RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 LINC00336Q6ZUF6 198 aa10.8□□□□□ -0.68
SSB-202ENST00000409333 A0A096LNI7 61 aa10.8□□□□□ -0.68
SSB-202ENST00000409333 LOC107984156A0A0G2JMH3 177 aa10.8□□□□□ -0.68
SSB-202ENST00000409333 A4D1N5 150 aa10.8□□□□□ -0.68
SSB-202ENST00000409333 M0R143 59 aa10.8□□□□□ -0.68
SSB-202ENST00000409333 RPL24P83731 157 aaKnown RBP10.8□□□□□ -0.68
SSB-202ENST00000409333 BATFQ16520 125 aa10.8□□□□□ -0.68
SSB-202ENST00000409333 ARL17AQ8IVW1 177 aa10.8□□□□□ -0.68
SSB-202ENST00000409333 Q8NDZ9 215 aa10.79□□□□□ -0.68
SSB-202ENST00000409333 PKHD1P08F94 4074 aa10.78□□□□□ -0.68
SSB-202ENST00000409333 IGKV2-24A0A0C4DH68 120 aa10.78□□□□□ -0.68
SSB-202ENST00000409333 SDIM1Q6ZPB5 146 aa10.78□□□□□ -0.68
SSB-202ENST00000409333 COPS9Q8WXC6 57 aa10.78□□□□□ -0.68
SSB-202ENST00000409333 DNAH8Q96JB1 4490 aa10.78□□□□□ -0.68
SSB-202ENST00000409333 C16orf90A8MZG2 172 aa10.77□□□□□ -0.68
SSB-202ENST00000409333 SNHG12Q9BXW3 62 aa10.77□□□□□ -0.68
SSB-202ENST00000409333 PPDPFQ9H3Y8 114 aa10.77□□□□□ -0.68
SSB-202ENST00000409333 CHTF8P0CG12 524 aa10.76□□□□□ -0.69
SSB-202ENST00000409333 NHP2Q9NX24 153 aaKnown RBP10.75□□□□□ -0.69
SSB-202ENST00000409333 TMEM238LA0A1B0GVL6 79 aa10.75□□□□□ -0.69
SSB-202ENST00000409333 FAM168BA1KXE4 195 aa10.75□□□□□ -0.69
SSB-202ENST00000409333 A6NJY4 79 aa10.75□□□□□ -0.69
SSB-202ENST00000409333 PRR3P79522 188 aaKnown RBP10.74□□□□□ -0.69
SSB-202ENST00000409333 PKIGQ9Y2B9 76 aa10.74□□□□□ -0.69
SSB-202ENST00000409333 IGKV2-28A0A075B6P5 120 aa10.73□□□□□ -0.69
SSB-202ENST00000409333 A0A1B0GVY2 172 aa10.73□□□□□ -0.69
SSB-202ENST00000409333 PANO1I0J062 215 aa10.73□□□□□ -0.69
SSB-202ENST00000409333 K7ERJ3 54 aa10.73□□□□□ -0.69
SSB-202ENST00000409333 IGKV2D-28P01615 120 aa10.73□□□□□ -0.69
SSB-202ENST00000409333 CFC1BP0CG36 223 aa10.73□□□□□ -0.69
SSB-202ENST00000409333 CFC1P0CG37 223 aa10.73□□□□□ -0.69
SSB-202ENST00000409333 PGPEP1Q9NXJ5 209 aa10.73□□□□□ -0.69
SSB-202ENST00000409333 SERTAD4-AS1Q5TG53 156 aa10.72□□□□□ -0.69
SSB-202ENST00000409333 NCR3O14931 201 aa10.72□□□□□ -0.69
SSB-202ENST00000409333 NDUFC2O95298 119 aa10.72□□□□□ -0.69
SSB-202ENST00000409333 VPREB1P12018 145 aa10.72□□□□□ -0.69
SSB-202ENST00000409333 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.72□□□□□ -0.69
SSB-202ENST00000409333 KRTAP7-1Q8IUC3 87 aa10.71□□□□□ -0.69
SSB-202ENST00000409333 A0A1B0GWB2 263 aa10.7□□□□□ -0.7
SSB-202ENST00000409333 A6NDN8 102 aa10.7□□□□□ -0.7
SSB-202ENST00000409333 FAM19A5Q7Z5A7 132 aaPredicted RBP10.7□□□□□ -0.7
SSB-202ENST00000409333 LINC00337Q8N6G1 96 aa10.7□□□□□ -0.7
SSB-202ENST00000409333 A0A0B4J2C4 111 aa10.69□□□□□ -0.7
SSB-202ENST00000409333 PLA2G2DQ9UNK4 145 aa10.69□□□□□ -0.7
SSB-202ENST00000409333 LRP1BQ9NZR2 4599 aa10.68□□□□□ -0.7
SSB-202ENST00000409333 A0A1W2PNN7 141 aa10.68□□□□□ -0.7
SSB-202ENST00000409333 SPACA4Q8TDM5 124 aa10.68□□□□□ -0.7
SSB-202ENST00000409333 RAB37Q96AX2 223 aa10.68□□□□□ -0.7
SSB-202ENST00000409333 LINC00474Q9P2X8 69 aa10.68□□□□□ -0.7
SSB-202ENST00000409333 KRTAP10-1P60331 282 aa10.67□□□□□ -0.7
SSB-202ENST00000409333 DYNC1H1Q14204 4646 aaKnown RBP10.66□□□□□ -0.7
SSB-202ENST00000409333 NKAPP1Q8N9T2 125 aa10.65□□□□□ -0.7
SSB-202ENST00000409333 PRO1854Q9UHT4 67 aa10.65□□□□□ -0.7
SSB-202ENST00000409333 IGLV5-37A0A075B6J1 123 aa10.65□□□□□ -0.71
SSB-202ENST00000409333 TRBV10-2A0A0K0K1G8 114 aa10.65□□□□□ -0.71
SSB-202ENST00000409333 RPL13AP40429 203 aaKnown RBP10.65□□□□□ -0.71
SSB-202ENST00000409333 DPH3Q96FX2 82 aa10.65□□□□□ -0.71
SSB-202ENST00000409333 OR13C6PQ8NH95 151 aa10.64□□□□□ -0.71
SSB-202ENST00000409333 FAM30AQ9NZY2 134 aa10.64□□□□□ -0.71
SSB-202ENST00000409333 C22orf24Q9Y442 160 aa10.64□□□□□ -0.71
SSB-202ENST00000409333 TRAV13-2A0A0B4J235 113 aa10.63□□□□□ -0.71
SSB-202ENST00000409333 A0A087WYN8 130 aa10.62□□□□□ -0.71
SSB-202ENST00000409333 GAGE10A6NGK3 116 aa10.62□□□□□ -0.71
SSB-202ENST00000409333 H7C2G1 150 aa10.62□□□□□ -0.71
SSB-202ENST00000409333 M0QXV9 152 aa10.62□□□□□ -0.71
SSB-202ENST00000409333 M0R378 163 aa10.62□□□□□ -0.71
SSB-202ENST00000409333 COL5A1-AS1Q5SY13 56 aa10.62□□□□□ -0.71
SSB-202ENST00000409333 C7orf33Q8WU49 177 aa10.62□□□□□ -0.71
SSB-202ENST00000409333 S100A7L2Q5SY68 101 aa10.62□□□□□ -0.71
SSB-202ENST00000409333 TRBV10-3A0A0K0K1G6 114 aa10.61□□□□□ -0.71
SSB-202ENST00000409333 TAX1BP3O14907 124 aa10.61□□□□□ -0.71
SSB-202ENST00000409333 MRPL55Q7Z7F7 128 aaKnown RBP10.61□□□□□ -0.71
SSB-202ENST00000409333 TSPAN13O95857 204 aa10.6□□□□□ -0.71
SSB-202ENST00000409333 IGLV6-57P01721 117 aa10.6□□□□□ -0.71
SSB-202ENST00000409333 Q6ZSA8 131 aa10.6□□□□□ -0.71
SSB-202ENST00000409333 LINC00167Q96N53 147 aa10.6□□□□□ -0.71
SSB-202ENST00000409333 TMEM126AQ9H061 195 aa10.6□□□□□ -0.71
SSB-202ENST00000409333 Q1RN00 199 aa10.59□□□□□ -0.71
SSB-202ENST00000409333 PHF5AQ7RTV0 110 aaKnown RBP10.59□□□□□ -0.71
SSB-202ENST00000409333 NAA38Q9BRA0 125 aaKnown RBP10.59□□□□□ -0.71
SSB-202ENST00000409333 RPL37AP8A6NKH3 93 aa10.58□□□□□ -0.72
SSB-202ENST00000409333 EPM2AB3EWF7 344 aa10.58□□□□□ -0.72
SSB-202ENST00000409333 PLAC8Q9NZF1 115 aa10.58□□□□□ -0.72
SSB-202ENST00000409333 HAMPP81172 84 aa10.57□□□□□ -0.72
SSB-202ENST00000409333 SMIM11BQ8TCY0 68 aa10.57□□□□□ -0.72
SSB-202ENST00000409333 APOBP04114 4563 aaKnown RBP10.56□□□□□ -0.72
SSB-202ENST00000409333 IGLV1-50A0A075B6I6 118 aa10.55□□□□□ -0.72
SSB-202ENST00000409333 SCXQ7RTU7 201 aa10.55□□□□□ -0.72
SSB-202ENST00000409333 CIRBP-AS1Q8TBR5 109 aa10.55□□□□□ -0.72
SSB-202ENST00000409333 LBHQ53QV2 105 aaPredicted RBP10.54□□□□□ -0.72
SSB-202ENST00000409333 TRAV23DV6A0A075B6W5 121 aa10.54□□□□□ -0.72
SSB-202ENST00000409333 C9orf118A6NHY6 69 aa10.54□□□□□ -0.72
SSB-202ENST00000409333 H3BUT2 72 aa10.54□□□□□ -0.72
SSB-202ENST00000409333 KRTAP11-1Q8IUC1 163 aa10.53□□□□□ -0.72
SSB-202ENST00000409333 RPL28P46779 137 aaKnown RBP10.52□□□□□ -0.72
SSB-202ENST00000409333 TRIAP1O43715 76 aa10.52□□□□□ -0.73
SSB-202ENST00000409333 UBE2BP63146 152 aa10.52□□□□□ -0.73
SSB-202ENST00000409333 KCNQ1DNQ9H478 68 aa10.52□□□□□ -0.73
SSB-202ENST00000409333 PSMB2P49721 201 aa10.51□□□□□ -0.73
SSB-202ENST00000409333 EPPK1P58107 5090 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms