RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 CRYGAP11844 174 aa9.48□□□□□ -0.89
CACNA1C-211ENST00000399617 TRBV7-7A0A0K0K1E9 115 aa9.48□□□□□ -0.89
CACNA1C-211ENST00000399617 C9orf92A6NGG3 77 aa9.47□□□□□ -0.89
CACNA1C-211ENST00000399617 Q8NAQ8 132 aa9.47□□□□□ -0.89
CACNA1C-211ENST00000399617 ST20-AS1Q8NBB2 130 aa9.47□□□□□ -0.89
CACNA1C-211ENST00000399617 CNFNQ9BYD5 112 aa9.47□□□□□ -0.89
CACNA1C-211ENST00000399617 Q96NJ1 140 aa9.47□□□□□ -0.89
CACNA1C-211ENST00000399617 EML5Q05BV3 1969 aa9.46□□□□□ -0.89
CACNA1C-211ENST00000399617 Q6ZRP5 223 aa9.46□□□□□ -0.9
CACNA1C-211ENST00000399617 EPM2AB3EWF7 344 aa9.45□□□□□ -0.9
CACNA1C-211ENST00000399617 SPINT4Q6UDR6 99 aa9.45□□□□□ -0.9
CACNA1C-211ENST00000399617 COL27A1Q8IZC6 1860 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-211ENST00000399617 PTPRBP23467 1997 aa9.43□□□□□ -0.9
CACNA1C-211ENST00000399617 ZFYVE26Q68DK2 2539 aa9.43□□□□□ -0.9
CACNA1C-211ENST00000399617 ZNF462Q96JM2 2506 aa9.42□□□□□ -0.9
CACNA1C-211ENST00000399617 KIF25-AS1Q9Y6Z4 181 aa9.41□□□□□ -0.9
CACNA1C-211ENST00000399617 YPEL4Q96NS1 127 aa9.4□□□□□ -0.9
CACNA1C-211ENST00000399617 hDV103S1A0JD37 113 aa9.4□□□□□ -0.91
CACNA1C-211ENST00000399617 SPAG11AQ6PDA7 123 aa9.39□□□□□ -0.91
CACNA1C-211ENST00000399617 ANAPC11Q9NYG5 84 aa9.38□□□□□ -0.91
CACNA1C-211ENST00000399617 IGLV8-61A0A075B6I0 122 aa9.38□□□□□ -0.91
CACNA1C-211ENST00000399617 ABCA12Q86UK0 2595 aa9.38□□□□□ -0.91
CACNA1C-211ENST00000399617 CDIP1Q9H305 208 aa9.37□□□□□ -0.91
CACNA1C-211ENST00000399617 ATP11AUNQ6ZP68 121 aa9.37□□□□□ -0.91
CACNA1C-211ENST00000399617 F8WDY8 70 aa9.37□□□□□ -0.91
CACNA1C-211ENST00000399617 LINC00310P59036 64 aa9.36□□□□□ -0.91
CACNA1C-211ENST00000399617 FN1P02751 2386 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-211ENST00000399617 SMIM29Q86T20 159 aa9.36□□□□□ -0.91
CACNA1C-211ENST00000399617 C2CD3Q4AC94 2353 aa9.36□□□□□ -0.91
CACNA1C-211ENST00000399617 TLN1Q9Y490 2541 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-211ENST00000399617 LINC00313P59037 77 aa9.35□□□□□ -0.91
CACNA1C-211ENST00000399617 A0A096LNJ9 63 aa9.35□□□□□ -0.91
CACNA1C-211ENST00000399617 TM2D3Q9BRN9 247 aa9.35□□□□□ -0.91
CACNA1C-211ENST00000399617 C1orf64Q8NEQ6 169 aa9.33□□□□□ -0.92
CACNA1C-211ENST00000399617 IGHV3OR16-9A0A0B4J2B5 98 aa9.32□□□□□ -0.92
CACNA1C-211ENST00000399617 A0A1B0GU69 56 aa9.32□□□□□ -0.92
CACNA1C-211ENST00000399617 PRO0628Q9UI54 55 aa9.32□□□□□ -0.92
CACNA1C-211ENST00000399617 SPATA3Q8NHX4 192 aa9.31□□□□□ -0.92
CACNA1C-211ENST00000399617 LINC00476Q8WZB0 136 aa9.31□□□□□ -0.92
CACNA1C-211ENST00000399617 A0A0G2JQZ4 141 aa9.3□□□□□ -0.92
CACNA1C-211ENST00000399617 A0A1W2PNN7 141 aa9.3□□□□□ -0.92
CACNA1C-211ENST00000399617 Q8NBF4 154 aa9.29□□□□□ -0.92
CACNA1C-211ENST00000399617 TMEM254Q8TBM7 123 aa9.29□□□□□ -0.92
CACNA1C-211ENST00000399617 PCSK5Q92824 1860 aa9.29□□□□□ -0.92
CACNA1C-211ENST00000399617 CHD8Q9HCK8 2581 aa9.29□□□□□ -0.92
CACNA1C-211ENST00000399617 FAM19A4Q96LR4 140 aa9.28□□□□□ -0.92
CACNA1C-211ENST00000399617 LINC00846Q9NV44 126 aa9.28□□□□□ -0.92
CACNA1C-211ENST00000399617 BCE1O60756 84 aa9.28□□□□□ -0.92
CACNA1C-211ENST00000399617 CXCL6P80162 114 aa9.28□□□□□ -0.92
CACNA1C-211ENST00000399617 H3BNG1 76 aa9.27□□□□□ -0.93
CACNA1C-211ENST00000399617 TLN2Q9Y4G6 2542 aa9.27□□□□□ -0.93
CACNA1C-211ENST00000399617 LINC01561Q8N1V8 128 aa9.26□□□□□ -0.93
CACNA1C-211ENST00000399617 DSCR10P59022 87 aa9.26□□□□□ -0.93
CACNA1C-211ENST00000399617 SPTBN4Q9H254 2564 aa9.24□□□□□ -0.93
CACNA1C-211ENST00000399617 COX8CQ7Z4L0 72 aa9.24□□□□□ -0.93
CACNA1C-211ENST00000399617 CASC10Q5T4H9 136 aa9.24□□□□□ -0.93
CACNA1C-211ENST00000399617 A0A087WTM6 91 aa9.23□□□□□ -0.93
CACNA1C-211ENST00000399617 ANKRD11Q6UB99 2663 aaPredicted RBP9.23□□□□□ -0.93
CACNA1C-211ENST00000399617 Q6ZRX8 168 aa9.23□□□□□ -0.93
CACNA1C-211ENST00000399617 FAM218AQ96MZ4 157 aa9.23□□□□□ -0.93
CACNA1C-211ENST00000399617 OBSCN-AS1Q96MR7 158 aa9.23□□□□□ -0.93
CACNA1C-211ENST00000399617 C15orf56Q8N910 161 aa9.22□□□□□ -0.93
CACNA1C-211ENST00000399617 LINC00304Q8N9R0 145 aa9.22□□□□□ -0.93
CACNA1C-211ENST00000399617 C4orf26Q17RF5 130 aa9.22□□□□□ -0.93
CACNA1C-211ENST00000399617 C8orf87E5RJ46 101 aa9.21□□□□□ -0.93
CACNA1C-211ENST00000399617 PCNTO95613 3336 aa9.21□□□□□ -0.93
CACNA1C-211ENST00000399617 IGLV5-39A0A0G2JS06 123 aa9.21□□□□□ -0.94
CACNA1C-211ENST00000399617 ELOF1P60002 83 aaKnown RBP9.2□□□□□ -0.94
CACNA1C-211ENST00000399617 C19orf73Q9NVV2 129 aa9.2□□□□□ -0.94
CACNA1C-211ENST00000399617 LINC00528Q8N1L1 170 aa9.2□□□□□ -0.94
CACNA1C-211ENST00000399617 GVQW2A0A096LPI5 108 aaPredicted RBP9.2□□□□□ -0.94
CACNA1C-211ENST00000399617 CEP295Q9C0D2 2601 aa9.18□□□□□ -0.94
CACNA1C-211ENST00000399617 ACYP2P14621 99 aa9.18□□□□□ -0.94
CACNA1C-211ENST00000399617 POLQO75417 2590 aa9.18□□□□□ -0.94
CACNA1C-211ENST00000399617 MYO9AB2RTY4 2548 aa9.17□□□□□ -0.94
CACNA1C-211ENST00000399617 KRTAP1-3Q8IUG1 177 aa9.17□□□□□ -0.94
CACNA1C-211ENST00000399617 FASNP49327 2511 aaKnown RBP9.17□□□□□ -0.94
CACNA1C-211ENST00000399617 CSNK1G2-AS1Q8NCQ2 148 aa9.17□□□□□ -0.94
CACNA1C-211ENST00000399617 DNAH12Q6ZR08 3092 aa9.16□□□□□ -0.94
CACNA1C-211ENST00000399617 A0A096LNT2 108 aa9.16□□□□□ -0.94
CACNA1C-211ENST00000399617 SSBP3-AS1Q7Z2R9 100 aa9.15□□□□□ -0.94
CACNA1C-211ENST00000399617 LINC01554Q52M75 96 aa9.15□□□□□ -0.95
CACNA1C-211ENST00000399617 SETD2Q9BYW2 2564 aaPredicted RBP9.14□□□□□ -0.95
CACNA1C-211ENST00000399617 TNP2Q05952 138 aa9.14□□□□□ -0.95
CACNA1C-211ENST00000399617 IGLV6-57P01721 117 aa9.13□□□□□ -0.95
CACNA1C-211ENST00000399617 USP9XQ93008 2570 aaPredicted RBP9.13□□□□□ -0.95
CACNA1C-211ENST00000399617 APLNQ9ULZ1 77 aa9.13□□□□□ -0.95
CACNA1C-211ENST00000399617 ACANP16112 2415 aa9.12□□□□□ -0.95
CACNA1C-211ENST00000399617 FLG2Q5D862 2391 aaPredicted RBP9.11□□□□□ -0.95
CACNA1C-211ENST00000399617 M0R2T5 61 aa9.1□□□□□ -0.95
CACNA1C-211ENST00000399617 KRTAP1-1Q07627 177 aa9.1□□□□□ -0.95
CACNA1C-211ENST00000399617 IGLV5-37A0A075B6J1 123 aa9.09□□□□□ -0.95
CACNA1C-211ENST00000399617 ANKRD17O75179 2603 aaKnown RBP9.09□□□□□ -0.95
CACNA1C-211ENST00000399617 IGLV1-50A0A075B6I6 118 aa9.09□□□□□ -0.95
CACNA1C-211ENST00000399617 LINC00336Q6ZUF6 198 aa9.08□□□□□ -0.96
CACNA1C-211ENST00000399617 F8P00451 2351 aa9.07□□□□□ -0.96
CACNA1C-211ENST00000399617 K7EQZ3 153 aa9.07□□□□□ -0.96
CACNA1C-211ENST00000399617 GIG44P09565 113 aaPredicted RBP9.07□□□□□ -0.96
CACNA1C-211ENST00000399617 C9orf129Q5T035 196 aaKnown RBP9.07□□□□□ -0.96
CACNA1C-211ENST00000399617 PSORS1C2Q9UIG4 136 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms