RNA–Protein interactions for RNA: ENST00000410628.1

RNU4-43P-201, Transcript of RNA, U4 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU4-43P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-43P-201ENST00000410628 CKS1BP61024 79 aa-2.92□□□□□ -2.88
RNU4-43P-201ENST00000410628 COPZ1P61923 177 aa-2.92□□□□□ -2.88
RNU4-43P-201ENST00000410628 GSKIPQ9P0R6 139 aa-2.92□□□□□ -2.88
RNU4-43P-201ENST00000410628 BPTFQ12830 3046 aa-2.93□□□□□ -2.88
RNU4-43P-201ENST00000410628 LRRC37AA6NMS7 1700 aa-2.93□□□□□ -2.88
RNU4-43P-201ENST00000410628 KIAA1551Q9HCM1 1747 aa-2.93□□□□□ -2.88
RNU4-43P-201ENST00000410628 TCHHQ07283 1943 aa-2.93□□□□□ -2.88
RNU4-43P-201ENST00000410628 SMIM15Q7Z3B0 74 aa-2.93□□□□□ -2.88
RNU4-43P-201ENST00000410628 SERP1Q9Y6X1 66 aa-2.93□□□□□ -2.88
RNU4-43P-201ENST00000410628 TLN2Q9Y4G6 2542 aa-2.94□□□□□ -2.88
RNU4-43P-201ENST00000410628 CFTRP13569 1480 aa-2.94□□□□□ -2.88
RNU4-43P-201ENST00000410628 RPS25P62851 125 aaKnown RBP-2.94□□□□□ -2.88
RNU4-43P-201ENST00000410628 LINC00846Q9NV44 126 aa-2.94□□□□□ -2.88
RNU4-43P-201ENST00000410628 SHROOM2Q13796 1616 aa-2.94□□□□□ -2.88
RNU4-43P-201ENST00000410628 ALKQ9UM73 1620 aa-2.94□□□□□ -2.88
RNU4-43P-201ENST00000410628 TRRAPQ9Y4A5 3859 aa-2.94□□□□□ -2.88
RNU4-43P-201ENST00000410628 SAA2P0DJI9 122 aaPredicted RBP-2.95□□□□□ -2.88
RNU4-43P-201ENST00000410628 COMMD6Q7Z4G1 85 aa-2.95□□□□□ -2.88
RNU4-43P-201ENST00000410628 SNRNP25Q9BV90 132 aaKnown RBP-2.95□□□□□ -2.88
RNU4-43P-201ENST00000410628 LRBAP50851 2863 aa-2.96□□□□□ -2.88
RNU4-43P-201ENST00000410628 HSD52Q0P140 79 aa-2.96□□□□□ -2.88
RNU4-43P-201ENST00000410628 DEFB107AQ8IZN7 70 aa-2.96□□□□□ -2.88
RNU4-43P-201ENST00000410628 TCEAL4Q96EI5 215 aa-2.96□□□□□ -2.88
RNU4-43P-201ENST00000410628 PPP3R2Q96LZ3 170 aa-2.96□□□□□ -2.88
RNU4-43P-201ENST00000410628 MANBALQ9NQG1 85 aa-2.96□□□□□ -2.88
RNU4-43P-201ENST00000410628 RGPD2P0DJD1 1756 aa-2.97□□□□□ -2.88
RNU4-43P-201ENST00000410628 A0A0G2JND7 137 aa-2.97□□□□□ -2.88
RNU4-43P-201ENST00000410628 TRBV7-7A0A0K0K1E9 115 aa-2.97□□□□□ -2.88
RNU4-43P-201ENST00000410628 MIF4GDA9UHW6 222 aaKnown RBP-2.97□□□□□ -2.88
RNU4-43P-201ENST00000410628 H7BZZ5 65 aa-2.97□□□□□ -2.88
RNU4-43P-201ENST00000410628 NDUFA3O95167 84 aa-2.97□□□□□ -2.88
RNU4-43P-201ENST00000410628 TRAPPC2P0DI81 140 aa-2.97□□□□□ -2.88
RNU4-43P-201ENST00000410628 TRAPPC2BP0DI82 140 aa-2.97□□□□□ -2.88
RNU4-43P-201ENST00000410628 Q56UQ5 140 aa-2.97□□□□□ -2.88
RNU4-43P-201ENST00000410628 ARL11Q969Q4 196 aa-2.97□□□□□ -2.88
RNU4-43P-201ENST00000410628 RERGLQ9H628 205 aa-2.97□□□□□ -2.88
RNU4-43P-201ENST00000410628 SPANXA1Q9NS26 97 aa-2.97□□□□□ -2.88
RNU4-43P-201ENST00000410628 CCDC167Q9P0B6 97 aa-2.97□□□□□ -2.88
RNU4-43P-201ENST00000410628 MYO9AB2RTY4 2548 aa-2.97□□□□□ -2.89
RNU4-43P-201ENST00000410628 C4AP0C0L4 1744 aa-2.98□□□□□ -2.89
RNU4-43P-201ENST00000410628 C4BP0C0L5 1744 aa-2.98□□□□□ -2.89
RNU4-43P-201ENST00000410628 SMG1Q96Q15 3661 aaKnown RBP-2.98□□□□□ -2.89
RNU4-43P-201ENST00000410628 DNAH17Q9UFH2 4485 aa-2.98□□□□□ -2.89
RNU4-43P-201ENST00000410628 CFAP46Q8IYW2 2715 aa-2.99□□□□□ -2.89
RNU4-43P-201ENST00000410628 GNGT1P63211 74 aa-2.99□□□□□ -2.89
RNU4-43P-201ENST00000410628 Q0VG73 95 aa-2.99□□□□□ -2.89
RNU4-43P-201ENST00000410628 COPS9Q8WXC6 57 aa-2.99□□□□□ -2.89
RNU4-43P-201ENST00000410628 SPTBN5Q9NRC6 3674 aaKnown RBP-2.99□□□□□ -2.89
RNU4-43P-201ENST00000410628 ROBO1Q9Y6N7 1651 aa-2.99□□□□□ -2.89
RNU4-43P-201ENST00000410628 GNG14A0A1W2PPG7 69 aa-3□□□□□ -2.89
RNU4-43P-201ENST00000410628 ARMS2P0C7Q2 107 aa-3□□□□□ -2.89
RNU4-43P-201ENST00000410628 CUX1P39880 1505 aa-3□□□□□ -2.89
RNU4-43P-201ENST00000410628 DNAH5Q8TE73 4624 aa-3.01□□□□□ -2.89
RNU4-43P-201ENST00000410628 H0Y9P7 68 aa-3.01□□□□□ -2.89
RNU4-43P-201ENST00000410628 SMR3BP02814 79 aaPredicted RBP-3.01□□□□□ -2.89
RNU4-43P-201ENST00000410628 GNG11P61952 73 aa-3.01□□□□□ -2.89
RNU4-43P-201ENST00000410628 CATR1Q13166 79 aa-3.01□□□□□ -2.89
RNU4-43P-201ENST00000410628 SCN11AQ9UI33 1791 aa-3.02□□□□□ -2.89
RNU4-43P-201ENST00000410628 H3BQF6 201 aa-3.02□□□□□ -2.89
RNU4-43P-201ENST00000410628 PRLHP81277 87 aa-3.02□□□□□ -2.89
RNU4-43P-201ENST00000410628 NMSQ5H8A3 153 aa-3.02□□□□□ -2.89
RNU4-43P-201ENST00000410628 TOP2BQ02880 1626 aa-3.03□□□□□ -2.89
RNU4-43P-201ENST00000410628 TARBP1Q13395 1621 aaKnown RBP-3.03□□□□□ -2.89
RNU4-43P-201ENST00000410628 C7orf77A4D0Y5 90 aa-3.03□□□□□ -2.89
RNU4-43P-201ENST00000410628 C12orf57Q99622 126 aa-3.03□□□□□ -2.89
RNU4-43P-201ENST00000410628 PSENENQ9NZ42 101 aa-3.03□□□□□ -2.89
RNU4-43P-201ENST00000410628 PHLPP1O60346 1717 aa-3.03□□□□□ -2.89
RNU4-43P-201ENST00000410628 COX6CP09669 75 aa-3.04□□□□□ -2.9
RNU4-43P-201ENST00000410628 DR1Q01658 176 aa-3.04□□□□□ -2.9
RNU4-43P-201ENST00000410628 C8orf59Q8N0T1 100 aaPredicted RBP-3.04□□□□□ -2.9
RNU4-43P-201ENST00000410628 GRIN2AQ12879 1464 aa-3.04□□□□□ -2.9
RNU4-43P-201ENST00000410628 K7EP13 123 aa-3.05□□□□□ -2.9
RNU4-43P-201ENST00000410628 PP6455Q8WZ26 134 aa-3.05□□□□□ -2.9
RNU4-43P-201ENST00000410628 PRO1854Q9UHT4 67 aa-3.05□□□□□ -2.9
RNU4-43P-201ENST00000410628 A2ML1A8K2U0 1454 aa-3.05□□□□□ -2.9
RNU4-43P-201ENST00000410628 SPENQ96T58 3664 aaKnown RBP-3.05□□□□□ -2.9
RNU4-43P-201ENST00000410628 MT1EP04732 61 aa-3.06□□□□□ -2.9
RNU4-43P-201ENST00000410628 MEIG1Q5JSS6 88 aa-3.06□□□□□ -2.9
RNU4-43P-201ENST00000410628 DIP2CQ9Y2E4 1556 aa-3.06□□□□□ -2.9
RNU4-43P-201ENST00000410628 MAPKBP1O60336 1514 aa-3.07□□□□□ -2.9
RNU4-43P-201ENST00000410628 F6UZH7 168 aa-3.07□□□□□ -2.9
RNU4-43P-201ENST00000410628 UBE2D4Q9Y2X8 147 aa-3.07□□□□□ -2.9
RNU4-43P-201ENST00000410628 CEP152O94986 1710 aa-3.07□□□□□ -2.9
RNU4-43P-201ENST00000410628 MRC2Q9UBG0 1479 aa-3.08□□□□□ -2.9
RNU4-43P-201ENST00000410628 MT1GP13640 62 aa-3.08□□□□□ -2.9
RNU4-43P-201ENST00000410628 DNAH10Q8IVF4 4471 aa-3.09□□□□□ -2.9
RNU4-43P-201ENST00000410628 OOSP1A8MZH6 123 aa-3.09□□□□□ -2.9
RNU4-43P-201ENST00000410628 APOC2P02655 101 aa-3.09□□□□□ -2.9
RNU4-43P-201ENST00000410628 ASIPP42127 132 aa-3.09□□□□□ -2.9
RNU4-43P-201ENST00000410628 ARPC4P59998 168 aa-3.09□□□□□ -2.9
RNU4-43P-201ENST00000410628 PREX1Q8TCU6 1659 aa-3.1□□□□□ -2.91
RNU4-43P-201ENST00000410628 LZICQ8WZA0 190 aa-3.1□□□□□ -2.91
RNU4-43P-201ENST00000410628 PFDN5Q99471 154 aa-3.1□□□□□ -2.91
RNU4-43P-201ENST00000410628 UBE2L5PA0A1B0GUS4 154 aa-3.11□□□□□ -2.91
RNU4-43P-201ENST00000410628 UBE2L3P68036 154 aaKnown RBP-3.11□□□□□ -2.91
RNU4-43P-201ENST00000410628 SMIM21Q3B7S5 101 aa-3.11□□□□□ -2.91
RNU4-43P-201ENST00000410628 VAMP8Q9BV40 100 aa-3.11□□□□□ -2.91
RNU4-43P-201ENST00000410628 KIF20BQ96Q89 1820 aa-3.12□□□□□ -2.91
RNU4-43P-201ENST00000410628 MON2Q7Z3U7 1717 aa-3.12□□□□□ -2.91
RNU4-43P-201ENST00000410628 COX6B2Q6YFQ2 88 aa-3.12□□□□□ -2.91
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms