RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ATP5EP56381 51 aaPredicted RBP9.76□□□□□ -0.85
PCDHGA11-201ENST00000398587 TRAV7A0A075B6U4 112 aa9.75□□□□□ -0.85
PCDHGA11-201ENST00000398587 C22orf24Q9Y442 160 aa9.75□□□□□ -0.85
PCDHGA11-201ENST00000398587 BRCA2P51587 3418 aa9.75□□□□□ -0.85
PCDHGA11-201ENST00000398587 IGLV5-52A0A0A0MRZ9 124 aa9.75□□□□□ -0.85
PCDHGA11-201ENST00000398587 CDIP1Q9H305 208 aa9.75□□□□□ -0.85
PCDHGA11-201ENST00000398587 ATRQ13535 2644 aa9.75□□□□□ -0.85
PCDHGA11-201ENST00000398587 MGAQ8IWI9 3026 aa9.73□□□□□ -0.85
PCDHGA11-201ENST00000398587 Q8N3U1 123 aa9.73□□□□□ -0.85
PCDHGA11-201ENST00000398587 Q9BRP9 147 aa9.73□□□□□ -0.85
PCDHGA11-201ENST00000398587 Q6ZVQ6 151 aa9.73□□□□□ -0.85
PCDHGA11-201ENST00000398587 C1orf134Q5TEV5 83 aa9.72□□□□□ -0.85
PCDHGA11-201ENST00000398587 LITAFQ99732 161 aa9.72□□□□□ -0.85
PCDHGA11-201ENST00000398587 LAMA2P24043 3122 aaKnown RBP9.71□□□□□ -0.86
PCDHGA11-201ENST00000398587 FAM218AQ96MZ4 157 aa9.71□□□□□ -0.86
PCDHGA11-201ENST00000398587 C19orf73Q9NVV2 129 aa9.71□□□□□ -0.86
PCDHGA11-201ENST00000398587 A0A087WSZ3 146 aa9.69□□□□□ -0.86
PCDHGA11-201ENST00000398587 PRLHP81277 87 aa9.69□□□□□ -0.86
PCDHGA11-201ENST00000398587 FAM30AQ9NZY2 134 aa9.69□□□□□ -0.86
PCDHGA11-201ENST00000398587 A0A0C4DFX4 3053 aa9.69□□□□□ -0.86
PCDHGA11-201ENST00000398587 GIG44P09565 113 aaPredicted RBP9.69□□□□□ -0.86
PCDHGA11-201ENST00000398587 TRBV7-7A0A0K0K1E9 115 aa9.68□□□□□ -0.86
PCDHGA11-201ENST00000398587 CASC2Q6XLA1 102 aa9.68□□□□□ -0.86
PCDHGA11-201ENST00000398587 PRUNE2Q8WUY3 3088 aa9.68□□□□□ -0.86
PCDHGA11-201ENST00000398587 LINC00167Q96N53 147 aa9.68□□□□□ -0.86
PCDHGA11-201ENST00000398587 TRBV7-6A0A0J9YX20 115 aa9.68□□□□□ -0.86
PCDHGA11-201ENST00000398587 KRTAP1-3Q8IUG1 177 aa9.68□□□□□ -0.86
PCDHGA11-201ENST00000398587 CFAP54Q96N23 3096 aa9.67□□□□□ -0.86
PCDHGA11-201ENST00000398587 MAST4O15021 2626 aa9.67□□□□□ -0.86
PCDHGA11-201ENST00000398587 MDFIQ99750 246 aa9.67□□□□□ -0.86
PCDHGA11-201ENST00000398587 SMCR5Q8TEV8 140 aa9.67□□□□□ -0.86
PCDHGA11-201ENST00000398587 LINC01547P58512 204 aaPredicted RBP9.66□□□□□ -0.86
PCDHGA11-201ENST00000398587 MPLKIPQ8TAP9 179 aa9.66□□□□□ -0.86
PCDHGA11-201ENST00000398587 GVQW2A0A096LPI5 108 aaPredicted RBP9.66□□□□□ -0.86
PCDHGA11-201ENST00000398587 LINC00588Q9Y4M8 146 aa9.65□□□□□ -0.86
PCDHGA11-201ENST00000398587 KIAA0087Q14695 138 aa9.65□□□□□ -0.87
PCDHGA11-201ENST00000398587 ELOF1P60002 83 aaKnown RBP9.64□□□□□ -0.87
PCDHGA11-201ENST00000398587 SEC61GP60059 68 aa9.64□□□□□ -0.87
PCDHGA11-201ENST00000398587 SPATA3Q8NHX4 192 aa9.64□□□□□ -0.87
PCDHGA11-201ENST00000398587 CIRBP-AS1Q8TBR5 109 aa9.63□□□□□ -0.87
PCDHGA11-201ENST00000398587 CXCL6P80162 114 aa9.63□□□□□ -0.87
PCDHGA11-201ENST00000398587 PRR4Q16378 134 aa9.63□□□□□ -0.87
PCDHGA11-201ENST00000398587 Q8N9L7 120 aa9.63□□□□□ -0.87
PCDHGA11-201ENST00000398587 LINC00612Q8N6U2 182 aa9.62□□□□□ -0.87
PCDHGA11-201ENST00000398587 BRK1Q8WUW1 75 aa9.62□□□□□ -0.87
PCDHGA11-201ENST00000398587 DNAH10OSP0CZ25 163 aa9.62□□□□□ -0.87
PCDHGA11-201ENST00000398587 WDFY4Q6ZS81 3184 aa9.62□□□□□ -0.87
PCDHGA11-201ENST00000398587 KRTAP10-3P60369 221 aa9.61□□□□□ -0.87
PCDHGA11-201ENST00000398587 LINC00208Q96KT6 92 aa9.61□□□□□ -0.87
PCDHGA11-201ENST00000398587 V9GYY9 64 aa9.61□□□□□ -0.87
PCDHGA11-201ENST00000398587 KRTAP1-1Q07627 177 aa9.6□□□□□ -0.87
PCDHGA11-201ENST00000398587 TRIOO75962 3097 aa9.58□□□□□ -0.88
PCDHGA11-201ENST00000398587 PRR34Q9NV39 138 aa9.58□□□□□ -0.88
PCDHGA11-201ENST00000398587 UNC80Q8N2C7 3258 aa9.58□□□□□ -0.88
PCDHGA11-201ENST00000398587 A0A1B0GW54 56 aa9.57□□□□□ -0.88
PCDHGA11-201ENST00000398587 Q6ZRX8 168 aa9.57□□□□□ -0.88
PCDHGA11-201ENST00000398587 IGHV6-1A0A0B4J1U7 121 aa9.57□□□□□ -0.88
PCDHGA11-201ENST00000398587 NBDYA0A0U1RRE5 68 aa9.57□□□□□ -0.88
PCDHGA11-201ENST00000398587 DEFB116Q30KQ4 102 aa9.57□□□□□ -0.88
PCDHGA11-201ENST00000398587 EIF4EBP3O60516 100 aaPredicted RBP9.56□□□□□ -0.88
PCDHGA11-201ENST00000398587 VPREB1P12018 145 aa9.56□□□□□ -0.88
PCDHGA11-201ENST00000398587 SMIM26A0A096LP01 95 aa9.55□□□□□ -0.88
PCDHGA11-201ENST00000398587 IGLV6-57P01721 117 aa9.55□□□□□ -0.88
PCDHGA11-201ENST00000398587 Q6ZRP5 223 aa9.55□□□□□ -0.88
PCDHGA11-201ENST00000398587 TMEM254Q8TBM7 123 aa9.55□□□□□ -0.88
PCDHGA11-201ENST00000398587 KRTAP10-11P60412 298 aa9.55□□□□□ -0.88
PCDHGA11-201ENST00000398587 Q6ZQT0 140 aa9.55□□□□□ -0.88
PCDHGA11-201ENST00000398587 ZNF575Q86XF7 245 aa9.55□□□□□ -0.88
PCDHGA11-201ENST00000398587 LOC110117498A0A087WWA1 95 aa9.55□□□□□ -0.88
PCDHGA11-201ENST00000398587 C16orf90A8MZG2 172 aa9.55□□□□□ -0.88
PCDHGA11-201ENST00000398587 HCG22E2RYF7 251 aa9.55□□□□□ -0.88
PCDHGA11-201ENST00000398587 SERP1Q9Y6X1 66 aa9.54□□□□□ -0.88
PCDHGA11-201ENST00000398587 Q8NBF4 154 aa9.52□□□□□ -0.89
PCDHGA11-201ENST00000398587 DSPP15924 2871 aaKnown RBP9.52□□□□□ -0.89
PCDHGA11-201ENST00000398587 K7EIL1 84 aa9.51□□□□□ -0.89
PCDHGA11-201ENST00000398587 AKAP13Q12802 2813 aa9.51□□□□□ -0.89
PCDHGA11-201ENST00000398587 BCE1O60756 84 aa9.51□□□□□ -0.89
PCDHGA11-201ENST00000398587 PHF5AQ7RTV0 110 aaKnown RBP9.5□□□□□ -0.89
PCDHGA11-201ENST00000398587 SPTSSBQ8NFR3 76 aa9.49□□□□□ -0.89
PCDHGA11-201ENST00000398587 H0Y9P7 68 aa9.48□□□□□ -0.89
PCDHGA11-201ENST00000398587 PRR15LQ9BU68 103 aa9.48□□□□□ -0.89
PCDHGA11-201ENST00000398587 LINC00476Q8WZB0 136 aa9.47□□□□□ -0.89
PCDHGA11-201ENST00000398587 EPM2AB3EWF7 344 aa9.46□□□□□ -0.89
PCDHGA11-201ENST00000398587 ST20-AS1Q8NBB2 130 aa9.46□□□□□ -0.89
PCDHGA11-201ENST00000398587 VPS13AQ96RL7 3174 aa9.46□□□□□ -0.9
PCDHGA11-201ENST00000398587 RTL8CO15255 209 aa9.45□□□□□ -0.9
PCDHGA11-201ENST00000398587 KCNQ1DNQ9H478 68 aa9.45□□□□□ -0.9
PCDHGA11-201ENST00000398587 C15orf56Q8N910 161 aa9.45□□□□□ -0.9
PCDHGA11-201ENST00000398587 LIMD2Q9BT23 127 aa9.45□□□□□ -0.9
PCDHGA11-201ENST00000398587 CHTF8P0CG12 524 aa9.44□□□□□ -0.9
PCDHGA11-201ENST00000398587 CRYGAP11844 174 aa9.44□□□□□ -0.9
PCDHGA11-201ENST00000398587 MOBPQ13875 183 aa9.44□□□□□ -0.9
PCDHGA11-201ENST00000398587 SMIM29Q86T20 159 aa9.44□□□□□ -0.9
PCDHGA11-201ENST00000398587 MAP1AP78559 2803 aaPredicted RBP9.44□□□□□ -0.9
PCDHGA11-201ENST00000398587 SERTAD4-AS1Q5TG53 156 aa9.44□□□□□ -0.9
PCDHGA11-201ENST00000398587 LINC00528Q8N1L1 170 aa9.44□□□□□ -0.9
PCDHGA11-201ENST00000398587 XIRP2A4UGR9 3374 aa9.44□□□□□ -0.9
PCDHGA11-201ENST00000398587 CHD6Q8TD26 2715 aa9.43□□□□□ -0.9
PCDHGA11-201ENST00000398587 PCOTHQ58A44 107 aa9.43□□□□□ -0.9
PCDHGA11-201ENST00000398587 hDV103S1A0JD37 113 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms