RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 C22orf24Q9Y442 160 aa3.5□□□□□ -1.85
HMGB1P20-201ENST00000402555 LRP2P98164 4655 aa3.5□□□□□ -1.85
HMGB1P20-201ENST00000402555 IGLV5-39A0A0G2JS06 123 aa3.49□□□□□ -1.85
HMGB1P20-201ENST00000402555 GAGE10A6NGK3 116 aa3.49□□□□□ -1.85
HMGB1P20-201ENST00000402555 ATP5LO75964 103 aa3.49□□□□□ -1.85
HMGB1P20-201ENST00000402555 PFN2P35080 140 aa3.49□□□□□ -1.85
HMGB1P20-201ENST00000402555 DIRC1Q969H9 104 aa3.49□□□□□ -1.85
HMGB1P20-201ENST00000402555 ZNF625Q96I27 306 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P20-201ENST00000402555 RPL37AP8A6NKH3 93 aa3.48□□□□□ -1.85
HMGB1P20-201ENST00000402555 H0Y9J4 135 aa3.48□□□□□ -1.85
HMGB1P20-201ENST00000402555 SCO1O75880 301 aa3.48□□□□□ -1.85
HMGB1P20-201ENST00000402555 TRGC2P03986 189 aa3.48□□□□□ -1.85
HMGB1P20-201ENST00000402555 TMEM170BQ5T4T1 132 aa3.48□□□□□ -1.85
HMGB1P20-201ENST00000402555 MRPL55Q7Z7F7 128 aaKnown RBP3.48□□□□□ -1.85
HMGB1P20-201ENST00000402555 FAM19A2Q8N3H0 131 aa3.48□□□□□ -1.85
HMGB1P20-201ENST00000402555 PRR26Q8N8Z3 221 aa3.48□□□□□ -1.85
HMGB1P20-201ENST00000402555 CHTOPQ9Y3Y2 248 aaKnown RBP3.48□□□□□ -1.85
HMGB1P20-201ENST00000402555 KRTAP1-4P0C5Y4 121 aa3.47□□□□□ -1.85
HMGB1P20-201ENST00000402555 LBHQ53QV2 105 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P20-201ENST00000402555 IFI27L1Q96BM0 104 aa3.47□□□□□ -1.85
HMGB1P20-201ENST00000402555 CHCHD1Q96BP2 118 aaKnown RBP3.47□□□□□ -1.85
HMGB1P20-201ENST00000402555 LINC00167Q96N53 147 aa3.47□□□□□ -1.85
HMGB1P20-201ENST00000402555 ERG28Q9UKR5 140 aa3.47□□□□□ -1.85
HMGB1P20-201ENST00000402555 A0A0U1RRA0 63 aa3.46□□□□□ -1.86
HMGB1P20-201ENST00000402555 H0Y8G0 127 aa3.46□□□□□ -1.86
HMGB1P20-201ENST00000402555 HSBP1O75506 76 aa3.46□□□□□ -1.86
HMGB1P20-201ENST00000402555 SERF1AO75920 110 aa3.46□□□□□ -1.86
HMGB1P20-201ENST00000402555 NKAPP1Q8N9T2 125 aa3.46□□□□□ -1.86
HMGB1P20-201ENST00000402555 Q8NDZ9 215 aa3.46□□□□□ -1.86
HMGB1P20-201ENST00000402555 SND1-IT1Q9HBX3 110 aa3.46□□□□□ -1.86
HMGB1P20-201ENST00000402555 TP73-AS1Q9UF72 201 aa3.46□□□□□ -1.86
HMGB1P20-201ENST00000402555 IGLV5-37A0A075B6J1 123 aa3.45□□□□□ -1.86
HMGB1P20-201ENST00000402555 IGKV2-28A0A075B6P5 120 aa3.45□□□□□ -1.86
HMGB1P20-201ENST00000402555 TRAV12-1A0A0B4J245 112 aa3.45□□□□□ -1.86
HMGB1P20-201ENST00000402555 TMEM223A0PJW6 202 aa3.45□□□□□ -1.86
HMGB1P20-201ENST00000402555 COLCA2A8K830 154 aa3.45□□□□□ -1.86
HMGB1P20-201ENST00000402555 NUPR1O60356 82 aa3.45□□□□□ -1.86
HMGB1P20-201ENST00000402555 ZNF861PO60384 105 aa3.45□□□□□ -1.86
HMGB1P20-201ENST00000402555 IGKV2D-28P01615 120 aa3.45□□□□□ -1.86
HMGB1P20-201ENST00000402555 VPREB1P12018 145 aa3.45□□□□□ -1.86
HMGB1P20-201ENST00000402555 BCE1O60756 84 aa3.44□□□□□ -1.86
HMGB1P20-201ENST00000402555 FABP4P15090 132 aa3.44□□□□□ -1.86
HMGB1P20-201ENST00000402555 LINC00158P58513 81 aa3.44□□□□□ -1.86
HMGB1P20-201ENST00000402555 IGLV1-50A0A075B6I6 118 aa3.43□□□□□ -1.86
HMGB1P20-201ENST00000402555 TMEM238C9JI98 176 aa3.43□□□□□ -1.86
HMGB1P20-201ENST00000402555 LEPROTL1O95214 131 aa3.43□□□□□ -1.86
HMGB1P20-201ENST00000402555 SMIM13P0DJ93 91 aa3.43□□□□□ -1.86
HMGB1P20-201ENST00000402555 RPL28P46779 137 aaKnown RBP3.43□□□□□ -1.86
HMGB1P20-201ENST00000402555 UBE2AP49459 152 aa3.43□□□□□ -1.86
HMGB1P20-201ENST00000402555 TSPEAR-AS2P59090 65 aa3.43□□□□□ -1.86
HMGB1P20-201ENST00000402555 COX17Q14061 63 aa3.43□□□□□ -1.86
HMGB1P20-201ENST00000402555 PMCHL2Q9BQD1 86 aa3.43□□□□□ -1.86
HMGB1P20-201ENST00000402555 ANAPC11Q9NYG5 84 aa3.43□□□□□ -1.86
HMGB1P20-201ENST00000402555 A0A087X002 238 aa3.42□□□□□ -1.86
HMGB1P20-201ENST00000402555 B5MCH6 92 aa3.42□□□□□ -1.86
HMGB1P20-201ENST00000402555 PRLHP81277 87 aa3.42□□□□□ -1.86
HMGB1P20-201ENST00000402555 RPL24P83731 157 aaKnown RBP3.42□□□□□ -1.86
HMGB1P20-201ENST00000402555 MEIG1Q5JSS6 88 aa3.42□□□□□ -1.86
HMGB1P20-201ENST00000402555 KRTAP13-1Q8IUC0 172 aa3.42□□□□□ -1.86
HMGB1P20-201ENST00000402555 TMEM126AQ9H061 195 aa3.42□□□□□ -1.86
HMGB1P20-201ENST00000402555 NDUFA12Q9UI09 145 aa3.42□□□□□ -1.86
HMGB1P20-201ENST00000402555 M0R378 163 aa3.41□□□□□ -1.86
HMGB1P20-201ENST00000402555 NCR3O14931 201 aa3.41□□□□□ -1.86
HMGB1P20-201ENST00000402555 RPL13AP40429 203 aaKnown RBP3.41□□□□□ -1.86
HMGB1P20-201ENST00000402555 SFTA2Q6UW10 78 aa3.41□□□□□ -1.86
HMGB1P20-201ENST00000402555 FAM19A1Q7Z5A9 133 aa3.41□□□□□ -1.86
HMGB1P20-201ENST00000402555 BOD1L2Q8IYS8 172 aa3.41□□□□□ -1.86
HMGB1P20-201ENST00000402555 MIR7-3HGQ8N6C7 128 aa3.41□□□□□ -1.86
HMGB1P20-201ENST00000402555 DAND5Q8N907 189 aa3.41□□□□□ -1.86
HMGB1P20-201ENST00000402555 HSPB8Q9UJY1 196 aa3.41□□□□□ -1.86
HMGB1P20-201ENST00000402555 LPAP08519 4548 aa3.41□□□□□ -1.86
HMGB1P20-201ENST00000402555 RNF213Q63HN8 5207 aa3.41□□□□□ -1.86
HMGB1P20-201ENST00000402555 LEPROTO15243 131 aa3.4□□□□□ -1.87
HMGB1P20-201ENST00000402555 HIST1H2BKO60814 126 aa3.4□□□□□ -1.87
HMGB1P20-201ENST00000402555 ATP6V1G1O75348 118 aa3.4□□□□□ -1.87
HMGB1P20-201ENST00000402555 DPM2O94777 84 aa3.4□□□□□ -1.87
HMGB1P20-201ENST00000402555 TSPAN13O95857 204 aa3.4□□□□□ -1.87
HMGB1P20-201ENST00000402555 HIST1H2BJP06899 126 aa3.4□□□□□ -1.87
HMGB1P20-201ENST00000402555 HIST1H2BOP23527 126 aa3.4□□□□□ -1.87
HMGB1P20-201ENST00000402555 PLNP26678 52 aa3.4□□□□□ -1.87
HMGB1P20-201ENST00000402555 HIST1H2BBP33778 126 aa3.4□□□□□ -1.87
HMGB1P20-201ENST00000402555 HIST1H2BDP58876 126 aa3.4□□□□□ -1.87
HMGB1P20-201ENST00000402555 HIST1H2BCP62807 126 aa3.4□□□□□ -1.87
HMGB1P20-201ENST00000402555 HIST2H2BEQ16778 126 aa3.4□□□□□ -1.87
HMGB1P20-201ENST00000402555 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P20-201ENST00000402555 HIST1H2BHQ93079 126 aa3.4□□□□□ -1.87
HMGB1P20-201ENST00000402555 HIST1H2BNQ99877 126 aa3.4□□□□□ -1.87
HMGB1P20-201ENST00000402555 HIST1H2BMQ99879 126 aa3.4□□□□□ -1.87
HMGB1P20-201ENST00000402555 MYMXA0A1B0GTQ4 84 aa3.39□□□□□ -1.87
HMGB1P20-201ENST00000402555 J3QQQ9 107 aa3.39□□□□□ -1.87
HMGB1P20-201ENST00000402555 IGKCP01834 107 aa3.39□□□□□ -1.87
HMGB1P20-201ENST00000402555 CRYGAP11844 174 aa3.39□□□□□ -1.87
HMGB1P20-201ENST00000402555 HERV-K104P63124 156 aa3.39□□□□□ -1.87
HMGB1P20-201ENST00000402555 KRTAP13-2Q52LG2 175 aa3.39□□□□□ -1.87
HMGB1P20-201ENST00000402555 TYMSOSQ8TAI1 123 aa3.39□□□□□ -1.87
HMGB1P20-201ENST00000402555 PLEKHB2Q96CS7 222 aa3.39□□□□□ -1.87
HMGB1P20-201ENST00000402555 MAP1LC3CQ9BXW4 147 aa3.39□□□□□ -1.87
HMGB1P20-201ENST00000402555 TRBV10-3A0A0K0K1G6 114 aa3.38□□□□□ -1.87
HMGB1P20-201ENST00000402555 LGALS3P17931 250 aaKnown RBP3.38□□□□□ -1.87
HMGB1P20-201ENST00000402555 HERVK_113P61574 105 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms