RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 SMIM26A0A096LP01 95 aa5.86□□□□□ -1.47
UBR4-206ENST00000419533 FAM30AQ9NZY2 134 aa5.86□□□□□ -1.47
UBR4-206ENST00000419533 SNURFQ9Y675 71 aa5.86□□□□□ -1.47
UBR4-206ENST00000419533 PRLHP81277 87 aa5.85□□□□□ -1.47
UBR4-206ENST00000419533 LINC00575Q6W349 94 aa5.85□□□□□ -1.47
UBR4-206ENST00000419533 SMCR5Q8TEV8 140 aa5.85□□□□□ -1.47
UBR4-206ENST00000419533 A0A087WSZ3 146 aa5.84□□□□□ -1.47
UBR4-206ENST00000419533 TRBV7-7A0A0K0K1E9 115 aa5.84□□□□□ -1.47
UBR4-206ENST00000419533 NBDYA0A0U1RRE5 68 aa5.84□□□□□ -1.47
UBR4-206ENST00000419533 FAM229AH3BQW9 127 aa5.84□□□□□ -1.47
UBR4-206ENST00000419533 LINC01546A6NGU7 62 aa5.84□□□□□ -1.47
UBR4-206ENST00000419533 TRAV7A0A075B6U4 112 aa5.84□□□□□ -1.48
UBR4-206ENST00000419533 IGHV3OR16-9A0A0B4J2B5 98 aa5.83□□□□□ -1.48
UBR4-206ENST00000419533 IGLV5-39A0A0G2JS06 123 aa5.83□□□□□ -1.48
UBR4-206ENST00000419533 A0A087WVE0 104 aa5.83□□□□□ -1.48
UBR4-206ENST00000419533 PRO0461Q9UI25 63 aa5.83□□□□□ -1.48
UBR4-206ENST00000419533 MTORP42345 2549 aa5.83□□□□□ -1.48
UBR4-206ENST00000419533 LINC00315P59091 139 aa5.83□□□□□ -1.48
UBR4-206ENST00000419533 C1orf195Q5TG92 126 aa5.83□□□□□ -1.48
UBR4-206ENST00000419533 LINC00337Q8N6G1 96 aa5.83□□□□□ -1.48
UBR4-206ENST00000419533 Q8NAQ8 132 aa5.83□□□□□ -1.48
UBR4-206ENST00000419533 FN1P02751 2386 aaKnown RBP5.82□□□□□ -1.48
UBR4-206ENST00000419533 KRTAP21-3Q3LHN1 58 aa5.82□□□□□ -1.48
UBR4-206ENST00000419533 SMCPP49901 116 aaPredicted RBP5.82□□□□□ -1.48
UBR4-206ENST00000419533 RTL8CO15255 209 aa5.82□□□□□ -1.48
UBR4-206ENST00000419533 KLK9Q2XQG4 91 aa5.82□□□□□ -1.48
UBR4-206ENST00000419533 LINC01547P58512 204 aaPredicted RBP5.81□□□□□ -1.48
UBR4-206ENST00000419533 LINC00208Q96KT6 92 aa5.8□□□□□ -1.48
UBR4-206ENST00000419533 AGRNO00468 2067 aa5.8□□□□□ -1.48
UBR4-206ENST00000419533 C16orf90A8MZG2 172 aa5.8□□□□□ -1.48
UBR4-206ENST00000419533 LINC00167Q96N53 147 aa5.8□□□□□ -1.48
UBR4-206ENST00000419533 C6orf48Q9UBA6 75 aa5.8□□□□□ -1.48
UBR4-206ENST00000419533 IGSF10Q6WRI0 2623 aa5.8□□□□□ -1.48
UBR4-206ENST00000419533 PRR4Q16378 134 aa5.8□□□□□ -1.48
UBR4-206ENST00000419533 LINC00588Q9Y4M8 146 aa5.8□□□□□ -1.48
UBR4-206ENST00000419533 CFAP46Q8IYW2 2715 aa5.79□□□□□ -1.48
UBR4-206ENST00000419533 KRTAP10-3P60369 221 aa5.79□□□□□ -1.48
UBR4-206ENST00000419533 PRUNE2Q8WUY3 3088 aa5.79□□□□□ -1.48
UBR4-206ENST00000419533 RETNLBQ9BQ08 111 aa5.79□□□□□ -1.48
UBR4-206ENST00000419533 A8MTW9 85 aa5.79□□□□□ -1.48
UBR4-206ENST00000419533 Q6ZRP5 223 aa5.78□□□□□ -1.48
UBR4-206ENST00000419533 IGLV5-45A0A087WSX0 123 aa5.78□□□□□ -1.48
UBR4-206ENST00000419533 K7EIL1 84 aa5.78□□□□□ -1.48
UBR4-206ENST00000419533 AKAP13Q12802 2813 aa5.78□□□□□ -1.48
UBR4-206ENST00000419533 TRBV7-6A0A0J9YX20 115 aa5.77□□□□□ -1.49
UBR4-206ENST00000419533 HCG22E2RYF7 251 aa5.76□□□□□ -1.49
UBR4-206ENST00000419533 CRYGAP11844 174 aa5.76□□□□□ -1.49
UBR4-206ENST00000419533 KIAA0087Q14695 138 aa5.76□□□□□ -1.49
UBR4-206ENST00000419533 MOBPQ13875 183 aa5.76□□□□□ -1.49
UBR4-206ENST00000419533 LINC00846Q9NV44 126 aa5.76□□□□□ -1.49
UBR4-206ENST00000419533 PLA2G1BP04054 148 aaKnown RBP5.76□□□□□ -1.49
UBR4-206ENST00000419533 DEFB116Q30KQ4 102 aa5.76□□□□□ -1.49
UBR4-206ENST00000419533 GVQW2A0A096LPI5 108 aaPredicted RBP5.76□□□□□ -1.49
UBR4-206ENST00000419533 Q8N3U1 123 aa5.76□□□□□ -1.49
UBR4-206ENST00000419533 DNAH10OSP0CZ25 163 aa5.75□□□□□ -1.49
UBR4-206ENST00000419533 SPACA4Q8TDM5 124 aa5.75□□□□□ -1.49
UBR4-206ENST00000419533 A6NED7 52 aa5.75□□□□□ -1.49
UBR4-206ENST00000419533 H0Y9P7 68 aa5.75□□□□□ -1.49
UBR4-206ENST00000419533 PHF5AQ7RTV0 110 aaKnown RBP5.75□□□□□ -1.49
UBR4-206ENST00000419533 KRTAP10-11P60412 298 aa5.75□□□□□ -1.49
UBR4-206ENST00000419533 CR1P17927 2039 aa5.75□□□□□ -1.49
UBR4-206ENST00000419533 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
UBR4-206ENST00000419533 SOSTDC1Q6X4U4 206 aa5.74□□□□□ -1.49
UBR4-206ENST00000419533 Q8NBF4 154 aa5.74□□□□□ -1.49
UBR4-206ENST00000419533 ELOF1P60002 83 aaKnown RBP5.73□□□□□ -1.49
UBR4-206ENST00000419533 PCOTHQ58A44 107 aa5.73□□□□□ -1.49
UBR4-206ENST00000419533 TYMSOSQ8TAI1 123 aa5.73□□□□□ -1.49
UBR4-206ENST00000419533 A0A1B0GW54 56 aa5.73□□□□□ -1.49
UBR4-206ENST00000419533 C19orf73Q9NVV2 129 aa5.73□□□□□ -1.49
UBR4-206ENST00000419533 CXCL6P80162 114 aa5.72□□□□□ -1.49
UBR4-206ENST00000419533 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
UBR4-206ENST00000419533 SZT2Q5T011 3432 aa5.72□□□□□ -1.49
UBR4-206ENST00000419533 Q6ZRX8 168 aa5.72□□□□□ -1.49
UBR4-206ENST00000419533 ITPR3Q14573 2671 aa5.72□□□□□ -1.49
UBR4-206ENST00000419533 CHD6Q8TD26 2715 aa5.72□□□□□ -1.49
UBR4-206ENST00000419533 EPM2AB3EWF7 344 aa5.72□□□□□ -1.49
UBR4-206ENST00000419533 FLNAP21333 2647 aaKnown RBP5.72□□□□□ -1.49
UBR4-206ENST00000419533 Q9UF83 564 aa5.71□□□□□ -1.5
UBR4-206ENST00000419533 CDH23Q9H251 3354 aa5.71□□□□□ -1.5
UBR4-206ENST00000419533 BCE1O60756 84 aa5.71□□□□□ -1.5
UBR4-206ENST00000419533 TMEM254Q8TBM7 123 aa5.71□□□□□ -1.5
UBR4-206ENST00000419533 CSNK1G2-AS1Q8NCQ2 148 aa5.71□□□□□ -1.5
UBR4-206ENST00000419533 SPINK1P00995 79 aa5.7□□□□□ -1.5
UBR4-206ENST00000419533 RPL37AP61513 92 aaKnown RBP5.7□□□□□ -1.5
UBR4-206ENST00000419533 J3QL48 77 aa5.7□□□□□ -1.5
UBR4-206ENST00000419533 TP53AIP1Q9HCN2 124 aa5.7□□□□□ -1.5
UBR4-206ENST00000419533 IGKV2D-30A0A075B6S6 120 aa5.69□□□□□ -1.5
UBR4-206ENST00000419533 hDV103S1A0JD37 113 aa5.69□□□□□ -1.5
UBR4-206ENST00000419533 IGKV2-30P06310 120 aa5.69□□□□□ -1.5
UBR4-206ENST00000419533 CHTF8P0CG12 524 aa5.69□□□□□ -1.5
UBR4-206ENST00000419533 PMAIP1Q13794 54 aa5.69□□□□□ -1.5
UBR4-206ENST00000419533 TM2D3Q9BRN9 247 aa5.69□□□□□ -1.5
UBR4-206ENST00000419533 COL6A3P12111 3177 aa5.68□□□□□ -1.5
UBR4-206ENST00000419533 UNC79Q9P2D8 2635 aa5.68□□□□□ -1.5
UBR4-206ENST00000419533 C1orf64Q8NEQ6 169 aa5.67□□□□□ -1.5
UBR4-206ENST00000419533 BPTFQ12830 3046 aa5.67□□□□□ -1.5
UBR4-206ENST00000419533 LINC00476Q8WZB0 136 aa5.67□□□□□ -1.5
UBR4-206ENST00000419533 SETD2Q9BYW2 2564 aaPredicted RBP5.67□□□□□ -1.5
UBR4-206ENST00000419533 A0A0C4DFX4 3053 aa5.67□□□□□ -1.5
UBR4-206ENST00000419533 C7orf65Q6ZTY9 151 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms