RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 TNXBP22105 4242 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 ZNF73O43830 326 aaPredicted RBP1.51□□□□□ -2.17
MCF2-204ENST00000414978 IGHV3-53P01767 116 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 GPX1P07203 203 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 ARMS2P0C7Q2 107 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 SMIM6P0DI80 62 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 FOXA3P55318 350 aaPredicted RBP1.51□□□□□ -2.17
MCF2-204ENST00000414978 LYZL1Q6UWQ5 148 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 IGKV2-28A0A075B6P5 120 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 TRAV21A0A0B4J279 112 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 F2Z2F3 143 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 IGKV2D-28P01615 120 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 DEFB1P60022 68 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 Q0VG73 95 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 VPS25Q9BRG1 176 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 MUC21A0A0G2JKD1 596 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 MUC21A0A140T8X8 626 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 FXYD7P58549 80 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 TMEM258P61165 79 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 GDF5OSQ5U4N7 250 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 BRK1Q8WUW1 75 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 HIST1H2BLQ99880 126 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 TIMM8BQ9Y5J9 83 aaPredicted RBP1.5□□□□□ -2.17
MCF2-204ENST00000414978 HERC1Q15751 4861 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 TRAV2A0A0B4J234 112 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 IGLC6P0CF74 106 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 ASIPP42127 132 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 SPANXN1Q5VSR9 72 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 FOXI2Q6ZQN5 318 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 ODF3Q96PU9 254 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 NIT2Q9NQR4 276 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 APLNQ9ULZ1 77 aa1.5□□□□□ -2.17
MCF2-204ENST00000414978 TRBV7-6A0A0J9YX20 115 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 C7orf71A4D174 169 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 C9JAW5 83 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 H3BVH4 76 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 TMEM256-PLSCR3K7ERE1 68 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 IGLV1-51P01701 117 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 DEFB131AP59861 70 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 IQCJQ1A5X6 159 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 DEFB114Q30KQ6 69 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 PRR9Q5T870 116 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 ST20-AS1Q8NBB2 130 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 C18orf32Q8TCD1 76 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 TOMM6Q96B49 74 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 SCGB3A1Q96QR1 104 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 NAA38Q9BRA0 125 aaKnown RBP1.49□□□□□ -2.17
MCF2-204ENST00000414978 HSPB8Q9UJY1 196 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 TRAV12-3A0A0B4J271 114 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 M0R2Z0 102 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 NUPR1O60356 82 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 CKS2P33552 79 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 SPINK13Q1W4C9 94 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 OCIAD2Q56VL3 154 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 CNFNQ9BYD5 112 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 TMEM191AQ9H0A3 160 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 PRO0461Q9UI25 63 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 TRAV12-2A0A075B6T6 113 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 LRCOL1A6NCL2 159 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 D6R8Y8 96 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 HLA-DRB4P13762 266 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 KRTDAPP60985 99 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 PYY3Q5JQD4 70 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 Q6ZQT7 251 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 OR10AG1Q8NH19 301 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 CHCHD1Q96BP2 118 aaKnown RBP1.49□□□□□ -2.17
MCF2-204ENST00000414978 PRELID3AQ96N28 172 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 CRCT1Q9UGL9 99 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 HLA-DRB4X5D2U9 266 aa1.49□□□□□ -2.17
MCF2-204ENST00000414978 A6NN06 94 aa1.48□□□□□ -2.17
MCF2-204ENST00000414978 GNRH2O43555 120 aa1.48□□□□□ -2.17
MCF2-204ENST00000414978 FAM19A2Q8N3H0 131 aa1.48□□□□□ -2.17
MCF2-204ENST00000414978 TMEM126AQ9H061 195 aa1.48□□□□□ -2.17
MCF2-204ENST00000414978 NCR2O95944 276 aa1.48□□□□□ -2.17
MCF2-204ENST00000414978 MGPP08493 103 aa1.48□□□□□ -2.17
MCF2-204ENST00000414978 HTN1P15515 57 aa1.48□□□□□ -2.17
MCF2-204ENST00000414978 AZU1P20160 251 aa1.48□□□□□ -2.17
MCF2-204ENST00000414978 EVI2AP22794 236 aa1.48□□□□□ -2.17
MCF2-204ENST00000414978 FP248Q71RG6 208 aaPredicted RBP1.48□□□□□ -2.17
MCF2-204ENST00000414978 DPH3P1Q9H4G8 78 aa1.48□□□□□ -2.17
MCF2-204ENST00000414978 LAMTOR2Q9Y2Q5 125 aa1.48□□□□□ -2.17
MCF2-204ENST00000414978 NPYP01303 97 aa1.48□□□□□ -2.17
MCF2-204ENST00000414978 RNASE3P12724 160 aaKnown RBP1.48□□□□□ -2.17
MCF2-204ENST00000414978 IFI27P40305 119 aaPredicted RBP1.48□□□□□ -2.17
MCF2-204ENST00000414978 PMCHL1Q16048 86 aa1.48□□□□□ -2.17
MCF2-204ENST00000414978 TDRG1Q3Y452 100 aa1.48□□□□□ -2.17
MCF2-204ENST00000414978 LINC01554Q52M75 96 aa1.48□□□□□ -2.17
MCF2-204ENST00000414978 SPINT4Q6UDR6 99 aa1.48□□□□□ -2.17
MCF2-204ENST00000414978 STAB2Q8WWQ8 2551 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 IGLV2-18A0A075B6J9 118 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 IGHV1-24A0A0C4DH33 117 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 C20orf202A1L168 122 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 A8MTW9 85 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 LEPROTL1O95214 131 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 PPP1R17O96001 155 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 HRES1P13985 223 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 NXT2Q9NPJ8 142 aaKnown RBP1.47□□□□□ -2.17
MCF2-204ENST00000414978 SORL1Q92673 2214 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 LOC107984156A0A0G2JMH3 177 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 C3orf79P0CE67 100 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms