RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 TRBV7-6A0A0J9YX20 115 aa10.22□□□□□ -0.77
NCKIPSD-204ENST00000416649 STHQ8IWL8 128 aa10.22□□□□□ -0.77
NCKIPSD-204ENST00000416649 C1orf158Q8N1D5 194 aa10.22□□□□□ -0.77
NCKIPSD-204ENST00000416649 C16orf95Q9H693 158 aa10.22□□□□□ -0.77
NCKIPSD-204ENST00000416649 LY6G6DO95868 133 aa10.21□□□□□ -0.77
NCKIPSD-204ENST00000416649 NANOS2P60321 138 aaKnown RBP10.21□□□□□ -0.78
NCKIPSD-204ENST00000416649 KLKP1Q107X0 134 aa10.21□□□□□ -0.78
NCKIPSD-204ENST00000416649 EPM2AB3EWF7 344 aa10.2□□□□□ -0.78
NCKIPSD-204ENST00000416649 KRTAP1-1Q07627 177 aa10.2□□□□□ -0.78
NCKIPSD-204ENST00000416649 A0A087WZ39 114 aa10.2□□□□□ -0.78
NCKIPSD-204ENST00000416649 Q6ZVQ6 151 aa10.2□□□□□ -0.78
NCKIPSD-204ENST00000416649 TM2D3Q9BRN9 247 aa10.2□□□□□ -0.78
NCKIPSD-204ENST00000416649 TRGV4A0A0C4DH28 118 aa10.2□□□□□ -0.78
NCKIPSD-204ENST00000416649 Q8N3U1 123 aa10.2□□□□□ -0.78
NCKIPSD-204ENST00000416649 Q6ZQT0 140 aa10.18□□□□□ -0.78
NCKIPSD-204ENST00000416649 LINC00167Q96N53 147 aa10.18□□□□□ -0.78
NCKIPSD-204ENST00000416649 LINC00482Q8N8I6 264 aa10.17□□□□□ -0.78
NCKIPSD-204ENST00000416649 A0A096LPF7 62 aa10.17□□□□□ -0.78
NCKIPSD-204ENST00000416649 C9orf116Q5BN46 136 aaPredicted RBP10.17□□□□□ -0.78
NCKIPSD-204ENST00000416649 LINC00959A0A1B0GUT2 108 aa10.16□□□□□ -0.78
NCKIPSD-204ENST00000416649 TRBV6-8A0A0A6YYG3 113 aa10.15□□□□□ -0.78
NCKIPSD-204ENST00000416649 C1orf195Q5TG92 126 aa10.15□□□□□ -0.78
NCKIPSD-204ENST00000416649 SPATA3Q8NHX4 192 aa10.14□□□□□ -0.79
NCKIPSD-204ENST00000416649 MIFP14174 115 aa10.14□□□□□ -0.79
NCKIPSD-204ENST00000416649 ODF3L2Q3SX64 289 aa10.14□□□□□ -0.79
NCKIPSD-204ENST00000416649 DEFB114Q30KQ6 69 aa10.13□□□□□ -0.79
NCKIPSD-204ENST00000416649 LINC01006Q8NI28 216 aa10.13□□□□□ -0.79
NCKIPSD-204ENST00000416649 ZNF561-AS1K7EIQ3 104 aa10.12□□□□□ -0.79
NCKIPSD-204ENST00000416649 FAM229BQ4G0N7 80 aa10.12□□□□□ -0.79
NCKIPSD-204ENST00000416649 Q6ZQY7 126 aa10.12□□□□□ -0.79
NCKIPSD-204ENST00000416649 V9GYY9 64 aa10.12□□□□□ -0.79
NCKIPSD-204ENST00000416649 F8WDY8 70 aa10.11□□□□□ -0.79
NCKIPSD-204ENST00000416649 LINC00575Q6W349 94 aa10.11□□□□□ -0.79
NCKIPSD-204ENST00000416649 IGLV10-54A0A075B6I4 117 aa10.11□□□□□ -0.79
NCKIPSD-204ENST00000416649 IL17DQ8TAD2 202 aa10.11□□□□□ -0.79
NCKIPSD-204ENST00000416649 TRRAPQ9Y4A5 3859 aa10.1□□□□□ -0.79
NCKIPSD-204ENST00000416649 INAFM1C9JVW0 142 aa10.1□□□□□ -0.79
NCKIPSD-204ENST00000416649 BCE1O60756 84 aa10.1□□□□□ -0.79
NCKIPSD-204ENST00000416649 NREPQ16612 68 aa10.1□□□□□ -0.79
NCKIPSD-204ENST00000416649 LINC00269Q8N2A0 174 aa10.1□□□□□ -0.79
NCKIPSD-204ENST00000416649 Q8N9L7 120 aa10.1□□□□□ -0.79
NCKIPSD-204ENST00000416649 C4orf3Q8WVX3 66 aa10.1□□□□□ -0.79
NCKIPSD-204ENST00000416649 Q8NDZ9 215 aa10.1□□□□□ -0.79
NCKIPSD-204ENST00000416649 CCL24O00175 119 aa10.09□□□□□ -0.79
NCKIPSD-204ENST00000416649 DAD1P61803 113 aa10.09□□□□□ -0.79
NCKIPSD-204ENST00000416649 TMEM254Q8TBM7 123 aa10.09□□□□□ -0.79
NCKIPSD-204ENST00000416649 SEC61GP60059 68 aa10.08□□□□□ -0.8
NCKIPSD-204ENST00000416649 Q8IZM0 81 aa10.08□□□□□ -0.8
NCKIPSD-204ENST00000416649 NDUFC1O43677 76 aa10.08□□□□□ -0.8
NCKIPSD-204ENST00000416649 LOC110117498A0A087WWA1 95 aa10.07□□□□□ -0.8
NCKIPSD-204ENST00000416649 TRBV7-4A0A0J9YYF1 115 aa10.07□□□□□ -0.8
NCKIPSD-204ENST00000416649 DEFB130BP0DP73 79 aa10.07□□□□□ -0.8
NCKIPSD-204ENST00000416649 DEFB130AP0DP74 79 aa10.07□□□□□ -0.8
NCKIPSD-204ENST00000416649 C6orf223Q8N319 242 aa10.06□□□□□ -0.8
NCKIPSD-204ENST00000416649 STAB1Q9NY15 2570 aa10.06□□□□□ -0.8
NCKIPSD-204ENST00000416649 BPY2O14599 106 aa10.06□□□□□ -0.8
NCKIPSD-204ENST00000416649 MAST4O15021 2626 aa10.06□□□□□ -0.8
NCKIPSD-204ENST00000416649 CXCL6P80162 114 aa10.06□□□□□ -0.8
NCKIPSD-204ENST00000416649 MUC7Q8TAX7 377 aa10.05□□□□□ -0.8
NCKIPSD-204ENST00000416649 LRCOL1A6NCL2 159 aa10.04□□□□□ -0.8
NCKIPSD-204ENST00000416649 DEFB4AO15263 64 aa10.03□□□□□ -0.8
NCKIPSD-204ENST00000416649 ATP5EP56381 51 aaPredicted RBP10.03□□□□□ -0.8
NCKIPSD-204ENST00000416649 C16orf74Q96GX8 76 aa10.02□□□□□ -0.81
NCKIPSD-204ENST00000416649 PLAC8L1A1L4L8 177 aa10.01□□□□□ -0.81
NCKIPSD-204ENST00000416649 GYPEP15421 78 aa10.01□□□□□ -0.81
NCKIPSD-204ENST00000416649 FUSP35637 526 aaKnown RBP eCLIP10.01□□□□□ -0.81
NCKIPSD-204ENST00000416649 BAHCC1Q9P281 2608 aa10.01□□□□□ -0.81
NCKIPSD-204ENST00000416649 PKD1L1Q8TDX9 2849 aa10.01□□□□□ -0.81
NCKIPSD-204ENST00000416649 PRYO14603 147 aa9.99□□□□□ -0.81
NCKIPSD-204ENST00000416649 PDE6GP18545 87 aa9.99□□□□□ -0.81
NCKIPSD-204ENST00000416649 KRTAP10-3P60369 221 aa9.99□□□□□ -0.81
NCKIPSD-204ENST00000416649 ESRGQ1W209 222 aa9.99□□□□□ -0.81
NCKIPSD-204ENST00000416649 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.99□□□□□ -0.81
NCKIPSD-204ENST00000416649 KIAA0087Q14695 138 aa9.99□□□□□ -0.81
NCKIPSD-204ENST00000416649 HIGD2AQ9BW72 106 aa9.99□□□□□ -0.81
NCKIPSD-204ENST00000416649 UNQ6190/PRO20217Q6UXQ8 127 aa9.98□□□□□ -0.81
NCKIPSD-204ENST00000416649 C10orf25Q5T742 122 aa9.98□□□□□ -0.81
NCKIPSD-204ENST00000416649 ANGP03950 147 aaKnown RBP9.97□□□□□ -0.81
NCKIPSD-204ENST00000416649 GIG44P09565 113 aaPredicted RBP9.97□□□□□ -0.81
NCKIPSD-204ENST00000416649 COX17Q14061 63 aa9.97□□□□□ -0.81
NCKIPSD-204ENST00000416649 CHCHD10Q8WYQ3 142 aaPredicted RBP9.97□□□□□ -0.81
NCKIPSD-204ENST00000416649 COL6A5A8TX70 2615 aa9.96□□□□□ -0.81
NCKIPSD-204ENST00000416649 C9orf66Q5T8R8 295 aa9.96□□□□□ -0.81
NCKIPSD-204ENST00000416649 XAGE1AQ9HD64 81 aa9.96□□□□□ -0.81
NCKIPSD-204ENST00000416649 NOTCH1P46531 2555 aa9.95□□□□□ -0.82
NCKIPSD-204ENST00000416649 CELA1Q9UNI1 258 aa9.94□□□□□ -0.82
NCKIPSD-204ENST00000416649 CD164L2Q6UWJ8 174 aa9.94□□□□□ -0.82
NCKIPSD-204ENST00000416649 C3orf84H3BNL1 204 aa9.93□□□□□ -0.82
NCKIPSD-204ENST00000416649 DIRC1Q969H9 104 aa9.93□□□□□ -0.82
NCKIPSD-204ENST00000416649 PRB2P02812 416 aaPredicted RBP9.93□□□□□ -0.82
NCKIPSD-204ENST00000416649 SPAG11BQ08648 103 aa9.92□□□□□ -0.82
NCKIPSD-204ENST00000416649 REG3AQ06141 175 aa9.91□□□□□ -0.82
NCKIPSD-204ENST00000416649 A0A1B0GUV1 79 aa9.91□□□□□ -0.82
NCKIPSD-204ENST00000416649 FAM30AQ9NZY2 134 aa9.91□□□□□ -0.82
NCKIPSD-204ENST00000416649 IGLV6-57P01721 117 aa9.9□□□□□ -0.82
NCKIPSD-204ENST00000416649 IGKV4-1P06312 121 aa9.9□□□□□ -0.82
NCKIPSD-204ENST00000416649 COX7BP24311 80 aa9.9□□□□□ -0.82
NCKIPSD-204ENST00000416649 Q6ZTC4 211 aa9.9□□□□□ -0.82
NCKIPSD-204ENST00000416649 FBN1P35555 2871 aaKnown RBP9.9□□□□□ -0.83
NCKIPSD-204ENST00000416649 CYSRT1A8MQ03 144 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms