RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 HILS1P60008 231 aa2.13□□□□□ -2.07
CUL3-204ENST00000409777 LCE4AQ5TA78 99 aa2.13□□□□□ -2.07
CUL3-204ENST00000409777 MYO9AB2RTY4 2548 aa2.12□□□□□ -2.07
CUL3-204ENST00000409777 C2CD3Q4AC94 2353 aa2.12□□□□□ -2.07
CUL3-204ENST00000409777 LCE6AA0A183 80 aa2.12□□□□□ -2.07
CUL3-204ENST00000409777 FAM19A1Q7Z5A9 133 aa2.12□□□□□ -2.07
CUL3-204ENST00000409777 MRAPQ8TCY5 172 aa2.12□□□□□ -2.07
CUL3-204ENST00000409777 DSCR8Q96T75 97 aa2.12□□□□□ -2.07
CUL3-204ENST00000409777 HIVEP3Q5T1R4 2406 aa2.12□□□□□ -2.07
CUL3-204ENST00000409777 LINC01547P58512 204 aaPredicted RBP2.12□□□□□ -2.07
CUL3-204ENST00000409777 FAM236DA0A1B0GTK5 79 aa2.11□□□□□ -2.07
CUL3-204ENST00000409777 FAM236CP0DP71 79 aa2.11□□□□□ -2.07
CUL3-204ENST00000409777 ATP5EP56381 51 aaPredicted RBP2.11□□□□□ -2.07
CUL3-204ENST00000409777 ENHOQ6UWT2 76 aa2.11□□□□□ -2.07
CUL3-204ENST00000409777 RP1L1Q8IWN7 2480 aaPredicted RBP2.11□□□□□ -2.07
CUL3-204ENST00000409777 M0R2N4 97 aa2.11□□□□□ -2.07
CUL3-204ENST00000409777 NDUFC1O43677 76 aa2.11□□□□□ -2.07
CUL3-204ENST00000409777 C4orf26Q17RF5 130 aa2.11□□□□□ -2.07
CUL3-204ENST00000409777 Q6ZVQ6 151 aa2.11□□□□□ -2.07
CUL3-204ENST00000409777 PRR34Q9NV39 138 aa2.11□□□□□ -2.07
CUL3-204ENST00000409777 CELSR2Q9HCU4 2923 aa2.11□□□□□ -2.07
CUL3-204ENST00000409777 PFN2P35080 140 aa2.11□□□□□ -2.07
CUL3-204ENST00000409777 CRYBG3Q68DQ2 2970 aa2.11□□□□□ -2.07
CUL3-204ENST00000409777 FP248Q71RG6 208 aaPredicted RBP2.11□□□□□ -2.07
CUL3-204ENST00000409777 UBL5Q9BZL1 73 aa2.11□□□□□ -2.07
CUL3-204ENST00000409777 NBPF19A0A087WUL8 3843 aa2.1□□□□□ -2.07
CUL3-204ENST00000409777 TRGV4A0A0C4DH28 118 aa2.1□□□□□ -2.07
CUL3-204ENST00000409777 RBM3P98179 157 aaKnown RBP2.1□□□□□ -2.07
CUL3-204ENST00000409777 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.1□□□□□ -2.07
CUL3-204ENST00000409777 TOMM7Q9P0U1 55 aa2.1□□□□□ -2.07
CUL3-204ENST00000409777 TRGV2A0A075B6R0 118 aa2.1□□□□□ -2.07
CUL3-204ENST00000409777 TRAV23DV6A0A075B6W5 121 aa2.1□□□□□ -2.07
CUL3-204ENST00000409777 TRAV10A0A0B4J240 114 aa2.1□□□□□ -2.07
CUL3-204ENST00000409777 DNAJC9-AS1A6NH13 148 aa2.1□□□□□ -2.07
CUL3-204ENST00000409777 ELOF1P60002 83 aaKnown RBP2.1□□□□□ -2.07
CUL3-204ENST00000409777 PRR3P79522 188 aaKnown RBP2.1□□□□□ -2.07
CUL3-204ENST00000409777 KRTAP1-1Q07627 177 aa2.1□□□□□ -2.07
CUL3-204ENST00000409777 C6orf99Q4VX62 202 aa2.1□□□□□ -2.07
CUL3-204ENST00000409777 LINC00476Q8WZB0 136 aa2.1□□□□□ -2.07
CUL3-204ENST00000409777 MXRA5Q9NR99 2828 aa2.09□□□□□ -2.07
CUL3-204ENST00000409777 A0A1B0GW54 56 aa2.09□□□□□ -2.07
CUL3-204ENST00000409777 LYRM9A8MSI8 78 aa2.09□□□□□ -2.07
CUL3-204ENST00000409777 PRB1P04280 392 aa2.09□□□□□ -2.07
CUL3-204ENST00000409777 KRTAP26-1Q6PEX3 210 aa2.09□□□□□ -2.07
CUL3-204ENST00000409777 WFDC9Q8NEX5 89 aa2.09□□□□□ -2.07
CUL3-204ENST00000409777 CHCHD10Q8WYQ3 142 aaPredicted RBP2.09□□□□□ -2.07
CUL3-204ENST00000409777 KRTAP3-1Q9BYR8 98 aa2.09□□□□□ -2.07
CUL3-204ENST00000409777 OCR1Q9BZK8 76 aa2.09□□□□□ -2.07
CUL3-204ENST00000409777 PRO0255Q9UI72 69 aa2.09□□□□□ -2.07
CUL3-204ENST00000409777 PTPRZ1P23471 2315 aaPredicted RBP2.09□□□□□ -2.07
CUL3-204ENST00000409777 SMIM26A0A096LP01 95 aa2.09□□□□□ -2.08
CUL3-204ENST00000409777 A0A0U1RQV1 116 aa2.09□□□□□ -2.08
CUL3-204ENST00000409777 DEFB113Q30KQ7 82 aa2.09□□□□□ -2.08
CUL3-204ENST00000409777 C20orf197Q8N268 126 aa2.09□□□□□ -2.08
CUL3-204ENST00000409777 RETNQ9HD89 108 aa2.09□□□□□ -2.08
CUL3-204ENST00000409777 PRO0628Q9UI54 55 aa2.09□□□□□ -2.08
CUL3-204ENST00000409777 TENM4Q6N022 2769 aa2.09□□□□□ -2.08
CUL3-204ENST00000409777 C10orf25Q5T742 122 aa2.08□□□□□ -2.08
CUL3-204ENST00000409777 WFDC10AQ9H1F0 79 aa2.08□□□□□ -2.08
CUL3-204ENST00000409777 COL6A6A6NMZ7 2263 aa2.08□□□□□ -2.08
CUL3-204ENST00000409777 IGKV4-1P06312 121 aa2.08□□□□□ -2.08
CUL3-204ENST00000409777 REG3AQ06141 175 aa2.08□□□□□ -2.08
CUL3-204ENST00000409777 HRCT1Q6UXD1 115 aa2.08□□□□□ -2.08
CUL3-204ENST00000409777 LINC01006Q8NI28 216 aa2.08□□□□□ -2.08
CUL3-204ENST00000409777 UBR5O95071 2799 aaPredicted RBP2.08□□□□□ -2.08
CUL3-204ENST00000409777 IGLV5-48A0A075B6I7 105 aa2.08□□□□□ -2.08
CUL3-204ENST00000409777 COX7BP24311 80 aa2.08□□□□□ -2.08
CUL3-204ENST00000409777 C9orf116Q5BN46 136 aaPredicted RBP2.08□□□□□ -2.08
CUL3-204ENST00000409777 Q6ZTC4 211 aa2.08□□□□□ -2.08
CUL3-204ENST00000409777 LINC00269Q8N2A0 174 aa2.08□□□□□ -2.08
CUL3-204ENST00000409777 DNAH1Q9P2D7 4330 aa2.08□□□□□ -2.08
CUL3-204ENST00000409777 CEP295Q9C0D2 2601 aa2.07□□□□□ -2.08
CUL3-204ENST00000409777 Q6ZQY7 126 aa2.07□□□□□ -2.08
CUL3-204ENST00000409777 ZCCHC13Q8WW36 166 aaKnown RBP2.07□□□□□ -2.08
CUL3-204ENST00000409777 C6orf48Q9UBA6 75 aa2.07□□□□□ -2.08
CUL3-204ENST00000409777 INAFM1C9JVW0 142 aa2.07□□□□□ -2.08
CUL3-204ENST00000409777 MIFP14174 115 aa2.07□□□□□ -2.08
CUL3-204ENST00000409777 KRTAP10-9P60411 292 aa2.07□□□□□ -2.08
CUL3-204ENST00000409777 LELP1Q5T871 98 aa2.07□□□□□ -2.08
CUL3-204ENST00000409777 UNQ6190/PRO20217Q6UXQ8 127 aa2.07□□□□□ -2.08
CUL3-204ENST00000409777 LINC00336Q6ZUF6 198 aa2.07□□□□□ -2.08
CUL3-204ENST00000409777 MAPK1IP1LQ8NDC0 245 aa2.07□□□□□ -2.08
CUL3-204ENST00000409777 DIRC1Q969H9 104 aa2.07□□□□□ -2.08
CUL3-204ENST00000409777 RMI2Q96E14 147 aa2.07□□□□□ -2.08
CUL3-204ENST00000409777 TM2D3Q9BRN9 247 aa2.07□□□□□ -2.08
CUL3-204ENST00000409777 SPTAN1Q13813 2472 aaKnown RBP2.07□□□□□ -2.08
CUL3-204ENST00000409777 F8WEM9 126 aa2.06□□□□□ -2.08
CUL3-204ENST00000409777 ZNF73O43830 326 aaPredicted RBP2.06□□□□□ -2.08
CUL3-204ENST00000409777 RPL35AP18077 110 aaKnown RBP2.06□□□□□ -2.08
CUL3-204ENST00000409777 NREPQ16612 68 aa2.06□□□□□ -2.08
CUL3-204ENST00000409777 Q8NAQ8 132 aa2.06□□□□□ -2.08
CUL3-204ENST00000409777 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
CUL3-204ENST00000409777 IGLV5-37A0A075B6J1 123 aa2.06□□□□□ -2.08
CUL3-204ENST00000409777 IGKV3OR2-268A0A0C4DH90 116 aa2.06□□□□□ -2.08
CUL3-204ENST00000409777 KRTAP4-16G5E9R7 235 aaPredicted RBP2.06□□□□□ -2.08
CUL3-204ENST00000409777 H3BNG1 76 aa2.06□□□□□ -2.08
CUL3-204ENST00000409777 KRTAP10-3P60369 221 aa2.06□□□□□ -2.08
CUL3-204ENST00000409777 SPAG11BQ08648 103 aa2.06□□□□□ -2.08
CUL3-204ENST00000409777 EGFEM1PQ0D2K5 195 aa2.06□□□□□ -2.08
CUL3-204ENST00000409777 TMEM254Q8TBM7 123 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms