RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 NDUFS5O43920 106 aa7.85□□□□□ -1.15
PTPRF-204ENST00000412568 COX7BP24311 80 aa7.85□□□□□ -1.15
PTPRF-204ENST00000412568 FAM19A5Q7Z5A7 132 aaPredicted RBP7.85□□□□□ -1.15
PTPRF-204ENST00000412568 HIGD2AQ9BW72 106 aa7.85□□□□□ -1.15
PTPRF-204ENST00000412568 CSDC2Q9Y534 153 aaKnown RBP7.85□□□□□ -1.15
PTPRF-204ENST00000412568 PDE6GP18545 87 aa7.85□□□□□ -1.15
PTPRF-204ENST00000412568 Q6Q795 121 aa7.85□□□□□ -1.15
PTPRF-204ENST00000412568 CELSR2Q9HCU4 2923 aa7.84□□□□□ -1.15
PTPRF-204ENST00000412568 MP68P56378 58 aa7.84□□□□□ -1.15
PTPRF-204ENST00000412568 X6R8D5 127 aa7.84□□□□□ -1.15
PTPRF-204ENST00000412568 ZNF575Q86XF7 245 aa7.83□□□□□ -1.16
PTPRF-204ENST00000412568 A0A087WZ39 114 aa7.83□□□□□ -1.16
PTPRF-204ENST00000412568 KRTAP10-3P60369 221 aa7.83□□□□□ -1.16
PTPRF-204ENST00000412568 KRTAP1-1Q07627 177 aa7.82□□□□□ -1.16
PTPRF-204ENST00000412568 Q6ZQY7 126 aa7.82□□□□□ -1.16
PTPRF-204ENST00000412568 APCP25054 2843 aa7.82□□□□□ -1.16
PTPRF-204ENST00000412568 FAM240AA0A1B0GVK7 77 aa7.81□□□□□ -1.16
PTPRF-204ENST00000412568 RPL37AP8A6NKH3 93 aa7.81□□□□□ -1.16
PTPRF-204ENST00000412568 SMCPP49901 116 aaPredicted RBP7.81□□□□□ -1.16
PTPRF-204ENST00000412568 LYPD5Q6UWN5 251 aa7.81□□□□□ -1.16
PTPRF-204ENST00000412568 ATP5EP2Q5VTU8 51 aa7.81□□□□□ -1.16
PTPRF-204ENST00000412568 HRCT1Q6UXD1 115 aa7.81□□□□□ -1.16
PTPRF-204ENST00000412568 HRNRQ86YZ3 2850 aaPredicted RBP7.81□□□□□ -1.16
PTPRF-204ENST00000412568 Q8IZM0 81 aa7.8□□□□□ -1.16
PTPRF-204ENST00000412568 UBE2AP49459 152 aa7.8□□□□□ -1.16
PTPRF-204ENST00000412568 FBN2P35556 2912 aa7.79□□□□□ -1.16
PTPRF-204ENST00000412568 H3BQ85 93 aa7.79□□□□□ -1.16
PTPRF-204ENST00000412568 SPATA3Q8NHX4 192 aa7.79□□□□□ -1.16
PTPRF-204ENST00000412568 CCKP06307 115 aa7.78□□□□□ -1.16
PTPRF-204ENST00000412568 SBSPONQ8IVN8 264 aa7.78□□□□□ -1.16
PTPRF-204ENST00000412568 A8MTW9 85 aa7.78□□□□□ -1.16
PTPRF-204ENST00000412568 C3orf84H3BNL1 204 aa7.78□□□□□ -1.16
PTPRF-204ENST00000412568 LOC107984640A0A0U1RRK4 108 aa7.78□□□□□ -1.16
PTPRF-204ENST00000412568 PRR4Q16378 134 aa7.78□□□□□ -1.16
PTPRF-204ENST00000412568 PRO0461Q9UI25 63 aa7.78□□□□□ -1.16
PTPRF-204ENST00000412568 IGHV3OR16-9A0A0B4J2B5 98 aa7.77□□□□□ -1.17
PTPRF-204ENST00000412568 IGLV5-39A0A0G2JS06 123 aa7.77□□□□□ -1.17
PTPRF-204ENST00000412568 SPTSSBQ8NFR3 76 aa7.77□□□□□ -1.17
PTPRF-204ENST00000412568 GIG44P09565 113 aaPredicted RBP7.77□□□□□ -1.17
PTPRF-204ENST00000412568 CR1P17927 2039 aa7.76□□□□□ -1.17
PTPRF-204ENST00000412568 HIVEP1P15822 2718 aa7.76□□□□□ -1.17
PTPRF-204ENST00000412568 A0A1B0GUV1 79 aa7.76□□□□□ -1.17
PTPRF-204ENST00000412568 LY6G6CO95867 125 aa7.76□□□□□ -1.17
PTPRF-204ENST00000412568 Q6JHZ5 121 aa7.76□□□□□ -1.17
PTPRF-204ENST00000412568 NDUFC2-KCTD14E9PQ53 114 aa7.75□□□□□ -1.17
PTPRF-204ENST00000412568 FAM19A1Q7Z5A9 133 aa7.75□□□□□ -1.17
PTPRF-204ENST00000412568 ESRGQ1W209 222 aa7.75□□□□□ -1.17
PTPRF-204ENST00000412568 NDUFB1O75438 58 aa7.74□□□□□ -1.17
PTPRF-204ENST00000412568 LINC00337Q8N6G1 96 aa7.74□□□□□ -1.17
PTPRF-204ENST00000412568 PPDPFQ9H3Y8 114 aa7.74□□□□□ -1.17
PTPRF-204ENST00000412568 C19orf73Q9NVV2 129 aa7.74□□□□□ -1.17
PTPRF-204ENST00000412568 RPL28P46779 137 aaKnown RBP7.74□□□□□ -1.17
PTPRF-204ENST00000412568 NIPBLQ6KC79 2804 aaeCLIP7.74□□□□□ -1.17
PTPRF-204ENST00000412568 A0A087WYN8 130 aa7.74□□□□□ -1.17
PTPRF-204ENST00000412568 Q8NAQ8 132 aa7.74□□□□□ -1.17
PTPRF-204ENST00000412568 CSNK1G2-AS1Q8NCQ2 148 aa7.73□□□□□ -1.17
PTPRF-204ENST00000412568 SVIPQ8NHG7 77 aa7.73□□□□□ -1.17
PTPRF-204ENST00000412568 TRBV10-3A0A0K0K1G6 114 aa7.73□□□□□ -1.17
PTPRF-204ENST00000412568 SOSTDC1Q6X4U4 206 aa7.73□□□□□ -1.17
PTPRF-204ENST00000412568 LRCOL1A6NCL2 159 aa7.73□□□□□ -1.17
PTPRF-204ENST00000412568 H0Y9J4 135 aa7.73□□□□□ -1.17
PTPRF-204ENST00000412568 IGLV5-45A0A087WSX0 123 aa7.72□□□□□ -1.17
PTPRF-204ENST00000412568 FAM19A3Q7Z5A8 133 aa7.72□□□□□ -1.17
PTPRF-204ENST00000412568 COX17Q14061 63 aa7.71□□□□□ -1.18
PTPRF-204ENST00000412568 LINC00846Q9NV44 126 aa7.71□□□□□ -1.18
PTPRF-204ENST00000412568 Q6ZRU5 148 aa7.71□□□□□ -1.18
PTPRF-204ENST00000412568 ZNF73O43830 326 aaPredicted RBP7.7□□□□□ -1.18
PTPRF-204ENST00000412568 C10orf25Q5T742 122 aa7.7□□□□□ -1.18
PTPRF-204ENST00000412568 IL17DQ8TAD2 202 aa7.7□□□□□ -1.18
PTPRF-204ENST00000412568 EIF4EBP3O60516 100 aaPredicted RBP7.7□□□□□ -1.18
PTPRF-204ENST00000412568 M0R378 163 aa7.69□□□□□ -1.18
PTPRF-204ENST00000412568 KRTAP10-11P60412 298 aa7.69□□□□□ -1.18
PTPRF-204ENST00000412568 C14orf177Q52M58 125 aa7.69□□□□□ -1.18
PTPRF-204ENST00000412568 LITAFQ99732 161 aa7.69□□□□□ -1.18
PTPRF-204ENST00000412568 SMIM26A0A096LP01 95 aa7.68□□□□□ -1.18
PTPRF-204ENST00000412568 PLAC8L1A1L4L8 177 aa7.68□□□□□ -1.18
PTPRF-204ENST00000412568 NDUFC1O43677 76 aa7.68□□□□□ -1.18
PTPRF-204ENST00000412568 EGFEM1PQ0D2K5 195 aa7.68□□□□□ -1.18
PTPRF-204ENST00000412568 WFDC13Q8IUB5 93 aa7.67□□□□□ -1.18
PTPRF-204ENST00000412568 CHKB-CPT1BH3BT56 60 aa7.67□□□□□ -1.18
PTPRF-204ENST00000412568 Q8N814 137 aa7.67□□□□□ -1.18
PTPRF-204ENST00000412568 TRAV7A0A075B6U4 112 aa7.67□□□□□ -1.18
PTPRF-204ENST00000412568 V9GYY9 64 aa7.67□□□□□ -1.18
PTPRF-204ENST00000412568 SMG1Q96Q15 3661 aaKnown RBP7.66□□□□□ -1.18
PTPRF-204ENST00000412568 TRBV7-7A0A0K0K1E9 115 aa7.66□□□□□ -1.18
PTPRF-204ENST00000412568 IGKV4-1P06312 121 aa7.64□□□□□ -1.19
PTPRF-204ENST00000412568 FAM218AQ96MZ4 157 aa7.64□□□□□ -1.19
PTPRF-204ENST00000412568 FAM30AQ9NZY2 134 aa7.64□□□□□ -1.19
PTPRF-204ENST00000412568 C1orf195Q5TG92 126 aa7.63□□□□□ -1.19
PTPRF-204ENST00000412568 B9D2Q9BPU9 175 aa7.62□□□□□ -1.19
PTPRF-204ENST00000412568 SERP1Q9Y6X1 66 aa7.62□□□□□ -1.19
PTPRF-204ENST00000412568 MXRA5Q9NR99 2828 aa7.62□□□□□ -1.19
PTPRF-204ENST00000412568 ATP5EP56381 51 aaPredicted RBP7.62□□□□□ -1.19
PTPRF-204ENST00000412568 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.62□□□□□ -1.19
PTPRF-204ENST00000412568 MRPL55Q7Z7F7 128 aaKnown RBP7.62□□□□□ -1.19
PTPRF-204ENST00000412568 C6orf48Q9UBA6 75 aa7.62□□□□□ -1.19
PTPRF-204ENST00000412568 MUC7Q8TAX7 377 aa7.61□□□□□ -1.19
PTPRF-204ENST00000412568 NUPR2A6NF83 97 aa7.6□□□□□ -1.19
PTPRF-204ENST00000412568 KMT2BQ9UMN6 2715 aaPredicted RBP7.6□□□□□ -1.19
PTPRF-204ENST00000412568 LINC01556Q5JQF7 62 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms