RNA–Protein interactions for RNA: ENST00000415495.5

CEACAM3-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 1 (best)

Gene CEACAM3, Length 1,640 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-203ENST00000415495 XAGE1AQ9HD64 81 aa13.86□□□□□ -0.19
CEACAM3-203ENST00000415495 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.85□□□□□ -0.19
CEACAM3-203ENST00000415495 NDUFC2O95298 119 aa13.85□□□□□ -0.19
CEACAM3-203ENST00000415495 Q8N814 137 aa13.85□□□□□ -0.19
CEACAM3-203ENST00000415495 A0A1B0GV90 55 aa13.83□□□□□ -0.2
CEACAM3-203ENST00000415495 NAA38Q9BRA0 125 aaKnown RBP13.83□□□□□ -0.2
CEACAM3-203ENST00000415495 GAGE2EQ4V326 116 aa13.82□□□□□ -0.2
CEACAM3-203ENST00000415495 PGPEP1Q9NXJ5 209 aa13.82□□□□□ -0.2
CEACAM3-203ENST00000415495 GAGE2DQ9UEU5 116 aa13.82□□□□□ -0.2
CEACAM3-203ENST00000415495 TSPAN13O95857 204 aa13.82□□□□□ -0.2
CEACAM3-203ENST00000415495 PRR3P79522 188 aaKnown RBP13.82□□□□□ -0.2
CEACAM3-203ENST00000415495 LINC00337Q8N6G1 96 aa13.82□□□□□ -0.2
CEACAM3-203ENST00000415495 H3BUT2 72 aa13.81□□□□□ -0.2
CEACAM3-203ENST00000415495 C9orf129Q5T035 196 aaKnown RBP13.81□□□□□ -0.2
CEACAM3-203ENST00000415495 LOC107984640A0A0U1RRK4 108 aa13.8□□□□□ -0.2
CEACAM3-203ENST00000415495 LCE6AA0A183 80 aa13.8□□□□□ -0.2
CEACAM3-203ENST00000415495 DNAH17Q9UFH2 4485 aa13.8□□□□□ -0.2
CEACAM3-203ENST00000415495 RTL8CO15255 209 aa13.79□□□□□ -0.2
CEACAM3-203ENST00000415495 RPL18AQ02543 176 aaKnown RBP13.79□□□□□ -0.2
CEACAM3-203ENST00000415495 C9orf163Q8N9P6 203 aa13.79□□□□□ -0.2
CEACAM3-203ENST00000415495 TRAV13-2A0A0B4J235 113 aa13.78□□□□□ -0.2
CEACAM3-203ENST00000415495 RPL13AP40429 203 aaKnown RBP13.78□□□□□ -0.2
CEACAM3-203ENST00000415495 SACSQ9NZJ4 4579 aa13.77□□□□□ -0.2
CEACAM3-203ENST00000415495 H7C2G1 150 aa13.76□□□□□ -0.21
CEACAM3-203ENST00000415495 TNP2Q05952 138 aa13.76□□□□□ -0.21
CEACAM3-203ENST00000415495 VPREB1P12018 145 aa13.75□□□□□ -0.21
CEACAM3-203ENST00000415495 GAGE2BQ13066 116 aa13.75□□□□□ -0.21
CEACAM3-203ENST00000415495 A0A1W2PPM0 123 aa13.75□□□□□ -0.21
CEACAM3-203ENST00000415495 NCR3O14931 201 aa13.73□□□□□ -0.21
CEACAM3-203ENST00000415495 PLA2G2DQ9UNK4 145 aa13.73□□□□□ -0.21
CEACAM3-203ENST00000415495 TRBV10-2A0A0K0K1G8 114 aa13.72□□□□□ -0.21
CEACAM3-203ENST00000415495 SDIM1Q6ZPB5 146 aa13.72□□□□□ -0.21
CEACAM3-203ENST00000415495 FRAS1Q86XX4 4008 aa13.72□□□□□ -0.21
CEACAM3-203ENST00000415495 A0A096LNI7 61 aa13.72□□□□□ -0.21
CEACAM3-203ENST00000415495 C16orf90A8MZG2 172 aa13.72□□□□□ -0.21
CEACAM3-203ENST00000415495 SERTAD4-AS1Q5TG53 156 aa13.71□□□□□ -0.22
CEACAM3-203ENST00000415495 Q1RN00 199 aa13.7□□□□□ -0.22
CEACAM3-203ENST00000415495 LINC01620Q4KN68 170 aa13.7□□□□□ -0.22
CEACAM3-203ENST00000415495 KRTAP7-1Q8IUC3 87 aa13.7□□□□□ -0.22
CEACAM3-203ENST00000415495 OR13C6PQ8NH95 151 aa13.69□□□□□ -0.22
CEACAM3-203ENST00000415495 FAM168BA1KXE4 195 aa13.68□□□□□ -0.22
CEACAM3-203ENST00000415495 TRIAP1O43715 76 aa13.68□□□□□ -0.22
CEACAM3-203ENST00000415495 FABP2P12104 132 aa13.68□□□□□ -0.22
CEACAM3-203ENST00000415495 FUSP35637 526 aaKnown RBP eCLIP13.68□□□□□ -0.22
CEACAM3-203ENST00000415495 VAMP3Q15836 100 aa13.68□□□□□ -0.22
CEACAM3-203ENST00000415495 TMEM126AQ9H061 195 aa13.68□□□□□ -0.22
CEACAM3-203ENST00000415495 IGLV5-37A0A075B6J1 123 aa13.67□□□□□ -0.22
CEACAM3-203ENST00000415495 M0R378 163 aa13.67□□□□□ -0.22
CEACAM3-203ENST00000415495 IGLV6-57P01721 117 aa13.67□□□□□ -0.22
CEACAM3-203ENST00000415495 RPL28P46779 137 aaKnown RBP13.67□□□□□ -0.22
CEACAM3-203ENST00000415495 PSMB2P49721 201 aa13.67□□□□□ -0.22
CEACAM3-203ENST00000415495 SMIM11BQ8TCY0 68 aa13.67□□□□□ -0.22
CEACAM3-203ENST00000415495 PKIGQ9Y2B9 76 aa13.65□□□□□ -0.22
CEACAM3-203ENST00000415495 IGKV2-24A0A0C4DH68 120 aa13.64□□□□□ -0.23
CEACAM3-203ENST00000415495 CHTF8P0CG12 524 aa13.64□□□□□ -0.23
CEACAM3-203ENST00000415495 S100A7L2Q5SY68 101 aa13.64□□□□□ -0.23
CEACAM3-203ENST00000415495 HECTD4Q9Y4D8 3996 aa13.63□□□□□ -0.23
CEACAM3-203ENST00000415495 TRBV10-3A0A0K0K1G6 114 aa13.62□□□□□ -0.23
CEACAM3-203ENST00000415495 SPCS1Q9Y6A9 102 aa13.62□□□□□ -0.23
CEACAM3-203ENST00000415495 IGLV5-52A0A0A0MRZ9 124 aa13.61□□□□□ -0.23
CEACAM3-203ENST00000415495 A0A1W2PNN7 141 aa13.61□□□□□ -0.23
CEACAM3-203ENST00000415495 SCGB1C2P0DMR2 95 aa13.61□□□□□ -0.23
CEACAM3-203ENST00000415495 DNAH11Q96DT5 4516 aa13.61□□□□□ -0.23
CEACAM3-203ENST00000415495 K7EP34 96 aa13.61□□□□□ -0.23
CEACAM3-203ENST00000415495 C7orf33Q8WU49 177 aa13.61□□□□□ -0.23
CEACAM3-203ENST00000415495 C22orf24Q9Y442 160 aa13.61□□□□□ -0.23
CEACAM3-203ENST00000415495 FAT2Q9NYQ8 4349 aa13.6□□□□□ -0.23
CEACAM3-203ENST00000415495 PANO1I0J062 215 aa13.6□□□□□ -0.23
CEACAM3-203ENST00000415495 KRTAP10-2P60368 255 aa13.6□□□□□ -0.23
CEACAM3-203ENST00000415495 FAM19A5Q7Z5A7 132 aaPredicted RBP13.6□□□□□ -0.23
CEACAM3-203ENST00000415495 NKAPP1Q8N9T2 125 aa13.6□□□□□ -0.23
CEACAM3-203ENST00000415495 RYR2Q92736 4967 aa13.6□□□□□ -0.23
CEACAM3-203ENST00000415495 GAGE10A6NGK3 116 aa13.59□□□□□ -0.23
CEACAM3-203ENST00000415495 COX6CP09669 75 aa13.58□□□□□ -0.24
CEACAM3-203ENST00000415495 LYRM7Q5U5X0 104 aa13.58□□□□□ -0.24
CEACAM3-203ENST00000415495 TCL1BO95988 128 aa13.57□□□□□ -0.24
CEACAM3-203ENST00000415495 UBE2V1Q13404 147 aa13.57□□□□□ -0.24
CEACAM3-203ENST00000415495 LINC00474Q9P2X8 69 aa13.57□□□□□ -0.24
CEACAM3-203ENST00000415495 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.57□□□□□ -0.24
CEACAM3-203ENST00000415495 GTF2H5Q6ZYL4 71 aa13.56□□□□□ -0.24
CEACAM3-203ENST00000415495 TRBV20-1A0A075B6N2 111 aa13.55□□□□□ -0.24
CEACAM3-203ENST00000415495 SPACA4Q8TDM5 124 aa13.55□□□□□ -0.24
CEACAM3-203ENST00000415495 LINC00167Q96N53 147 aa13.55□□□□□ -0.24
CEACAM3-203ENST00000415495 MRPL55Q7Z7F7 128 aaKnown RBP13.54□□□□□ -0.24
CEACAM3-203ENST00000415495 CLEC2BQ92478 149 aa13.54□□□□□ -0.24
CEACAM3-203ENST00000415495 TRAV23DV6A0A075B6W5 121 aa13.53□□□□□ -0.24
CEACAM3-203ENST00000415495 EPM2AB3EWF7 344 aa13.53□□□□□ -0.24
CEACAM3-203ENST00000415495 KMT2CQ8NEZ4 4911 aaKnown RBP13.53□□□□□ -0.24
CEACAM3-203ENST00000415495 IGLV1-50A0A075B6I6 118 aa13.53□□□□□ -0.24
CEACAM3-203ENST00000415495 C6orf99Q4VX62 202 aa13.53□□□□□ -0.24
CEACAM3-203ENST00000415495 H3BMG7 143 aa13.52□□□□□ -0.25
CEACAM3-203ENST00000415495 M0QXV9 152 aa13.52□□□□□ -0.25
CEACAM3-203ENST00000415495 LINC00336Q6ZUF6 198 aa13.52□□□□□ -0.25
CEACAM3-203ENST00000415495 KCNQ1DNQ9H478 68 aa13.52□□□□□ -0.25
CEACAM3-203ENST00000415495 H0YGX0 51 aa13.5□□□□□ -0.25
CEACAM3-203ENST00000415495 FAM218AQ96MZ4 157 aa13.5□□□□□ -0.25
CEACAM3-203ENST00000415495 RPL37AP8A6NKH3 93 aa13.5□□□□□ -0.25
CEACAM3-203ENST00000415495 LST1O00453 97 aa13.5□□□□□ -0.25
CEACAM3-203ENST00000415495 ZNF73O43830 326 aaPredicted RBP13.5□□□□□ -0.25
CEACAM3-203ENST00000415495 PKD1P98161 4303 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms