RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 Q6ZRU5 148 aa13.65□□□□□ -0.22
CASC3-203ENST00000418132 PSCAO43653 123 aa13.64□□□□□ -0.23
CASC3-203ENST00000418132 RPL13AP40429 203 aaKnown RBP13.63□□□□□ -0.23
CASC3-203ENST00000418132 Q6ZR54 194 aa13.63□□□□□ -0.23
CASC3-203ENST00000418132 LINC00476Q8WZB0 136 aa13.63□□□□□ -0.23
CASC3-203ENST00000418132 M0R2N4 97 aa13.63□□□□□ -0.23
CASC3-203ENST00000418132 Q6ZRN7 208 aaPredicted RBP13.63□□□□□ -0.23
CASC3-203ENST00000418132 LECT2O14960 151 aa13.62□□□□□ -0.23
CASC3-203ENST00000418132 LY6G6CO95867 125 aa13.62□□□□□ -0.23
CASC3-203ENST00000418132 SYCNQ0VAF6 134 aa13.62□□□□□ -0.23
CASC3-203ENST00000418132 SLPIP03973 132 aa13.6□□□□□ -0.23
CASC3-203ENST00000418132 VPS25Q9BRG1 176 aa13.6□□□□□ -0.23
CASC3-203ENST00000418132 ATXN8Q156A1 80 aa13.58□□□□□ -0.24
CASC3-203ENST00000418132 COX6CP09669 75 aa13.58□□□□□ -0.24
CASC3-203ENST00000418132 CBY1Q9Y3M2 126 aa13.58□□□□□ -0.24
CASC3-203ENST00000418132 CARD19Q96LW7 228 aa13.57□□□□□ -0.24
CASC3-203ENST00000418132 SND1-IT1Q9HBX3 110 aa13.57□□□□□ -0.24
CASC3-203ENST00000418132 DNAH10Q8IVF4 4471 aa13.57□□□□□ -0.24
CASC3-203ENST00000418132 LRCOL1A6NCL2 159 aa13.55□□□□□ -0.24
CASC3-203ENST00000418132 C9JAW5 83 aa13.55□□□□□ -0.24
CASC3-203ENST00000418132 C14orf177Q52M58 125 aa13.54□□□□□ -0.24
CASC3-203ENST00000418132 NDUFC2-KCTD14E9PQ53 114 aa13.54□□□□□ -0.24
CASC3-203ENST00000418132 SLC25A20O43772 301 aa13.53□□□□□ -0.24
CASC3-203ENST00000418132 LINC01620Q4KN68 170 aa13.53□□□□□ -0.24
CASC3-203ENST00000418132 CLEC2BQ92478 149 aa13.53□□□□□ -0.24
CASC3-203ENST00000418132 ALMS1Q8TCU4 4167 aa13.52□□□□□ -0.25
CASC3-203ENST00000418132 IGKV2-28A0A075B6P5 120 aa13.51□□□□□ -0.25
CASC3-203ENST00000418132 IGKV2D-28P01615 120 aa13.51□□□□□ -0.25
CASC3-203ENST00000418132 TLX1NBP0CAT3 122 aa13.51□□□□□ -0.25
CASC3-203ENST00000418132 CNBPP62633 177 aaKnown RBP13.51□□□□□ -0.25
CASC3-203ENST00000418132 KMT2AQ03164 3969 aa13.5□□□□□ -0.25
CASC3-203ENST00000418132 J3QR89 54 aa13.5□□□□□ -0.25
CASC3-203ENST00000418132 TEN1Q86WV5 123 aa13.5□□□□□ -0.25
CASC3-203ENST00000418132 TRAV13-2A0A0B4J235 113 aa13.49□□□□□ -0.25
CASC3-203ENST00000418132 NDUFC2O95298 119 aa13.49□□□□□ -0.25
CASC3-203ENST00000418132 Q6ZRP5 223 aa13.49□□□□□ -0.25
CASC3-203ENST00000418132 LINC00337Q8N6G1 96 aa13.49□□□□□ -0.25
CASC3-203ENST00000418132 LST1O00453 97 aa13.49□□□□□ -0.25
CASC3-203ENST00000418132 M0QXV9 152 aa13.48□□□□□ -0.25
CASC3-203ENST00000418132 C1orf134Q5TEV5 83 aa13.48□□□□□ -0.25
CASC3-203ENST00000418132 ANKRD29Q8N6D5 301 aa13.47□□□□□ -0.25
CASC3-203ENST00000418132 XAGE1AQ9HD64 81 aa13.47□□□□□ -0.25
CASC3-203ENST00000418132 DNAH6Q9C0G6 4158 aa13.47□□□□□ -0.25
CASC3-203ENST00000418132 TRBV10-2A0A0K0K1G8 114 aa13.47□□□□□ -0.25
CASC3-203ENST00000418132 Q8NDZ9 215 aa13.46□□□□□ -0.25
CASC3-203ENST00000418132 GAGE2EQ4V326 116 aa13.45□□□□□ -0.26
CASC3-203ENST00000418132 PPDPFLQ8WWR9 84 aa13.45□□□□□ -0.26
CASC3-203ENST00000418132 GAGE2DQ9UEU5 116 aa13.45□□□□□ -0.26
CASC3-203ENST00000418132 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.44□□□□□ -0.26
CASC3-203ENST00000418132 A0A087WTM6 91 aa13.43□□□□□ -0.26
CASC3-203ENST00000418132 LINC01600Q96MT4 127 aa13.43□□□□□ -0.26
CASC3-203ENST00000418132 RPL18AQ02543 176 aaKnown RBP13.43□□□□□ -0.26
CASC3-203ENST00000418132 Q8N814 137 aa13.43□□□□□ -0.26
CASC3-203ENST00000418132 RPL28P46779 137 aaKnown RBP13.42□□□□□ -0.26
CASC3-203ENST00000418132 PRR3P79522 188 aaKnown RBP13.42□□□□□ -0.26
CASC3-203ENST00000418132 DNAH2Q9P225 4427 aa13.42□□□□□ -0.26
CASC3-203ENST00000418132 LOC107984640A0A0U1RRK4 108 aa13.41□□□□□ -0.26
CASC3-203ENST00000418132 C9orf129Q5T035 196 aaKnown RBP13.41□□□□□ -0.26
CASC3-203ENST00000418132 SMIM11BQ8TCY0 68 aa13.39□□□□□ -0.27
CASC3-203ENST00000418132 VPREB1P12018 145 aa13.38□□□□□ -0.27
CASC3-203ENST00000418132 H3BT86 120 aa13.38□□□□□ -0.27
CASC3-203ENST00000418132 C9orf163Q8N9P6 203 aa13.38□□□□□ -0.27
CASC3-203ENST00000418132 NCR3O14931 201 aa13.37□□□□□ -0.27
CASC3-203ENST00000418132 OR13C6PQ8NH95 151 aa13.37□□□□□ -0.27
CASC3-203ENST00000418132 GAGE2BQ13066 116 aa13.36□□□□□ -0.27
CASC3-203ENST00000418132 FAM218AQ96MZ4 157 aa13.36□□□□□ -0.27
CASC3-203ENST00000418132 TEX49A0A1B0GTD5 131 aa13.34□□□□□ -0.27
CASC3-203ENST00000418132 TMEM126AQ9H061 195 aa13.34□□□□□ -0.27
CASC3-203ENST00000418132 PLA2G2DQ9UNK4 145 aa13.34□□□□□ -0.27
CASC3-203ENST00000418132 C16orf90A8MZG2 172 aa13.33□□□□□ -0.28
CASC3-203ENST00000418132 TRACP01848 142 aa13.33□□□□□ -0.28
CASC3-203ENST00000418132 LCE6AA0A183 80 aa13.32□□□□□ -0.28
CASC3-203ENST00000418132 RTL8CO15255 209 aa13.32□□□□□ -0.28
CASC3-203ENST00000418132 A0A096LNI7 61 aa13.32□□□□□ -0.28
CASC3-203ENST00000418132 TNP2Q05952 138 aa13.31□□□□□ -0.28
CASC3-203ENST00000418132 PKIGQ9Y2B9 76 aa13.31□□□□□ -0.28
CASC3-203ENST00000418132 IGLV6-57P01721 117 aa13.31□□□□□ -0.28
CASC3-203ENST00000418132 PCP4P48539 62 aa13.31□□□□□ -0.28
CASC3-203ENST00000418132 S100A7L2Q5SY68 101 aa13.31□□□□□ -0.28
CASC3-203ENST00000418132 SERTAD4-AS1Q5TG53 156 aa13.31□□□□□ -0.28
CASC3-203ENST00000418132 DNAH17Q9UFH2 4485 aa13.3□□□□□ -0.28
CASC3-203ENST00000418132 M0R378 163 aa13.3□□□□□ -0.28
CASC3-203ENST00000418132 HYDINQ4G0P3 5121 aa13.29□□□□□ -0.28
CASC3-203ENST00000418132 SDIM1Q6ZPB5 146 aa13.29□□□□□ -0.28
CASC3-203ENST00000418132 IGLV5-37A0A075B6J1 123 aa13.29□□□□□ -0.28
CASC3-203ENST00000418132 H0YGX0 51 aa13.29□□□□□ -0.28
CASC3-203ENST00000418132 CDIP1Q9H305 208 aa13.28□□□□□ -0.28
CASC3-203ENST00000418132 FAM168BA1KXE4 195 aa13.27□□□□□ -0.28
CASC3-203ENST00000418132 KRTAP7-1Q8IUC3 87 aa13.27□□□□□ -0.28
CASC3-203ENST00000418132 SIGMAR1Q99720 223 aa13.27□□□□□ -0.28
CASC3-203ENST00000418132 A0A087WYN8 130 aa13.27□□□□□ -0.29
CASC3-203ENST00000418132 IGKV2-24A0A0C4DH68 120 aa13.26□□□□□ -0.29
CASC3-203ENST00000418132 TRBV10-3A0A0K0K1G6 114 aa13.26□□□□□ -0.29
CASC3-203ENST00000418132 NKAPP1Q8N9T2 125 aa13.26□□□□□ -0.29
CASC3-203ENST00000418132 BAALC-AS2P0C853 105 aa13.25□□□□□ -0.29
CASC3-203ENST00000418132 SACSQ9NZJ4 4579 aa13.25□□□□□ -0.29
CASC3-203ENST00000418132 CHTF8P0CG12 524 aa13.22□□□□□ -0.29
CASC3-203ENST00000418132 FAM19A5Q7Z5A7 132 aaPredicted RBP13.22□□□□□ -0.29
CASC3-203ENST00000418132 C7orf33Q8WU49 177 aa13.22□□□□□ -0.29
CASC3-203ENST00000418132 FRAS1Q86XX4 4008 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms