RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 PMVKQ15126 192 aa4.28□□□□□ -1.72
HMGN1-205ENST00000419378 CBLN2Q8IUK8 224 aa4.28□□□□□ -1.72
HMGN1-205ENST00000419378 Q8IZM0 81 aa4.28□□□□□ -1.72
HMGN1-205ENST00000419378 LINC00469Q8N7U9 141 aa4.28□□□□□ -1.72
HMGN1-205ENST00000419378 CST9LQ9H4G1 147 aa4.28□□□□□ -1.72
HMGN1-205ENST00000419378 TOMM7Q9P0U1 55 aa4.28□□□□□ -1.72
HMGN1-205ENST00000419378 FAM168BA1KXE4 195 aa4.27□□□□□ -1.73
HMGN1-205ENST00000419378 NDUFC2-KCTD14E9PQ53 114 aa4.27□□□□□ -1.73
HMGN1-205ENST00000419378 PMCHL1Q16048 86 aa4.27□□□□□ -1.73
HMGN1-205ENST00000419378 C6orf226Q5I0X4 101 aa4.27□□□□□ -1.73
HMGN1-205ENST00000419378 PHF5AQ7RTV0 110 aaKnown RBP4.27□□□□□ -1.73
HMGN1-205ENST00000419378 F8VRH5 84 aa4.26□□□□□ -1.73
HMGN1-205ENST00000419378 RAB5BP61020 215 aa4.26□□□□□ -1.73
HMGN1-205ENST00000419378 PDZD11Q5EBL8 140 aa4.26□□□□□ -1.73
HMGN1-205ENST00000419378 C9orf129Q5T035 196 aaKnown RBP4.26□□□□□ -1.73
HMGN1-205ENST00000419378 FAM19A5Q7Z5A7 132 aaPredicted RBP4.26□□□□□ -1.73
HMGN1-205ENST00000419378 KRTAP7-1Q8IUC3 87 aa4.26□□□□□ -1.73
HMGN1-205ENST00000419378 SLC7A5P1Q8MH63 180 aa4.26□□□□□ -1.73
HMGN1-205ENST00000419378 M0QXV9 152 aa4.25□□□□□ -1.73
HMGN1-205ENST00000419378 SPINK8P0C7L1 97 aa4.25□□□□□ -1.73
HMGN1-205ENST00000419378 IGLC3P0DOY3 106 aa4.25□□□□□ -1.73
HMGN1-205ENST00000419378 MT3P25713 68 aa4.25□□□□□ -1.73
HMGN1-205ENST00000419378 CXCL5P42830 114 aa4.25□□□□□ -1.73
HMGN1-205ENST00000419378 NDUFA6P56556 154 aa4.25□□□□□ -1.73
HMGN1-205ENST00000419378 Q6ZVQ6 151 aa4.25□□□□□ -1.73
HMGN1-205ENST00000419378 COX7B2Q8TF08 81 aa4.25□□□□□ -1.73
HMGN1-205ENST00000419378 PSORS1C2Q9UIG4 136 aa4.25□□□□□ -1.73
HMGN1-205ENST00000419378 H3BRM9 83 aa4.24□□□□□ -1.73
HMGN1-205ENST00000419378 ATP5LO75964 103 aa4.24□□□□□ -1.73
HMGN1-205ENST00000419378 MT1HL1P0DM35 61 aa4.24□□□□□ -1.73
HMGN1-205ENST00000419378 SPINK6Q6UWN8 80 aa4.24□□□□□ -1.73
HMGN1-205ENST00000419378 KRTAP11-1Q8IUC1 163 aa4.24□□□□□ -1.73
HMGN1-205ENST00000419378 CHCHD1Q96BP2 118 aaKnown RBP4.24□□□□□ -1.73
HMGN1-205ENST00000419378 XAGE1AQ9HD64 81 aa4.24□□□□□ -1.73
HMGN1-205ENST00000419378 C11orf86A6NJI1 115 aa4.23□□□□□ -1.73
HMGN1-205ENST00000419378 ZNF22P17026 224 aaPredicted RBP4.23□□□□□ -1.73
HMGN1-205ENST00000419378 C1orf137Q5JT78 98 aa4.23□□□□□ -1.73
HMGN1-205ENST00000419378 BAGE3Q86Y29 109 aa4.23□□□□□ -1.73
HMGN1-205ENST00000419378 IGLV7-46A0A075B6I9 117 aa4.22□□□□□ -1.73
HMGN1-205ENST00000419378 HSBP1O75506 76 aa4.22□□□□□ -1.73
HMGN1-205ENST00000419378 TRGC2P03986 189 aa4.22□□□□□ -1.73
HMGN1-205ENST00000419378 UBE2BP63146 152 aa4.22□□□□□ -1.73
HMGN1-205ENST00000419378 LINC01600Q96MT4 127 aa4.22□□□□□ -1.73
HMGN1-205ENST00000419378 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
HMGN1-205ENST00000419378 IGLV7-43P04211 117 aa4.21□□□□□ -1.74
HMGN1-205ENST00000419378 REG3GQ6UW15 175 aa4.21□□□□□ -1.74
HMGN1-205ENST00000419378 IFI27L1Q96BM0 104 aa4.21□□□□□ -1.74
HMGN1-205ENST00000419378 CHTOPQ9Y3Y2 248 aaKnown RBP4.21□□□□□ -1.74
HMGN1-205ENST00000419378 TRAV12-1A0A0B4J245 112 aa4.2□□□□□ -1.74
HMGN1-205ENST00000419378 COLCA2A8K830 154 aa4.2□□□□□ -1.74
HMGN1-205ENST00000419378 SERF1AO75920 110 aa4.2□□□□□ -1.74
HMGN1-205ENST00000419378 TMEM170BQ5T4T1 132 aa4.2□□□□□ -1.74
HMGN1-205ENST00000419378 FAM19A2Q8N3H0 131 aa4.2□□□□□ -1.74
HMGN1-205ENST00000419378 TP73-AS1Q9UF72 201 aa4.2□□□□□ -1.74
HMGN1-205ENST00000419378 C22orf24Q9Y442 160 aa4.2□□□□□ -1.74
HMGN1-205ENST00000419378 TMEM223A0PJW6 202 aa4.19□□□□□ -1.74
HMGN1-205ENST00000419378 PFN2P35080 140 aa4.19□□□□□ -1.74
HMGN1-205ENST00000419378 MRPL55Q7Z7F7 128 aaKnown RBP4.19□□□□□ -1.74
HMGN1-205ENST00000419378 DIRC1Q969H9 104 aa4.19□□□□□ -1.74
HMGN1-205ENST00000419378 ERG28Q9UKR5 140 aa4.19□□□□□ -1.74
HMGN1-205ENST00000419378 LRP2P98164 4655 aa4.18□□□□□ -1.74
HMGN1-205ENST00000419378 H0Y9J4 135 aa4.18□□□□□ -1.74
HMGN1-205ENST00000419378 NUPR1O60356 82 aa4.18□□□□□ -1.74
HMGN1-205ENST00000419378 SFTA2Q6UW10 78 aa4.18□□□□□ -1.74
HMGN1-205ENST00000419378 ZNF625Q96I27 306 aaPredicted RBP4.18□□□□□ -1.74
HMGN1-205ENST00000419378 H0Y8G0 127 aa4.17□□□□□ -1.74
HMGN1-205ENST00000419378 SCO1O75880 301 aa4.17□□□□□ -1.74
HMGN1-205ENST00000419378 LEPROTL1O95214 131 aa4.17□□□□□ -1.74
HMGN1-205ENST00000419378 KRTAP10-8P60410 259 aa4.17□□□□□ -1.74
HMGN1-205ENST00000419378 NKAPP1Q8N9T2 125 aa4.17□□□□□ -1.74
HMGN1-205ENST00000419378 LINC00167Q96N53 147 aa4.17□□□□□ -1.74
HMGN1-205ENST00000419378 SND1-IT1Q9HBX3 110 aa4.17□□□□□ -1.74
HMGN1-205ENST00000419378 UBR4Q5T4S7 5183 aa4.17□□□□□ -1.74
HMGN1-205ENST00000419378 NDUFAF8A1L188 74 aa4.16□□□□□ -1.74
HMGN1-205ENST00000419378 RPL37AP8A6NKH3 93 aa4.16□□□□□ -1.74
HMGN1-205ENST00000419378 ATP6V1G1O75348 118 aa4.16□□□□□ -1.74
HMGN1-205ENST00000419378 COX17Q14061 63 aa4.16□□□□□ -1.74
HMGN1-205ENST00000419378 Q8NBF4 154 aa4.16□□□□□ -1.74
HMGN1-205ENST00000419378 HSPB8Q9UJY1 196 aa4.16□□□□□ -1.74
HMGN1-205ENST00000419378 ZNF861PO60384 105 aa4.15□□□□□ -1.75
HMGN1-205ENST00000419378 BCE1O60756 84 aa4.15□□□□□ -1.75
HMGN1-205ENST00000419378 KRTAP1-4P0C5Y4 121 aa4.15□□□□□ -1.75
HMGN1-205ENST00000419378 FABP4P15090 132 aa4.15□□□□□ -1.75
HMGN1-205ENST00000419378 PLNP26678 52 aa4.15□□□□□ -1.75
HMGN1-205ENST00000419378 Q8NDZ9 215 aa4.15□□□□□ -1.75
HMGN1-205ENST00000419378 IGKV2-28A0A075B6P5 120 aa4.14□□□□□ -1.75
HMGN1-205ENST00000419378 A0A0U1RRA0 63 aa4.14□□□□□ -1.75
HMGN1-205ENST00000419378 HIST1H2BKO60814 126 aa4.14□□□□□ -1.75
HMGN1-205ENST00000419378 DPM2O94777 84 aa4.14□□□□□ -1.75
HMGN1-205ENST00000419378 IGKV2D-28P01615 120 aa4.14□□□□□ -1.75
HMGN1-205ENST00000419378 HIST1H2BJP06899 126 aa4.14□□□□□ -1.75
HMGN1-205ENST00000419378 HIST1H2BOP23527 126 aa4.14□□□□□ -1.75
HMGN1-205ENST00000419378 HIST1H2BBP33778 126 aa4.14□□□□□ -1.75
HMGN1-205ENST00000419378 LINC00158P58513 81 aa4.14□□□□□ -1.75
HMGN1-205ENST00000419378 HIST1H2BDP58876 126 aa4.14□□□□□ -1.75
HMGN1-205ENST00000419378 TSPEAR-AS2P59090 65 aa4.14□□□□□ -1.75
HMGN1-205ENST00000419378 HIST1H2BCP62807 126 aa4.14□□□□□ -1.75
HMGN1-205ENST00000419378 HERV-K104P63124 156 aa4.14□□□□□ -1.75
HMGN1-205ENST00000419378 HIST2H2BEQ16778 126 aa4.14□□□□□ -1.75
HMGN1-205ENST00000419378 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms