -2
CDC42EP3-202ENST00000422687 TMEM223A0PJW6 202 aa2.54□□□□□ -2
CDC42EP3-202ENST00000422687 HSBP1L1C9JCN9 74 aa2.54□□□□□ -2
CDC42EP3-202ENST00000422687 F8VRH5 84 aa2.54□□□□□ -2
CDC42EP3-202ENST00000422687 PSPHP1O15172 72 aa2.54□□□□□ -2
CDC42EP3-202ENST00000422687 NPYP01303 97 aa2.54□□□□□ -2
CDC42EP3-202ENST00000422687 CKS2P33552 79 aa2.54□□□□□ -2
CDC42EP3-202ENST00000422687 IFI27P40305 119 aaPredicted RBP2.54□□□□□ -2
CDC42EP3-202ENST00000422687 CKS1BP61024 79 aa2.54□□□□□ -2
CDC42EP3-202ENST00000422687 C3orf22Q8N5N4 141 aa2.54□□□□□ -2
CDC42EP3-202ENST00000422687 LINC00337Q8N6G1 96 aa2.54□□□□□ -2
CDC42EP3-202ENST00000422687 PLEKHB2Q96CS7 222 aa2.54□□□□□ -2
CDC42EP3-202ENST00000422687 TMEM141Q96I45 108 aa2.54□□□□□ -2
CDC42EP3-202ENST00000422687 EIF5A2Q9GZV4 153 aaKnown RBP2.54□□□□□ -2
CDC42EP3-202ENST00000422687 A0A1B0GXF2 115 aa2.53□□□□□ -2
CDC42EP3-202ENST00000422687 D6R8Y8 96 aa2.53□□□□□ -2
CDC42EP3-202ENST00000422687 PPBPP02775 128 aa2.53□□□□□ -2
CDC42EP3-202ENST00000422687 RGS21Q2M5E4 152 aa2.53□□□□□ -2
CDC42EP3-202ENST00000422687 Q6ZVH6 145 aa2.53□□□□□ -2
CDC42EP3-202ENST00000422687 FAM19A1Q7Z5A9 133 aa2.53□□□□□ -2
CDC42EP3-202ENST00000422687 SLC51BQ86UW2 128 aa2.53□□□□□ -2
CDC42EP3-202ENST00000422687 Q8N9L7 120 aa2.53□□□□□ -2
CDC42EP3-202ENST00000422687 SMIM7Q9BQ49 75 aa2.53□□□□□ -2
CDC42EP3-202ENST00000422687 NAT8BQ9UHF3 227 aa2.53□□□□□ -2
CDC42EP3-202ENST00000422687 SSPOA2VEC9 5147 aa2.53□□□□□ -2
CDC42EP3-202ENST00000422687 IGIPA6NJ69 53 aa2.52□□□□□ -2.01
CDC42EP3-202ENST00000422687 C6orf99Q4VX62 202 aa2.52□□□□□ -2.01
CDC42EP3-202ENST00000422687 SLC7A5P1Q8MH63 180 aa2.52□□□□□ -2.01
CDC42EP3-202ENST00000422687 C2orf88Q9BSF0 95 aa2.52□□□□□ -2.01
CDC42EP3-202ENST00000422687 GNB1LQ9BYB4 327 aa2.52□□□□□ -2.01
CDC42EP3-202ENST00000422687 TMEM126AQ9H061 195 aa2.52□□□□□ -2.01
CDC42EP3-202ENST00000422687 BATF3Q9NR55 127 aa2.52□□□□□ -2.01
CDC42EP3-202ENST00000422687 C8orf17Q9NRJ1 99 aa2.52□□□□□ -2.01
CDC42EP3-202ENST00000422687 TOMM7Q9P0U1 55 aa2.52□□□□□ -2.01
CDC42EP3-202ENST00000422687 CDKN2A-AS1Q9UH64 79 aa2.52□□□□□ -2.01
CDC42EP3-202ENST00000422687 USH2AO75445 5202 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms