RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 LINC00846Q9NV44 126 aa9.2□□□□□ -0.94
SCN1B-202ENST00000415950 EIF4EBP3O60516 100 aaPredicted RBP9.19□□□□□ -0.94
SCN1B-202ENST00000415950 KRTAP10-9P60411 292 aa9.19□□□□□ -0.94
SCN1B-202ENST00000415950 C14orf177Q52M58 125 aa9.19□□□□□ -0.94
SCN1B-202ENST00000415950 ZNF843Q8N446 348 aa9.19□□□□□ -0.94
SCN1B-202ENST00000415950 LINC00337Q8N6G1 96 aa9.19□□□□□ -0.94
SCN1B-202ENST00000415950 GCN1Q92616 2671 aaKnown RBP9.19□□□□□ -0.94
SCN1B-202ENST00000415950 DCHS1Q96JQ0 3298 aa9.19□□□□□ -0.94
SCN1B-202ENST00000415950 COL12A1Q99715 3063 aa9.19□□□□□ -0.94
SCN1B-202ENST00000415950 IGLV9-49A0A0B4J1Y8 123 aa9.19□□□□□ -0.94
SCN1B-202ENST00000415950 OXLD1Q5BKU9 147 aa9.18□□□□□ -0.94
SCN1B-202ENST00000415950 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.18□□□□□ -0.94
SCN1B-202ENST00000415950 TRAV7A0A075B6U4 112 aa9.18□□□□□ -0.94
SCN1B-202ENST00000415950 LINC01546A6NGU7 62 aa9.17□□□□□ -0.94
SCN1B-202ENST00000415950 DHRS4-AS1Q9P1J3 65 aa9.17□□□□□ -0.94
SCN1B-202ENST00000415950 PSPHP1O15172 72 aa9.16□□□□□ -0.94
SCN1B-202ENST00000415950 C6orf223Q8N319 242 aa9.16□□□□□ -0.94
SCN1B-202ENST00000415950 ITPR1Q14643 2758 aa9.16□□□□□ -0.94
SCN1B-202ENST00000415950 ATP5EP56381 51 aaPredicted RBP9.15□□□□□ -0.94
SCN1B-202ENST00000415950 DEFB116Q30KQ4 102 aa9.15□□□□□ -0.94
SCN1B-202ENST00000415950 FAM218AQ96MZ4 157 aa9.15□□□□□ -0.94
SCN1B-202ENST00000415950 C1orf137Q5JT78 98 aa9.15□□□□□ -0.95
SCN1B-202ENST00000415950 PMAIP1Q13794 54 aa9.14□□□□□ -0.95
SCN1B-202ENST00000415950 COX17Q14061 63 aa9.14□□□□□ -0.95
SCN1B-202ENST00000415950 LINC01547P58512 204 aaPredicted RBP9.13□□□□□ -0.95
SCN1B-202ENST00000415950 SMR3AQ99954 134 aa9.13□□□□□ -0.95
SCN1B-202ENST00000415950 LINC00575Q6W349 94 aa9.13□□□□□ -0.95
SCN1B-202ENST00000415950 RETNQ9HD89 108 aa9.13□□□□□ -0.95
SCN1B-202ENST00000415950 NOTCH1P46531 2555 aa9.12□□□□□ -0.95
SCN1B-202ENST00000415950 SERP1Q9Y6X1 66 aa9.12□□□□□ -0.95
SCN1B-202ENST00000415950 LY6G6DO95868 133 aa9.12□□□□□ -0.95
SCN1B-202ENST00000415950 TRAV10A0A0B4J240 114 aa9.11□□□□□ -0.95
SCN1B-202ENST00000415950 PRR15LQ9BU68 103 aa9.11□□□□□ -0.95
SCN1B-202ENST00000415950 PCOTHQ58A44 107 aa9.1□□□□□ -0.95
SCN1B-202ENST00000415950 BRI3O95415 125 aa9.1□□□□□ -0.95
SCN1B-202ENST00000415950 UNC79Q9P2D8 2635 aa9.1□□□□□ -0.95
SCN1B-202ENST00000415950 FHL2Q14192 279 aa9.1□□□□□ -0.95
SCN1B-202ENST00000415950 DMXL1Q9Y485 3027 aa9.09□□□□□ -0.95
SCN1B-202ENST00000415950 PLAC8L1A1L4L8 177 aa9.09□□□□□ -0.95
SCN1B-202ENST00000415950 KIR2DL5BQ8NHK3 375 aa9.09□□□□□ -0.95
SCN1B-202ENST00000415950 TEP1Q99973 2627 aaKnown RBP9.09□□□□□ -0.95
SCN1B-202ENST00000415950 Q6ZVQ6 151 aa9.09□□□□□ -0.95
SCN1B-202ENST00000415950 K7ERS5 55 aa9.08□□□□□ -0.96
SCN1B-202ENST00000415950 EGFEM1PQ0D2K5 195 aa9.08□□□□□ -0.96
SCN1B-202ENST00000415950 BEAN1Q3B7T3 259 aa9.08□□□□□ -0.96
SCN1B-202ENST00000415950 PRYO14603 147 aa9.08□□□□□ -0.96
SCN1B-202ENST00000415950 FAM19A4Q96LR4 140 aa9.08□□□□□ -0.96
SCN1B-202ENST00000415950 COL27A1Q8IZC6 1860 aaPredicted RBP9.08□□□□□ -0.96
SCN1B-202ENST00000415950 A0A087WSZ3 146 aa9.08□□□□□ -0.96
SCN1B-202ENST00000415950 NBEAL1Q6ZS30 2694 aa9.07□□□□□ -0.96
SCN1B-202ENST00000415950 SBSPONQ8IVN8 264 aa9.07□□□□□ -0.96
SCN1B-202ENST00000415950 NHLRC4P0CG21 123 aaPredicted RBP9.07□□□□□ -0.96
SCN1B-202ENST00000415950 TMEM254Q8TBM7 123 aa9.07□□□□□ -0.96
SCN1B-202ENST00000415950 TEX15Q9BXT5 2789 aa9.07□□□□□ -0.96
SCN1B-202ENST00000415950 TRBV7-7A0A0K0K1E9 115 aa9.06□□□□□ -0.96
SCN1B-202ENST00000415950 C11orf72Q8NBR9 251 aa9.06□□□□□ -0.96
SCN1B-202ENST00000415950 ESRGQ1W209 222 aa9.06□□□□□ -0.96
SCN1B-202ENST00000415950 Q6ZTC4 211 aa9.05□□□□□ -0.96
SCN1B-202ENST00000415950 CSDC2Q9Y534 153 aaKnown RBP9.05□□□□□ -0.96
SCN1B-202ENST00000415950 ASPMQ8IZT6 3477 aa9.05□□□□□ -0.96
SCN1B-202ENST00000415950 UBR5O95071 2799 aaPredicted RBP9.05□□□□□ -0.96
SCN1B-202ENST00000415950 FLNCQ14315 2725 aa9.05□□□□□ -0.96
SCN1B-202ENST00000415950 IGLV1-51P01701 117 aa9.04□□□□□ -0.96
SCN1B-202ENST00000415950 RETNLBQ9BQ08 111 aa9.04□□□□□ -0.96
SCN1B-202ENST00000415950 IGLV5-39A0A0G2JS06 123 aa9.04□□□□□ -0.96
SCN1B-202ENST00000415950 LITAFQ99732 161 aa9.04□□□□□ -0.96
SCN1B-202ENST00000415950 ZNF575Q86XF7 245 aa9.04□□□□□ -0.96
SCN1B-202ENST00000415950 MUC7Q8TAX7 377 aa9.03□□□□□ -0.96
SCN1B-202ENST00000415950 TRBV7-6A0A0J9YX20 115 aa9.03□□□□□ -0.96
SCN1B-202ENST00000415950 IGHV6-1A0A0B4J1U7 121 aa9.03□□□□□ -0.96
SCN1B-202ENST00000415950 IGHV3OR16-9A0A0B4J2B5 98 aa9.02□□□□□ -0.97
SCN1B-202ENST00000415950 SMCR5Q8TEV8 140 aa9.02□□□□□ -0.97
SCN1B-202ENST00000415950 C7orf33Q8WU49 177 aa9.02□□□□□ -0.97
SCN1B-202ENST00000415950 C10orf25Q5T742 122 aa9.01□□□□□ -0.97
SCN1B-202ENST00000415950 COL6A5A8TX70 2615 aa9□□□□□ -0.97
SCN1B-202ENST00000415950 SPINK1P00995 79 aa9□□□□□ -0.97
SCN1B-202ENST00000415950 CIRBP-AS1Q8TBR5 109 aa9□□□□□ -0.97
SCN1B-202ENST00000415950 IL17DQ8TAD2 202 aa8.99□□□□□ -0.97
SCN1B-202ENST00000415950 Q6ZRU5 148 aa8.99□□□□□ -0.97
SCN1B-202ENST00000415950 PRLHP81277 87 aa8.98□□□□□ -0.97
SCN1B-202ENST00000415950 REG3GQ6UW15 175 aa8.98□□□□□ -0.97
SCN1B-202ENST00000415950 C4orf26Q17RF5 130 aa8.98□□□□□ -0.97
SCN1B-202ENST00000415950 LY6G6CO95867 125 aa8.97□□□□□ -0.97
SCN1B-202ENST00000415950 Q9BRP9 147 aa8.97□□□□□ -0.97
SCN1B-202ENST00000415950 H0Y9P7 68 aa8.96□□□□□ -0.97
SCN1B-202ENST00000415950 A0A1B0GUV1 79 aa8.96□□□□□ -0.98
SCN1B-202ENST00000415950 CRYGAP11844 174 aa8.96□□□□□ -0.98
SCN1B-202ENST00000415950 ZNF706Q9Y5V0 76 aaPredicted RBP8.96□□□□□ -0.98
SCN1B-202ENST00000415950 HELZ2Q9BYK8 2649 aaKnown RBP8.95□□□□□ -0.98
SCN1B-202ENST00000415950 X6R8D5 127 aa8.95□□□□□ -0.98
SCN1B-202ENST00000415950 SPATA3Q8NHX4 192 aa8.94□□□□□ -0.98
SCN1B-202ENST00000415950 LYPD5Q6UWN5 251 aa8.93□□□□□ -0.98
SCN1B-202ENST00000415950 IGLV5-45A0A087WSX0 123 aa8.93□□□□□ -0.98
SCN1B-202ENST00000415950 TNRC18O15417 2968 aaPredicted RBP8.93□□□□□ -0.98
SCN1B-202ENST00000415950 SMIM29Q86T20 159 aa8.92□□□□□ -0.98
SCN1B-202ENST00000415950 ZANQ9Y493 2812 aa8.92□□□□□ -0.98
SCN1B-202ENST00000415950 KIAA0087Q14695 138 aa8.92□□□□□ -0.98
SCN1B-202ENST00000415950 C9orf129Q5T035 196 aaKnown RBP8.92□□□□□ -0.98
SCN1B-202ENST00000415950 LINC01556Q5JQF7 62 aa8.91□□□□□ -0.98
SCN1B-202ENST00000415950 HCG22E2RYF7 251 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms