RNA–Protein interactions for RNA: ENST00000398645.6

KDM2A-202, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-202ENST00000398645 PRO0461Q9UI25 63 aa13.36□□□□□ -0.27
KDM2A-202ENST00000398645 LINC01561Q8N1V8 128 aa13.36□□□□□ -0.27
KDM2A-202ENST00000398645 COX8CQ7Z4L0 72 aa13.35□□□□□ -0.27
KDM2A-202ENST00000398645 TYMSOSQ8TAI1 123 aa13.35□□□□□ -0.27
KDM2A-202ENST00000398645 K7EQZ3 153 aa13.34□□□□□ -0.27
KDM2A-202ENST00000398645 RTL8CO15255 209 aa13.33□□□□□ -0.28
KDM2A-202ENST00000398645 LINC00315P59091 139 aa13.32□□□□□ -0.28
KDM2A-202ENST00000398645 COL27A1Q8IZC6 1860 aaPredicted RBP13.32□□□□□ -0.28
KDM2A-202ENST00000398645 TP53AIP1Q9HCN2 124 aa13.31□□□□□ -0.28
KDM2A-202ENST00000398645 C9orf92A6NGG3 77 aa13.3□□□□□ -0.28
KDM2A-202ENST00000398645 COA5Q86WW8 74 aa13.3□□□□□ -0.28
KDM2A-202ENST00000398645 TRAV22A0A0B4J277 110 aa13.3□□□□□ -0.28
KDM2A-202ENST00000398645 F8WDY8 70 aa13.3□□□□□ -0.28
KDM2A-202ENST00000398645 SONP18583 2426 aaKnown RBP13.29□□□□□ -0.28
KDM2A-202ENST00000398645 LINC01546A6NGU7 62 aa13.29□□□□□ -0.28
KDM2A-202ENST00000398645 LINC01600Q96MT4 127 aa13.29□□□□□ -0.28
KDM2A-202ENST00000398645 Q6ZRX8 168 aa13.28□□□□□ -0.28
KDM2A-202ENST00000398645 TRBV7-4A0A0J9YYF1 115 aa13.28□□□□□ -0.28
KDM2A-202ENST00000398645 DSCR10P59022 87 aa13.28□□□□□ -0.28
KDM2A-202ENST00000398645 Q6ZRP5 223 aa13.25□□□□□ -0.29
KDM2A-202ENST00000398645 IGLV6-57P01721 117 aa13.25□□□□□ -0.29
KDM2A-202ENST00000398645 ATRXP46100 2492 aa13.23□□□□□ -0.29
KDM2A-202ENST00000398645 Q8NBF4 154 aa13.23□□□□□ -0.29
KDM2A-202ENST00000398645 ANKHD1Q8IWZ3 2542 aaKnown RBP13.22□□□□□ -0.29
KDM2A-202ENST00000398645 LOC110117498A0A087WWA1 95 aa13.2□□□□□ -0.3
KDM2A-202ENST00000398645 A0A0D9SG42 100 aa13.18□□□□□ -0.3
KDM2A-202ENST00000398645 LINC00588Q9Y4M8 146 aa13.18□□□□□ -0.3
KDM2A-202ENST00000398645 BDP1A6H8Y1 2624 aa13.18□□□□□ -0.3
KDM2A-202ENST00000398645 C16orf90A8MZG2 172 aa13.18□□□□□ -0.3
KDM2A-202ENST00000398645 VPREB1P12018 145 aa13.18□□□□□ -0.3
KDM2A-202ENST00000398645 ANAPC11Q9NYG5 84 aa13.17□□□□□ -0.3
KDM2A-202ENST00000398645 LINC01554Q52M75 96 aa13.15□□□□□ -0.3
KDM2A-202ENST00000398645 PRO3102Q9H379 93 aa13.14□□□□□ -0.31
KDM2A-202ENST00000398645 OBSCN-AS1Q96MR7 158 aa13.13□□□□□ -0.31
KDM2A-202ENST00000398645 C2CD3Q4AC94 2353 aa13.13□□□□□ -0.31
KDM2A-202ENST00000398645 RPS28P62857 69 aaKnown RBP13.13□□□□□ -0.31
KDM2A-202ENST00000398645 DNAH10OSP0CZ25 163 aa13.12□□□□□ -0.31
KDM2A-202ENST00000398645 FAM229AH3BQW9 127 aa13.12□□□□□ -0.31
KDM2A-202ENST00000398645 IGLV5-45A0A087WSX0 123 aa13.11□□□□□ -0.31
KDM2A-202ENST00000398645 A8MWP4 228 aa13.11□□□□□ -0.31
KDM2A-202ENST00000398645 C9orf129Q5T035 196 aaKnown RBP13.1□□□□□ -0.31
KDM2A-202ENST00000398645 EIF4EBP3O60516 100 aaPredicted RBP13.1□□□□□ -0.31
KDM2A-202ENST00000398645 MIR22HGQ0VDD5 57 aa13.1□□□□□ -0.31
KDM2A-202ENST00000398645 MRPL34Q9BQ48 92 aaKnown RBP13.09□□□□□ -0.31
KDM2A-202ENST00000398645 LITAFQ99732 161 aa13.09□□□□□ -0.31
KDM2A-202ENST00000398645 BCE1O60756 84 aa13.08□□□□□ -0.31
KDM2A-202ENST00000398645 COX6B2Q6YFQ2 88 aa13.08□□□□□ -0.32
KDM2A-202ENST00000398645 NBDYA0A0U1RRE5 68 aa13.07□□□□□ -0.32
KDM2A-202ENST00000398645 PIEZO2Q9H5I5 2752 aa13.07□□□□□ -0.32
KDM2A-202ENST00000398645 CRIPTQ9P021 101 aa13.06□□□□□ -0.32
KDM2A-202ENST00000398645 ABCA2Q9BZC7 2435 aa13.05□□□□□ -0.32
KDM2A-202ENST00000398645 LINC00336Q6ZUF6 198 aa13.04□□□□□ -0.32
KDM2A-202ENST00000398645 IGFL1Q6UW32 110 aa13.04□□□□□ -0.32
KDM2A-202ENST00000398645 NOTCH2Q04721 2471 aa13.04□□□□□ -0.32
KDM2A-202ENST00000398645 SMR3BP02814 79 aaPredicted RBP13.03□□□□□ -0.32
KDM2A-202ENST00000398645 H3BPC8 53 aa13.02□□□□□ -0.33
KDM2A-202ENST00000398645 UQCR11O14957 56 aa13.01□□□□□ -0.33
KDM2A-202ENST00000398645 Q8NAQ8 132 aa13.01□□□□□ -0.33
KDM2A-202ENST00000398645 LOC101927531A0A1B0GV80 90 aa13□□□□□ -0.33
KDM2A-202ENST00000398645 J3QL48 77 aa13□□□□□ -0.33
KDM2A-202ENST00000398645 GOLGB1Q14789 3259 aaKnown RBP13□□□□□ -0.33
KDM2A-202ENST00000398645 KRTAP24-1Q3LI83 254 aa13□□□□□ -0.33
KDM2A-202ENST00000398645 C15orf56Q8N910 161 aa12.99□□□□□ -0.33
KDM2A-202ENST00000398645 Q8N1X5 172 aa12.98□□□□□ -0.33
KDM2A-202ENST00000398645 GVQW2A0A096LPI5 108 aaPredicted RBP12.97□□□□□ -0.33
KDM2A-202ENST00000398645 IGLV1-50A0A075B6I6 118 aa12.96□□□□□ -0.34
KDM2A-202ENST00000398645 WDR87Q6ZQQ6 2873 aa12.95□□□□□ -0.34
KDM2A-202ENST00000398645 C8orf17Q9NRJ1 99 aa12.94□□□□□ -0.34
KDM2A-202ENST00000398645 PRR15Q8IV56 129 aa12.92□□□□□ -0.34
KDM2A-202ENST00000398645 ACACBO00763 2458 aa12.9□□□□□ -0.35
KDM2A-202ENST00000398645 ZNF575Q86XF7 245 aa12.89□□□□□ -0.35
KDM2A-202ENST00000398645 Q8N377 158 aa12.87□□□□□ -0.35
KDM2A-202ENST00000398645 COL4A2P08572 1712 aa12.86□□□□□ -0.35
KDM2A-202ENST00000398645 KRTAP10-11P60412 298 aa12.85□□□□□ -0.35
KDM2A-202ENST00000398645 CYP4F30PQ9H0H9 118 aa12.85□□□□□ -0.35
KDM2A-202ENST00000398645 CCDC168Q8NDH2 2452 aa12.84□□□□□ -0.35
KDM2A-202ENST00000398645 A0A1B0GVX0 72 aa12.83□□□□□ -0.36
KDM2A-202ENST00000398645 KTN1-AS1Q86SY8 53 aa12.83□□□□□ -0.36
KDM2A-202ENST00000398645 DOPEY1Q5JWR5 2465 aa12.83□□□□□ -0.36
KDM2A-202ENST00000398645 IGLV5-48A0A075B6I7 105 aa12.83□□□□□ -0.36
KDM2A-202ENST00000398645 IGLV5-37A0A075B6J1 123 aa12.83□□□□□ -0.36
KDM2A-202ENST00000398645 H3BNG1 76 aa12.82□□□□□ -0.36
KDM2A-202ENST00000398645 LINC00304Q8N9R0 145 aa12.82□□□□□ -0.36
KDM2A-202ENST00000398645 A0A1B0GW54 56 aa12.82□□□□□ -0.36
KDM2A-202ENST00000398645 H7BZZ5 65 aa12.81□□□□□ -0.36
KDM2A-202ENST00000398645 WIPF1O43516 503 aa12.8□□□□□ -0.36
KDM2A-202ENST00000398645 LINC00528Q8N1L1 170 aa12.79□□□□□ -0.36
KDM2A-202ENST00000398645 CASC10Q5T4H9 136 aa12.79□□□□□ -0.36
KDM2A-202ENST00000398645 C10orf142B7Z368 130 aa12.79□□□□□ -0.36
KDM2A-202ENST00000398645 ERC2-IT1O76042 136 aa12.78□□□□□ -0.36
KDM2A-202ENST00000398645 NAV2Q8IVL1 2488 aa12.78□□□□□ -0.36
KDM2A-202ENST00000398645 KCNQ1DNQ9H478 68 aa12.78□□□□□ -0.36
KDM2A-202ENST00000398645 CD164Q04900 197 aa12.76□□□□□ -0.37
KDM2A-202ENST00000398645 EP400Q96L91 3159 aa12.75□□□□□ -0.37
KDM2A-202ENST00000398645 CDC42SE1Q9NRR8 79 aa12.75□□□□□ -0.37
KDM2A-202ENST00000398645 PCSK5Q92824 1860 aa12.74□□□□□ -0.37
KDM2A-202ENST00000398645 LCA10Q71F78 164 aa12.74□□□□□ -0.37
KDM2A-202ENST00000398645 CENPFP49454 3210 aa12.73□□□□□ -0.37
KDM2A-202ENST00000398645 FN1P02751 2386 aaKnown RBP12.71□□□□□ -0.37
KDM2A-202ENST00000398645 CACNA1AO00555 2505 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms