RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 IMUPQ9GZP8 106 aa11.52□□□□□ -0.57
GCFC2-202ENST00000409857 IGHV3OR16-9A0A0B4J2B5 98 aa11.51□□□□□ -0.57
GCFC2-202ENST00000409857 APLNQ9ULZ1 77 aa11.51□□□□□ -0.57
GCFC2-202ENST00000409857 TRBV6-8A0A0A6YYG3 113 aa11.5□□□□□ -0.57
GCFC2-202ENST00000409857 INAFM2P0DMQ5 153 aa11.49□□□□□ -0.57
GCFC2-202ENST00000409857 C14orf132Q9NPU4 83 aa11.49□□□□□ -0.57
GCFC2-202ENST00000409857 DNAL4O96015 105 aa11.48□□□□□ -0.57
GCFC2-202ENST00000409857 LOC107984640A0A0U1RRK4 108 aa11.47□□□□□ -0.57
GCFC2-202ENST00000409857 GYPEP15421 78 aa11.47□□□□□ -0.57
GCFC2-202ENST00000409857 SLPIP03973 132 aa11.47□□□□□ -0.57
GCFC2-202ENST00000409857 OR13C6PQ8NH95 151 aa11.47□□□□□ -0.57
GCFC2-202ENST00000409857 A0A087WZ39 114 aa11.46□□□□□ -0.57
GCFC2-202ENST00000409857 A0A096LPF7 62 aa11.46□□□□□ -0.57
GCFC2-202ENST00000409857 LECT2O14960 151 aa11.46□□□□□ -0.57
GCFC2-202ENST00000409857 IBA57-AS1B1ANH7 110 aa11.45□□□□□ -0.58
GCFC2-202ENST00000409857 C9orf153Q5TBE3 101 aa11.45□□□□□ -0.58
GCFC2-202ENST00000409857 TENM2Q9NT68 2774 aa11.44□□□□□ -0.58
GCFC2-202ENST00000409857 LINC00959A0A1B0GUT2 108 aa11.44□□□□□ -0.58
GCFC2-202ENST00000409857 C3orf22Q8N5N4 141 aa11.44□□□□□ -0.58
GCFC2-202ENST00000409857 XCL1P47992 114 aa11.44□□□□□ -0.58
GCFC2-202ENST00000409857 CLPSL2Q6UWE3 100 aa11.44□□□□□ -0.58
GCFC2-202ENST00000409857 NCR3O14931 201 aa11.43□□□□□ -0.58
GCFC2-202ENST00000409857 C6orf226Q5I0X4 101 aa11.43□□□□□ -0.58
GCFC2-202ENST00000409857 PLECQ15149 4684 aaKnown RBP11.42□□□□□ -0.58
GCFC2-202ENST00000409857 H0YGX0 51 aa11.42□□□□□ -0.58
GCFC2-202ENST00000409857 FAM19A5Q7Z5A7 132 aaPredicted RBP11.42□□□□□ -0.58
GCFC2-202ENST00000409857 J3KT08 172 aa11.41□□□□□ -0.58
GCFC2-202ENST00000409857 LINC00846Q9NV44 126 aa11.41□□□□□ -0.58
GCFC2-202ENST00000409857 IGKV3D-7A0A0C4DH55 119 aa11.41□□□□□ -0.58
GCFC2-202ENST00000409857 UQCRQO14949 82 aa11.41□□□□□ -0.58
GCFC2-202ENST00000409857 CXCL5P42830 114 aa11.41□□□□□ -0.58
GCFC2-202ENST00000409857 PRR3P79522 188 aaKnown RBP11.41□□□□□ -0.58
GCFC2-202ENST00000409857 A0A1B0GX51 115 aa11.4□□□□□ -0.58
GCFC2-202ENST00000409857 LINC00526Q96FQ7 95 aa11.4□□□□□ -0.59
GCFC2-202ENST00000409857 OBSCN-AS1Q96MR7 158 aa11.39□□□□□ -0.59
GCFC2-202ENST00000409857 LYPD5Q6UWN5 251 aa11.39□□□□□ -0.59
GCFC2-202ENST00000409857 ESRGQ1W209 222 aa11.38□□□□□ -0.59
GCFC2-202ENST00000409857 SS18Q15532 418 aa11.36□□□□□ -0.59
GCFC2-202ENST00000409857 LINC00476Q8WZB0 136 aa11.36□□□□□ -0.59
GCFC2-202ENST00000409857 UPK3BQ9BT76 320 aa11.36□□□□□ -0.59
GCFC2-202ENST00000409857 LINC00588Q9Y4M8 146 aa11.36□□□□□ -0.59
GCFC2-202ENST00000409857 A0A087WVE0 104 aa11.36□□□□□ -0.59
GCFC2-202ENST00000409857 C2orf48Q96LS8 159 aa11.36□□□□□ -0.59
GCFC2-202ENST00000409857 HIST1H4AP62805 103 aaKnown RBP11.35□□□□□ -0.59
GCFC2-202ENST00000409857 RPS28P62857 69 aaKnown RBP11.35□□□□□ -0.59
GCFC2-202ENST00000409857 ALMS1Q8TCU4 4167 aa11.35□□□□□ -0.59
GCFC2-202ENST00000409857 UBE2DNLQ8IWF7 75 aa11.34□□□□□ -0.59
GCFC2-202ENST00000409857 COX7CP15954 63 aa11.34□□□□□ -0.59
GCFC2-202ENST00000409857 LELP1Q5T871 98 aa11.33□□□□□ -0.6
GCFC2-202ENST00000409857 Q8N3U1 123 aa11.33□□□□□ -0.6
GCFC2-202ENST00000409857 LYSTQ99698 3801 aa11.33□□□□□ -0.6
GCFC2-202ENST00000409857 ORMDL1Q9P0S3 153 aa11.33□□□□□ -0.6
GCFC2-202ENST00000409857 Q8IZM0 81 aa11.32□□□□□ -0.6
GCFC2-202ENST00000409857 LCE6AA0A183 80 aa11.32□□□□□ -0.6
GCFC2-202ENST00000409857 C9orf116Q5BN46 136 aaPredicted RBP11.32□□□□□ -0.6
GCFC2-202ENST00000409857 IGLV10-54A0A075B6I4 117 aa11.31□□□□□ -0.6
GCFC2-202ENST00000409857 CYSTM1Q9H1C7 97 aa11.31□□□□□ -0.6
GCFC2-202ENST00000409857 Q6JHZ5 121 aa11.31□□□□□ -0.6
GCFC2-202ENST00000409857 LY6G6CO95867 125 aa11.3□□□□□ -0.6
GCFC2-202ENST00000409857 LINC00269Q8N2A0 174 aa11.3□□□□□ -0.6
GCFC2-202ENST00000409857 A0A1B0GUV1 79 aa11.3□□□□□ -0.6
GCFC2-202ENST00000409857 ATOX1O00244 68 aa11.3□□□□□ -0.6
GCFC2-202ENST00000409857 CRYGAP11844 174 aa11.3□□□□□ -0.6
GCFC2-202ENST00000409857 RPL18AQ02543 176 aaKnown RBP11.29□□□□□ -0.6
GCFC2-202ENST00000409857 LINC01561Q8N1V8 128 aa11.29□□□□□ -0.6
GCFC2-202ENST00000409857 DNAH1Q9P2D7 4330 aa11.29□□□□□ -0.6
GCFC2-202ENST00000409857 hADV29S1A0JD25 119 aa11.29□□□□□ -0.6
GCFC2-202ENST00000409857 Q8NDZ9 215 aa11.29□□□□□ -0.6
GCFC2-202ENST00000409857 VPS13DQ5THJ4 4388 aa11.29□□□□□ -0.6
GCFC2-202ENST00000409857 KIAA0087Q14695 138 aa11.28□□□□□ -0.6
GCFC2-202ENST00000409857 Q8N814 137 aa11.28□□□□□ -0.6
GCFC2-202ENST00000409857 CCKP06307 115 aa11.27□□□□□ -0.61
GCFC2-202ENST00000409857 LINC00167Q96N53 147 aa11.26□□□□□ -0.61
GCFC2-202ENST00000409857 DNAH10OSP0CZ25 163 aa11.25□□□□□ -0.61
GCFC2-202ENST00000409857 WFDC10BQ8IUB3 73 aa11.25□□□□□ -0.61
GCFC2-202ENST00000409857 CHCHD10Q8WYQ3 142 aaPredicted RBP11.25□□□□□ -0.61
GCFC2-202ENST00000409857 ANGP03950 147 aaKnown RBP11.24□□□□□ -0.61
GCFC2-202ENST00000409857 LINC01556Q5JQF7 62 aa11.24□□□□□ -0.61
GCFC2-202ENST00000409857 USP17L23D6RBM5 183 aa11.23□□□□□ -0.61
GCFC2-202ENST00000409857 C6orf99Q4VX62 202 aa11.23□□□□□ -0.61
GCFC2-202ENST00000409857 CD164L2Q6UWJ8 174 aa11.23□□□□□ -0.61
GCFC2-202ENST00000409857 DNAH6Q9C0G6 4158 aa11.23□□□□□ -0.61
GCFC2-202ENST00000409857 REG3AQ06141 175 aa11.22□□□□□ -0.61
GCFC2-202ENST00000409857 TMEM256-PLSCR3K7ERE1 68 aa11.21□□□□□ -0.61
GCFC2-202ENST00000409857 NDUFC2O95298 119 aa11.21□□□□□ -0.61
GCFC2-202ENST00000409857 C6orf223Q8N319 242 aa11.21□□□□□ -0.61
GCFC2-202ENST00000409857 DPH3Q96FX2 82 aa11.21□□□□□ -0.61
GCFC2-202ENST00000409857 C10orf25Q5T742 122 aa11.2□□□□□ -0.62
GCFC2-202ENST00000409857 NBDYA0A0U1RRE5 68 aa11.2□□□□□ -0.62
GCFC2-202ENST00000409857 JMJD7-PLA2G4BH0Y9G9 81 aa11.2□□□□□ -0.62
GCFC2-202ENST00000409857 SERP2Q8N6R1 65 aa11.2□□□□□ -0.62
GCFC2-202ENST00000409857 COX17Q14061 63 aa11.19□□□□□ -0.62
GCFC2-202ENST00000409857 SACSQ9NZJ4 4579 aa11.19□□□□□ -0.62
GCFC2-202ENST00000409857 Q6ZR54 194 aa11.18□□□□□ -0.62
GCFC2-202ENST00000409857 FAM19A1Q7Z5A9 133 aa11.18□□□□□ -0.62
GCFC2-202ENST00000409857 TMEM258P61165 79 aa11.18□□□□□ -0.62
GCFC2-202ENST00000409857 UNQ6190/PRO20217Q6UXQ8 127 aa11.18□□□□□ -0.62
GCFC2-202ENST00000409857 KMT2CQ8NEZ4 4911 aaKnown RBP11.18□□□□□ -0.62
GCFC2-202ENST00000409857 S100A7L2Q5SY68 101 aa11.17□□□□□ -0.62
GCFC2-202ENST00000409857 ENHOQ6UWT2 76 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms