RNA–Protein interactions for RNA: ENST00000422395.1

CCR9-204, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-204ENST00000422395 A0A087WVE0 104 aa4.9□□□□□ -1.63
CCR9-204ENST00000422395 OXTP01178 125 aa4.9□□□□□ -1.63
CCR9-204ENST00000422395 IGKV3-20P01619 116 aa4.9□□□□□ -1.63
CCR9-204ENST00000422395 C20orf197Q8N268 126 aa4.9□□□□□ -1.63
CCR9-204ENST00000422395 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.9□□□□□ -1.63
CCR9-204ENST00000422395 A0A0U1RRA0 63 aa4.89□□□□□ -1.63
CCR9-204ENST00000422395 H3BUX3 64 aa4.89□□□□□ -1.63
CCR9-204ENST00000422395 H7BZZ5 65 aa4.89□□□□□ -1.63
CCR9-204ENST00000422395 NCR3O14931 201 aa4.89□□□□□ -1.63
CCR9-204ENST00000422395 HOXD3P31249 432 aaPredicted RBP4.89□□□□□ -1.63
CCR9-204ENST00000422395 CCL18P55774 89 aa4.89□□□□□ -1.63
CCR9-204ENST00000422395 COX17Q14061 63 aa4.89□□□□□ -1.63
CCR9-204ENST00000422395 Q8N814 137 aa4.89□□□□□ -1.63
CCR9-204ENST00000422395 C11orf72Q8NBR9 251 aa4.89□□□□□ -1.63
CCR9-204ENST00000422395 CYSTM1Q9H1C7 97 aa4.89□□□□□ -1.63
CCR9-204ENST00000422395 ARHGAP32A7KAX9 2087 aa4.88□□□□□ -1.63
CCR9-204ENST00000422395 VWFP04275 2813 aa4.88□□□□□ -1.63
CCR9-204ENST00000422395 CMYA5Q8N3K9 4069 aa4.88□□□□□ -1.63
CCR9-204ENST00000422395 TRAV23DV6A0A075B6W5 121 aa4.88□□□□□ -1.63
CCR9-204ENST00000422395 A0A087WZ39 114 aa4.88□□□□□ -1.63
CCR9-204ENST00000422395 IGHV4-38-2P0DP08 117 aa4.88□□□□□ -1.63
CCR9-204ENST00000422395 CMC4P56277 68 aaPredicted RBP4.88□□□□□ -1.63
CCR9-204ENST00000422395 PROK1P58294 105 aa4.88□□□□□ -1.63
CCR9-204ENST00000422395 ENHOQ6UWT2 76 aa4.88□□□□□ -1.63
CCR9-204ENST00000422395 Q6ZSN1 163 aa4.88□□□□□ -1.63
CCR9-204ENST00000422395 UBE2E2Q96LR5 201 aa4.88□□□□□ -1.63
CCR9-204ENST00000422395 IGHV3-38A0A0C4DH36 116 aa4.87□□□□□ -1.63
CCR9-204ENST00000422395 B4DSR2 109 aa4.87□□□□□ -1.63
CCR9-204ENST00000422395 RBM3P98179 157 aaKnown RBP4.87□□□□□ -1.63
CCR9-204ENST00000422395 IL17DQ8TAD2 202 aa4.87□□□□□ -1.63
CCR9-204ENST00000422395 DYNLRB2Q8TF09 96 aa4.87□□□□□ -1.63
CCR9-204ENST00000422395 J3QLI3 93 aa4.86□□□□□ -1.63
CCR9-204ENST00000422395 DEFB131AP59861 70 aa4.86□□□□□ -1.63
CCR9-204ENST00000422395 LY6EQ16553 131 aa4.86□□□□□ -1.63
CCR9-204ENST00000422395 C9orf66Q5T8R8 295 aa4.86□□□□□ -1.63
CCR9-204ENST00000422395 Q8IZM0 81 aa4.86□□□□□ -1.63
CCR9-204ENST00000422395 C1orf43Q9BWL3 253 aa4.86□□□□□ -1.63
CCR9-204ENST00000422395 PRKDCP78527 4128 aaKnown RBP4.85□□□□□ -1.63
CCR9-204ENST00000422395 MSMBP08118 114 aa4.85□□□□□ -1.63
CCR9-204ENST00000422395 HTN1P15515 57 aa4.85□□□□□ -1.63
CCR9-204ENST00000422395 SS18Q15532 418 aa4.85□□□□□ -1.63
CCR9-204ENST00000422395 Q6ZQT0 140 aa4.85□□□□□ -1.63
CCR9-204ENST00000422395 LINC00336Q6ZUF6 198 aa4.85□□□□□ -1.63
CCR9-204ENST00000422395 C6orf223Q8N319 242 aa4.85□□□□□ -1.63
CCR9-204ENST00000422395 V9GYY9 64 aa4.85□□□□□ -1.63
CCR9-204ENST00000422395 WNK1Q9H4A3 2382 aa4.84□□□□□ -1.63
CCR9-204ENST00000422395 IGHV3OR16-9A0A0B4J2B5 98 aa4.84□□□□□ -1.63
CCR9-204ENST00000422395 IGHV4-59P01825 116 aa4.84□□□□□ -1.63
CCR9-204ENST00000422395 C6orf226Q5I0X4 101 aa4.84□□□□□ -1.63
CCR9-204ENST00000422395 C9orf129Q5T035 196 aaKnown RBP4.84□□□□□ -1.63
CCR9-204ENST00000422395 TOMM7Q9P0U1 55 aa4.84□□□□□ -1.63
CCR9-204ENST00000422395 TRGV1A0A0A0MS02 117 aa4.83□□□□□ -1.64
CCR9-204ENST00000422395 TRBV7-6A0A0J9YX20 115 aa4.83□□□□□ -1.64
CCR9-204ENST00000422395 MIFP14174 115 aa4.83□□□□□ -1.64
CCR9-204ENST00000422395 LINC01547P58512 204 aaPredicted RBP4.83□□□□□ -1.64
CCR9-204ENST00000422395 HILS1P60008 231 aa4.83□□□□□ -1.64
CCR9-204ENST00000422395 BRD3OSQ6XYD6 125 aa4.83□□□□□ -1.64
CCR9-204ENST00000422395 NTM-AS1Q6ZSK4 140 aa4.83□□□□□ -1.64
CCR9-204ENST00000422395 FAM19A1Q7Z5A9 133 aa4.83□□□□□ -1.64
CCR9-204ENST00000422395 C11orf68Q9H3H3 251 aaKnown RBP4.83□□□□□ -1.64
CCR9-204ENST00000422395 MAP6D1Q9H9H5 199 aa4.83□□□□□ -1.64
CCR9-204ENST00000422395 F8WEM9 126 aa4.82□□□□□ -1.64
CCR9-204ENST00000422395 C1orf195Q5TG92 126 aa4.82□□□□□ -1.64
CCR9-204ENST00000422395 LINC00575Q6W349 94 aa4.82□□□□□ -1.64
CCR9-204ENST00000422395 C16orf74Q96GX8 76 aa4.82□□□□□ -1.64
CCR9-204ENST00000422395 C16orf95Q9H693 158 aa4.82□□□□□ -1.64
CCR9-204ENST00000422395 IGHV4-28A0A0C4DH34 117 aa4.81□□□□□ -1.64
CCR9-204ENST00000422395 A0A1B0GW54 56 aa4.81□□□□□ -1.64
CCR9-204ENST00000422395 EDN2P20800 178 aa4.81□□□□□ -1.64
CCR9-204ENST00000422395 Q6ZVQ6 151 aa4.81□□□□□ -1.64
CCR9-204ENST00000422395 STHQ8IWL8 128 aa4.81□□□□□ -1.64
CCR9-204ENST00000422395 NACAE9PAV3 2078 aa4.81□□□□□ -1.64
CCR9-204ENST00000422395 TRBV6-8A0A0A6YYG3 113 aa4.8□□□□□ -1.64
CCR9-204ENST00000422395 TRBV7-4A0A0J9YYF1 115 aa4.8□□□□□ -1.64
CCR9-204ENST00000422395 A0A1B0GUV1 79 aa4.8□□□□□ -1.64
CCR9-204ENST00000422395 CCL24O00175 119 aa4.8□□□□□ -1.64
CCR9-204ENST00000422395 HAMPP81172 84 aa4.8□□□□□ -1.64
CCR9-204ENST00000422395 DEFB114Q30KQ6 69 aa4.8□□□□□ -1.64
CCR9-204ENST00000422395 KHDC1LQ5JSQ8 128 aa4.8□□□□□ -1.64
CCR9-204ENST00000422395 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.8□□□□□ -1.64
CCR9-204ENST00000422395 FP248Q71RG6 208 aaPredicted RBP4.8□□□□□ -1.64
CCR9-204ENST00000422395 WWC2-AS2Q96NR7 200 aa4.8□□□□□ -1.64
CCR9-204ENST00000422395 Q9UF83 564 aa4.8□□□□□ -1.64
CCR9-204ENST00000422395 LINC00959A0A1B0GUT2 108 aa4.79□□□□□ -1.64
CCR9-204ENST00000422395 RPL35AP18077 110 aaKnown RBP4.79□□□□□ -1.64
CCR9-204ENST00000422395 NREPQ16612 68 aa4.79□□□□□ -1.64
CCR9-204ENST00000422395 TMEM254Q8TBM7 123 aa4.79□□□□□ -1.64
CCR9-204ENST00000422395 C4orf3Q8WVX3 66 aa4.79□□□□□ -1.64
CCR9-204ENST00000422395 ESM1Q9NQ30 184 aa4.79□□□□□ -1.64
CCR9-204ENST00000422395 PLAC8L1A1L4L8 177 aa4.78□□□□□ -1.64
CCR9-204ENST00000422395 SEC61GP60059 68 aa4.78□□□□□ -1.64
CCR9-204ENST00000422395 ESRGQ1W209 222 aa4.78□□□□□ -1.64
CCR9-204ENST00000422395 C1orf158Q8N1D5 194 aa4.78□□□□□ -1.64
CCR9-204ENST00000422395 FAM30AQ9NZY2 134 aa4.78□□□□□ -1.64
CCR9-204ENST00000422395 TRGV2A0A075B6R0 118 aa4.77□□□□□ -1.65
CCR9-204ENST00000422395 TRGV4A0A0C4DH28 118 aa4.77□□□□□ -1.65
CCR9-204ENST00000422395 DNAJC9-AS1A6NH13 148 aa4.77□□□□□ -1.65
CCR9-204ENST00000422395 PRYO14603 147 aa4.77□□□□□ -1.65
CCR9-204ENST00000422395 FUSP35637 526 aaKnown RBP eCLIP4.77□□□□□ -1.65
CCR9-204ENST00000422395 NANOS2P60321 138 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms