RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 Q6ZTC4 211 aa9.35□□□□□ -0.91
SNED1-205ENST00000405547 AKAP13Q12802 2813 aa9.34□□□□□ -0.91
SNED1-205ENST00000405547 A0A1B0GW54 56 aa9.34□□□□□ -0.91
SNED1-205ENST00000405547 PSPHP1O15172 72 aa9.34□□□□□ -0.91
SNED1-205ENST00000405547 A0A087WSZ3 146 aa9.33□□□□□ -0.92
SNED1-205ENST00000405547 PRO0628Q9UI54 55 aa9.32□□□□□ -0.92
SNED1-205ENST00000405547 Q6ZRU5 148 aa9.31□□□□□ -0.92
SNED1-205ENST00000405547 SPATA3Q8NHX4 192 aa9.31□□□□□ -0.92
SNED1-205ENST00000405547 KRTAP10-9P60411 292 aa9.31□□□□□ -0.92
SNED1-205ENST00000405547 M0R2N4 97 aa9.3□□□□□ -0.92
SNED1-205ENST00000405547 FAM218AQ96MZ4 157 aa9.3□□□□□ -0.92
SNED1-205ENST00000405547 LIMD2Q9BT23 127 aa9.3□□□□□ -0.92
SNED1-205ENST00000405547 IGHV6-1A0A0B4J1U7 121 aa9.29□□□□□ -0.92
SNED1-205ENST00000405547 NUPR2A6NF83 97 aa9.29□□□□□ -0.92
SNED1-205ENST00000405547 RETNQ9HD89 108 aa9.28□□□□□ -0.92
SNED1-205ENST00000405547 CIRBP-AS1Q8TBR5 109 aa9.28□□□□□ -0.92
SNED1-205ENST00000405547 LOC110117498A0A087WWA1 95 aa9.27□□□□□ -0.92
SNED1-205ENST00000405547 PLA2G2AP14555 144 aa9.27□□□□□ -0.93
SNED1-205ENST00000405547 KIAA0087Q14695 138 aa9.26□□□□□ -0.93
SNED1-205ENST00000405547 SMR3AQ99954 134 aa9.26□□□□□ -0.93
SNED1-205ENST00000405547 KLK9Q2XQG4 91 aa9.26□□□□□ -0.93
SNED1-205ENST00000405547 Q6ZQT0 140 aa9.26□□□□□ -0.93
SNED1-205ENST00000405547 CHD7Q9P2D1 2997 aa9.25□□□□□ -0.93
SNED1-205ENST00000405547 EPG5Q9HCE0 2579 aa9.25□□□□□ -0.93
SNED1-205ENST00000405547 DEFB116Q30KQ4 102 aa9.25□□□□□ -0.93
SNED1-205ENST00000405547 CENPEQ02224 2701 aa9.24□□□□□ -0.93
SNED1-205ENST00000405547 PCOTHQ58A44 107 aa9.24□□□□□ -0.93
SNED1-205ENST00000405547 C1orf64Q8NEQ6 169 aa9.24□□□□□ -0.93
SNED1-205ENST00000405547 C22orf24Q9Y442 160 aa9.23□□□□□ -0.93
SNED1-205ENST00000405547 LINC01556Q5JQF7 62 aa9.23□□□□□ -0.93
SNED1-205ENST00000405547 SMIM29Q86T20 159 aa9.23□□□□□ -0.93
SNED1-205ENST00000405547 CR1P17927 2039 aa9.23□□□□□ -0.93
SNED1-205ENST00000405547 Q9UF83 564 aa9.23□□□□□ -0.93
SNED1-205ENST00000405547 TP53AIP1Q9HCN2 124 aa9.22□□□□□ -0.93
SNED1-205ENST00000405547 ELOF1P60002 83 aaKnown RBP9.22□□□□□ -0.93
SNED1-205ENST00000405547 PRLHP81277 87 aa9.22□□□□□ -0.93
SNED1-205ENST00000405547 C6orf48Q9UBA6 75 aa9.22□□□□□ -0.93
SNED1-205ENST00000405547 LITAFQ99732 161 aa9.21□□□□□ -0.94
SNED1-205ENST00000405547 FHL3Q13643 280 aa9.2□□□□□ -0.94
SNED1-205ENST00000405547 C4orf26Q17RF5 130 aa9.2□□□□□ -0.94
SNED1-205ENST00000405547 LY6G6CO95867 125 aa9.19□□□□□ -0.94
SNED1-205ENST00000405547 H3BNG1 76 aa9.19□□□□□ -0.94
SNED1-205ENST00000405547 SMCR5Q8TEV8 140 aa9.19□□□□□ -0.94
SNED1-205ENST00000405547 IGLV5-52A0A0A0MRZ9 124 aa9.18□□□□□ -0.94
SNED1-205ENST00000405547 H3BPC8 53 aa9.17□□□□□ -0.94
SNED1-205ENST00000405547 Q8NBF4 154 aa9.17□□□□□ -0.94
SNED1-205ENST00000405547 VPREB1P12018 145 aa9.16□□□□□ -0.94
SNED1-205ENST00000405547 LINC00167Q96N53 147 aa9.16□□□□□ -0.94
SNED1-205ENST00000405547 FLNAP21333 2647 aaKnown RBP9.15□□□□□ -0.94
SNED1-205ENST00000405547 Q6ZRX8 168 aa9.14□□□□□ -0.95
SNED1-205ENST00000405547 TM2D3Q9BRN9 247 aa9.14□□□□□ -0.95
SNED1-205ENST00000405547 GVQW2A0A096LPI5 108 aaPredicted RBP9.13□□□□□ -0.95
SNED1-205ENST00000405547 IGLV6-57P01721 117 aa9.13□□□□□ -0.95
SNED1-205ENST00000405547 ERC2-IT1O76042 136 aa9.12□□□□□ -0.95
SNED1-205ENST00000405547 ACYP2P14621 99 aa9.11□□□□□ -0.95
SNED1-205ENST00000405547 MGAM2Q2M2H8 2515 aa9.1□□□□□ -0.95
SNED1-205ENST00000405547 X6R8D5 127 aa9.1□□□□□ -0.95
SNED1-205ENST00000405547 MKI67P46013 3256 aaKnown RBP9.1□□□□□ -0.95
SNED1-205ENST00000405547 LINC00476Q8WZB0 136 aa9.1□□□□□ -0.95
SNED1-205ENST00000405547 ITPR3Q14573 2671 aa9.09□□□□□ -0.95
SNED1-205ENST00000405547 TRAV22A0A0B4J277 110 aa9.09□□□□□ -0.95
SNED1-205ENST00000405547 CFAP46Q8IYW2 2715 aa9.08□□□□□ -0.96
SNED1-205ENST00000405547 TRANK1O15050 2925 aa9.07□□□□□ -0.96
SNED1-205ENST00000405547 FLNBO75369 2602 aaKnown RBP9.07□□□□□ -0.96
SNED1-205ENST00000405547 TRBV7-4A0A0J9YYF1 115 aa9.07□□□□□ -0.96
SNED1-205ENST00000405547 CHD6Q8TD26 2715 aa9.07□□□□□ -0.96
SNED1-205ENST00000405547 A0A1B0GU69 56 aa9.06□□□□□ -0.96
SNED1-205ENST00000405547 RETNLBQ9BQ08 111 aa9.06□□□□□ -0.96
SNED1-205ENST00000405547 ATRQ13535 2644 aa9.06□□□□□ -0.96
SNED1-205ENST00000405547 MAST4O15021 2626 aa9.05□□□□□ -0.96
SNED1-205ENST00000405547 C1orf134Q5TEV5 83 aa9.05□□□□□ -0.96
SNED1-205ENST00000405547 SPINK1P00995 79 aa9.04□□□□□ -0.96
SNED1-205ENST00000405547 NHLRC4P0CG21 123 aaPredicted RBP9.04□□□□□ -0.96
SNED1-205ENST00000405547 Q8NAQ8 132 aa9.04□□□□□ -0.96
SNED1-205ENST00000405547 MOBPQ13875 183 aa9.04□□□□□ -0.96
SNED1-205ENST00000405547 SPAG11AQ6PDA7 123 aa9.04□□□□□ -0.96
SNED1-205ENST00000405547 KLKP1Q107X0 134 aa9.03□□□□□ -0.96
SNED1-205ENST00000405547 C16orf90A8MZG2 172 aa9.03□□□□□ -0.96
SNED1-205ENST00000405547 IGKV2D-30A0A075B6S6 120 aa9.02□□□□□ -0.96
SNED1-205ENST00000405547 IGKV2-30P06310 120 aa9.02□□□□□ -0.96
SNED1-205ENST00000405547 HECTD1Q9ULT8 2610 aa9.02□□□□□ -0.96
SNED1-205ENST00000405547 C7orf65Q6ZTY9 151 aa9.01□□□□□ -0.97
SNED1-205ENST00000405547 VPS13AQ96RL7 3174 aa9.01□□□□□ -0.97
SNED1-205ENST00000405547 Q6ZRP5 223 aa9.01□□□□□ -0.97
SNED1-205ENST00000405547 FLG2Q5D862 2391 aaPredicted RBP9.01□□□□□ -0.97
SNED1-205ENST00000405547 RANBP2P49792 3224 aaKnown RBP9□□□□□ -0.97
SNED1-205ENST00000405547 EIF4EBP3O60516 100 aaPredicted RBP9□□□□□ -0.97
SNED1-205ENST00000405547 FSHBP01225 129 aa8.99□□□□□ -0.97
SNED1-205ENST00000405547 CSNK1G2-AS1Q8NCQ2 148 aa8.98□□□□□ -0.97
SNED1-205ENST00000405547 DNAH10OSP0CZ25 163 aa8.98□□□□□ -0.97
SNED1-205ENST00000405547 EPM2AB3EWF7 344 aa8.98□□□□□ -0.97
SNED1-205ENST00000405547 MAP1AP78559 2803 aaPredicted RBP8.97□□□□□ -0.97
SNED1-205ENST00000405547 A8MWP4 228 aa8.97□□□□□ -0.97
SNED1-205ENST00000405547 ST20-AS1Q8NBB2 130 aa8.97□□□□□ -0.97
SNED1-205ENST00000405547 KCNQ1DNQ9H478 68 aa8.97□□□□□ -0.97
SNED1-205ENST00000405547 MGAQ8IWI9 3026 aa8.96□□□□□ -0.97
SNED1-205ENST00000405547 LINC00528Q8N1L1 170 aa8.95□□□□□ -0.98
SNED1-205ENST00000405547 CYP4F30PQ9H0H9 118 aa8.95□□□□□ -0.98
SNED1-205ENST00000405547 HTTP42858 3142 aa8.95□□□□□ -0.98
SNED1-205ENST00000405547 K7EQZ3 153 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms