RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 KRTAP19-5Q3LI72 72 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 NMSQ5H8A3 153 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 TMEM170BQ5T4T1 132 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 C12orf73Q69YU5 71 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 Q6JHZ5 121 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 C5orf38Q86SI9 138 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 BAGE2Q86Y30 109 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 MT1MQ8N339 61 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 ARL11Q969Q4 196 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 FAM167A-AS1Q96KT0 104 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 SPRR4Q96PI1 79 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 PRO1933Q9H354 126 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 CDC42SE2Q9NRR3 84 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 VPS13DQ5THJ4 4388 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 CCDC88BA6NC98 1476 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 A2ML1A8K2U0 1454 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 CFTRP13569 1480 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 CUX1P39880 1505 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 EHBP1L1Q8N3D4 1523 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 DNHD1Q96M86 4753 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 TARBP1Q13395 1621 aaKnown RBP-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 WIZO95785 1651 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 PKD1L3Q7Z443 1732 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 CRYBG1Q9Y4K1 1723 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 KIF20BQ96Q89 1820 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 PDCD11Q14690 1871 aaKnown RBP-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 MYH6P13533 1939 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 SPEGQ15772 3267 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 DNAH2Q9P225 4427 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 FAT3Q8TDW7 4589 aa-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 PLECQ15149 4684 aaKnown RBP-0.25□□□□□ -2.45
TRAPPC13-203ENST00000415825 SMG1Q96Q15 3661 aaKnown RBP-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 ANKRD36A6QL64 1941 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 MYH7P12883 1935 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 C4AP0C0L4 1744 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 C4BP0C0L5 1744 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 ARAP2Q8WZ64 1704 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 TMEM131LA2VDJ0 1609 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 NESP48681 1621 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 LRRC9Q6ZRR7 1453 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 MLH3Q9UHC1 1453 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 CPSF1Q10570 1443 aaKnown RBP-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 A0A087WVE0 104 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 LINC00959A0A1B0GUT2 108 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 A0A1B0GV90 55 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 MIF4GDA9UHW6 222 aaKnown RBP-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 H3BNG1 76 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 I3L3M4 83 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 MT2AP02795 61 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 IGLC1P0CG04 106 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 H1FX-AS1Q4G0G2 97 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 CCDC58Q4VC31 144 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 Q56UQ5 140 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 SFTA2Q6UW10 78 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 CLPSL2Q6UWE3 100 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 TMEM263Q8WUH6 116 aaKnown RBP-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 C1orf54Q8WWF1 131 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 LCN9Q8WX39 176 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 COPS9Q8WXC6 57 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 PP6455Q8WZ26 134 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 MT1LQ93083 61 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 AQP10Q96PS8 301 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 MGST2Q99735 147 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 FAM107BQ9H098 131 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 DPH3P1Q9H4G8 78 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 DYNLRB1Q9NP97 96 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 FAIMQ9NVQ4 179 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 HIGD1BQ9P298 99 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 CDKN2A-AS1Q9UH64 79 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 CENPEQ02224 2701 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 CEP250Q9BV73 2442 aa-0.26□□□□□ -2.45
TRAPPC13-203ENST00000415825 SPEF2Q9C093 1822 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 C5P01031 1676 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 SCN7AQ01118 1682 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 ZNF831Q5JPB2 1677 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 TOPAZ1Q8N9V7 1692 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 HMGXB3Q12766 1538 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 ERVK-7P63135 1459 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 C1orf167Q5SNV9 1468 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 PLEKHH2Q8IVE3 1493 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 TEX14Q8IWB6 1497 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 ROCK2O75116 1388 aaKnown RBP-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 TRAV30A0A087WSZ9 112 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 FAM25AB3EWG3 89 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 FAM25CB3EWG5 89 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 FAM25GB3EWG6 89 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 CHKB-CPT1BH3BT56 60 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 SFT2D2O95562 160 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 HMGA1P17096 107 aaKnown RBP-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 ATP5EP56381 51 aaPredicted RBP-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 UBE2D3P61077 147 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 UBE2D2P62837 147 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 RPL38P63173 70 aaKnown RBP-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 PRLHP81277 87 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 C10orf113Q5VZT2 155 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 MRPL54Q6P161 138 aaKnown RBP-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 COMMD6Q7Z4G1 85 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 MYOZ3Q8TDC0 251 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms