RNA–Protein interactions for RNA: ENST00000404249.7

CDK11A-208, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK11A, Length 2,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-208ENST00000404249 ENHOQ6UWT2 76 aa12□□□□□ -0.49
CDK11A-208ENST00000404249 KMT2BQ9UMN6 2715 aaPredicted RBP12□□□□□ -0.49
CDK11A-208ENST00000404249 NOTCH2Q04721 2471 aa11.98□□□□□ -0.49
CDK11A-208ENST00000404249 RPL18AQ02543 176 aaKnown RBP11.98□□□□□ -0.49
CDK11A-208ENST00000404249 COX7CP15954 63 aa11.98□□□□□ -0.49
CDK11A-208ENST00000404249 IGLV6-57P01721 117 aa11.97□□□□□ -0.49
CDK11A-208ENST00000404249 TENM1Q9UKZ4 2725 aa11.97□□□□□ -0.49
CDK11A-208ENST00000404249 GVQW2A0A096LPI5 108 aaPredicted RBP11.97□□□□□ -0.49
CDK11A-208ENST00000404249 LYPD5Q6UWN5 251 aa11.97□□□□□ -0.49
CDK11A-208ENST00000404249 C2orf48Q96LS8 159 aa11.97□□□□□ -0.49
CDK11A-208ENST00000404249 A0A087WVE0 104 aa11.96□□□□□ -0.49
CDK11A-208ENST00000404249 hADV29S1A0JD25 119 aa11.96□□□□□ -0.49
CDK11A-208ENST00000404249 NSD1Q96L73 2696 aaPredicted RBP11.96□□□□□ -0.5
CDK11A-208ENST00000404249 WFDC9Q8NEX5 89 aa11.95□□□□□ -0.5
CDK11A-208ENST00000404249 C6orf48Q9UBA6 75 aa11.95□□□□□ -0.5
CDK11A-208ENST00000404249 WIPF1O43516 503 aa11.94□□□□□ -0.5
CDK11A-208ENST00000404249 SMIM20Q8N5G0 67 aa11.93□□□□□ -0.5
CDK11A-208ENST00000404249 OTOGQ6ZRI0 2925 aa11.93□□□□□ -0.5
CDK11A-208ENST00000404249 ZNF561-AS1K7EIQ3 104 aa11.92□□□□□ -0.5
CDK11A-208ENST00000404249 ATP5EP2Q5VTU8 51 aa11.92□□□□□ -0.5
CDK11A-208ENST00000404249 TRBV10-3A0A0K0K1G6 114 aa11.91□□□□□ -0.5
CDK11A-208ENST00000404249 XAGE1AQ9HD64 81 aa11.91□□□□□ -0.5
CDK11A-208ENST00000404249 HECTD1Q9ULT8 2610 aa11.91□□□□□ -0.5
CDK11A-208ENST00000404249 WFDC10BQ8IUB3 73 aa11.9□□□□□ -0.5
CDK11A-208ENST00000404249 TRAV23DV6A0A075B6W5 121 aa11.9□□□□□ -0.5
CDK11A-208ENST00000404249 RBM3P98179 157 aaKnown RBP11.9□□□□□ -0.5
CDK11A-208ENST00000404249 USP17L23D6RBM5 183 aa11.89□□□□□ -0.51
CDK11A-208ENST00000404249 Q6ZQT0 140 aa11.89□□□□□ -0.51
CDK11A-208ENST00000404249 LAMTOR3Q9UHA4 124 aa11.89□□□□□ -0.51
CDK11A-208ENST00000404249 CRYGAP11844 174 aa11.89□□□□□ -0.51
CDK11A-208ENST00000404249 HIVEP1P15822 2718 aa11.88□□□□□ -0.51
CDK11A-208ENST00000404249 Q6ZQY7 126 aa11.88□□□□□ -0.51
CDK11A-208ENST00000404249 DIRC1Q969H9 104 aa11.88□□□□□ -0.51
CDK11A-208ENST00000404249 UBL5Q9BZL1 73 aa11.88□□□□□ -0.51
CDK11A-208ENST00000404249 RETNQ9HD89 108 aa11.88□□□□□ -0.51
CDK11A-208ENST00000404249 LOC110117498A0A087WWA1 95 aa11.88□□□□□ -0.51
CDK11A-208ENST00000404249 HIGD2BQ4VC39 106 aa11.88□□□□□ -0.51
CDK11A-208ENST00000404249 KPRPQ5T749 579 aaPredicted RBP11.88□□□□□ -0.51
CDK11A-208ENST00000404249 ATRQ13535 2644 aa11.87□□□□□ -0.51
CDK11A-208ENST00000404249 TEP1Q99973 2627 aaKnown RBP11.86□□□□□ -0.51
CDK11A-208ENST00000404249 H3BNG1 76 aa11.86□□□□□ -0.51
CDK11A-208ENST00000404249 SERP2Q8N6R1 65 aa11.86□□□□□ -0.51
CDK11A-208ENST00000404249 CAMK2N2Q96S95 79 aa11.86□□□□□ -0.51
CDK11A-208ENST00000404249 KRTAP26-1Q6PEX3 210 aa11.85□□□□□ -0.51
CDK11A-208ENST00000404249 TRRAPQ9Y4A5 3859 aa11.84□□□□□ -0.51
CDK11A-208ENST00000404249 H3BQ85 93 aa11.84□□□□□ -0.51
CDK11A-208ENST00000404249 ZNF73O43830 326 aaPredicted RBP11.84□□□□□ -0.51
CDK11A-208ENST00000404249 Q6ZTC4 211 aa11.83□□□□□ -0.52
CDK11A-208ENST00000404249 VPREB1P12018 145 aa11.82□□□□□ -0.52
CDK11A-208ENST00000404249 COX7BP24311 80 aa11.82□□□□□ -0.52
CDK11A-208ENST00000404249 EGFEM1PQ0D2K5 195 aa11.82□□□□□ -0.52
CDK11A-208ENST00000404249 FAM19A1Q7Z5A9 133 aa11.82□□□□□ -0.52
CDK11A-208ENST00000404249 DSCR8Q96T75 97 aa11.82□□□□□ -0.52
CDK11A-208ENST00000404249 M0R2N4 97 aa11.81□□□□□ -0.52
CDK11A-208ENST00000404249 OXLD1Q5BKU9 147 aa11.81□□□□□ -0.52
CDK11A-208ENST00000404249 Q6ZRU5 148 aa11.81□□□□□ -0.52
CDK11A-208ENST00000404249 C15orf56Q8N910 161 aa11.81□□□□□ -0.52
CDK11A-208ENST00000404249 ELOF1P60002 83 aaKnown RBP11.81□□□□□ -0.52
CDK11A-208ENST00000404249 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.8□□□□□ -0.52
CDK11A-208ENST00000404249 KRTAP10-11P60412 298 aa11.8□□□□□ -0.52
CDK11A-208ENST00000404249 UPK3BQ9BT76 320 aa11.8□□□□□ -0.52
CDK11A-208ENST00000404249 CYSTM1Q9H1C7 97 aa11.8□□□□□ -0.52
CDK11A-208ENST00000404249 TRBV7-6A0A0J9YX20 115 aa11.79□□□□□ -0.52
CDK11A-208ENST00000404249 PDE6GP18545 87 aa11.78□□□□□ -0.52
CDK11A-208ENST00000404249 M0R378 163 aa11.78□□□□□ -0.52
CDK11A-208ENST00000404249 ESRGQ1W209 222 aa11.78□□□□□ -0.52
CDK11A-208ENST00000404249 NDUFC2-KCTD14E9PQ53 114 aa11.77□□□□□ -0.52
CDK11A-208ENST00000404249 GHRHP01286 108 aa11.77□□□□□ -0.52
CDK11A-208ENST00000404249 C1orf43Q9BWL3 253 aa11.76□□□□□ -0.53
CDK11A-208ENST00000404249 Q6ZVQ6 151 aa11.76□□□□□ -0.53
CDK11A-208ENST00000404249 LINC01547P58512 204 aaPredicted RBP11.75□□□□□ -0.53
CDK11A-208ENST00000404249 TRBV7-4A0A0J9YYF1 115 aa11.74□□□□□ -0.53
CDK11A-208ENST00000404249 LINC01556Q5JQF7 62 aa11.73□□□□□ -0.53
CDK11A-208ENST00000404249 IGKV2D-24A0A075B6R9 120 aa11.72□□□□□ -0.53
CDK11A-208ENST00000404249 HAMPP81172 84 aa11.72□□□□□ -0.53
CDK11A-208ENST00000404249 Q6ZRP5 223 aa11.72□□□□□ -0.53
CDK11A-208ENST00000404249 LINC00528Q8N1L1 170 aa11.72□□□□□ -0.53
CDK11A-208ENST00000404249 TMEM258P61165 79 aa11.7□□□□□ -0.54
CDK11A-208ENST00000404249 DEFB131BA0A096LNP1 70 aa11.7□□□□□ -0.54
CDK11A-208ENST00000404249 F8WDY8 70 aa11.69□□□□□ -0.54
CDK11A-208ENST00000404249 SYCNQ0VAF6 134 aa11.69□□□□□ -0.54
CDK11A-208ENST00000404249 J3KT08 172 aa11.68□□□□□ -0.54
CDK11A-208ENST00000404249 CXCL6P80162 114 aa11.68□□□□□ -0.54
CDK11A-208ENST00000404249 C11orf45Q8TAV5 145 aa11.67□□□□□ -0.54
CDK11A-208ENST00000404249 LOC107984640A0A0U1RRK4 108 aa11.66□□□□□ -0.54
CDK11A-208ENST00000404249 PKD1L1Q8TDX9 2849 aa11.64□□□□□ -0.55
CDK11A-208ENST00000404249 BCE1O60756 84 aa11.64□□□□□ -0.55
CDK11A-208ENST00000404249 NKAPP1Q8N9T2 125 aa11.64□□□□□ -0.55
CDK11A-208ENST00000404249 DNAH10OSP0CZ25 163 aa11.62□□□□□ -0.55
CDK11A-208ENST00000404249 TENM3Q9P273 2699 aa11.62□□□□□ -0.55
CDK11A-208ENST00000404249 SERTAD4-AS1Q5TG53 156 aa11.62□□□□□ -0.55
CDK11A-208ENST00000404249 RPS28P62857 69 aaKnown RBP11.61□□□□□ -0.55
CDK11A-208ENST00000404249 KCNQ1DNQ9H478 68 aa11.61□□□□□ -0.55
CDK11A-208ENST00000404249 TRAV7A0A075B6U4 112 aa11.61□□□□□ -0.55
CDK11A-208ENST00000404249 SCXQ7RTU7 201 aa11.61□□□□□ -0.55
CDK11A-208ENST00000404249 KRTAP24-1Q3LI83 254 aa11.6□□□□□ -0.55
CDK11A-208ENST00000404249 C20orf197Q8N268 126 aa11.6□□□□□ -0.55
CDK11A-208ENST00000404249 C7orf33Q8WU49 177 aa11.6□□□□□ -0.55
CDK11A-208ENST00000404249 TRAV10A0A0B4J240 114 aa11.6□□□□□ -0.55
CDK11A-208ENST00000404249 DPH3Q96FX2 82 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms