RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 FN1P02751 2386 aaKnown RBP7.79□□□□□ -1.16
TTC28-201ENST00000397906 ANKRD11Q6UB99 2663 aaPredicted RBP7.79□□□□□ -1.16
TTC28-201ENST00000397906 CRYGAP11844 174 aa7.79□□□□□ -1.16
TTC28-201ENST00000397906 LINC01561Q8N1V8 128 aa7.79□□□□□ -1.16
TTC28-201ENST00000397906 TRAV7A0A075B6U4 112 aa7.78□□□□□ -1.16
TTC28-201ENST00000397906 KIF25-AS1Q9Y6Z4 181 aa7.78□□□□□ -1.16
TTC28-201ENST00000397906 TLN2Q9Y4G6 2542 aa7.78□□□□□ -1.16
TTC28-201ENST00000397906 IGHV3OR16-9A0A0B4J2B5 98 aa7.77□□□□□ -1.16
TTC28-201ENST00000397906 Q6ZRP5 223 aa7.77□□□□□ -1.16
TTC28-201ENST00000397906 EPM2AB3EWF7 344 aa7.77□□□□□ -1.17
TTC28-201ENST00000397906 KRTAP10-11P60412 298 aa7.77□□□□□ -1.17
TTC28-201ENST00000397906 hDV103S1A0JD37 113 aa7.77□□□□□ -1.17
TTC28-201ENST00000397906 PSPHP1O15172 72 aa7.77□□□□□ -1.17
TTC28-201ENST00000397906 H3BNG1 76 aa7.77□□□□□ -1.17
TTC28-201ENST00000397906 RPL37AP61513 92 aaKnown RBP7.76□□□□□ -1.17
TTC28-201ENST00000397906 FAM19A4Q96LR4 140 aa7.76□□□□□ -1.17
TTC28-201ENST00000397906 PLA2G1BP04054 148 aaKnown RBP7.76□□□□□ -1.17
TTC28-201ENST00000397906 SMIM29Q86T20 159 aa7.75□□□□□ -1.17
TTC28-201ENST00000397906 ZNF462Q96JM2 2506 aa7.75□□□□□ -1.17
TTC28-201ENST00000397906 TRBV7-7A0A0K0K1E9 115 aa7.75□□□□□ -1.17
TTC28-201ENST00000397906 FAM168BA1KXE4 195 aa7.75□□□□□ -1.17
TTC28-201ENST00000397906 C1orf64Q8NEQ6 169 aa7.75□□□□□ -1.17
TTC28-201ENST00000397906 DNAH10OSP0CZ25 163 aa7.74□□□□□ -1.17
TTC28-201ENST00000397906 SPTBN4Q9H254 2564 aa7.73□□□□□ -1.17
TTC28-201ENST00000397906 LINC00846Q9NV44 126 aa7.73□□□□□ -1.17
TTC28-201ENST00000397906 IGLV5-39A0A0G2JS06 123 aa7.73□□□□□ -1.17
TTC28-201ENST00000397906 ANKRD17O75179 2603 aaKnown RBP7.73□□□□□ -1.17
TTC28-201ENST00000397906 Q96NJ1 140 aa7.73□□□□□ -1.17
TTC28-201ENST00000397906 K7EIL1 84 aa7.72□□□□□ -1.17
TTC28-201ENST00000397906 ST20-AS1Q8NBB2 130 aa7.72□□□□□ -1.17
TTC28-201ENST00000397906 SMR3BP02814 79 aaPredicted RBP7.72□□□□□ -1.17
TTC28-201ENST00000397906 LINC00313P59037 77 aa7.72□□□□□ -1.17
TTC28-201ENST00000397906 CEP295Q9C0D2 2601 aa7.72□□□□□ -1.17
TTC28-201ENST00000397906 CHD8Q9HCK8 2581 aa7.72□□□□□ -1.17
TTC28-201ENST00000397906 SPATA3Q8NHX4 192 aa7.71□□□□□ -1.18
TTC28-201ENST00000397906 Q6ZRX8 168 aa7.7□□□□□ -1.18
TTC28-201ENST00000397906 Q8NBF4 154 aa7.7□□□□□ -1.18
TTC28-201ENST00000397906 ELOF1P60002 83 aaKnown RBP7.7□□□□□ -1.18
TTC28-201ENST00000397906 LINC00476Q8WZB0 136 aa7.7□□□□□ -1.18
TTC28-201ENST00000397906 COX6B2Q6YFQ2 88 aa7.68□□□□□ -1.18
TTC28-201ENST00000397906 ATP11AUNQ6ZP68 121 aa7.68□□□□□ -1.18
TTC28-201ENST00000397906 TMEM254Q8TBM7 123 aa7.68□□□□□ -1.18
TTC28-201ENST00000397906 KRTAP10-3P60369 221 aa7.67□□□□□ -1.18
TTC28-201ENST00000397906 SETD2Q9BYW2 2564 aaPredicted RBP7.67□□□□□ -1.18
TTC28-201ENST00000397906 GVQW2A0A096LPI5 108 aaPredicted RBP7.66□□□□□ -1.18
TTC28-201ENST00000397906 USP9XQ93008 2570 aaPredicted RBP7.66□□□□□ -1.18
TTC28-201ENST00000397906 FAM218AQ96MZ4 157 aa7.66□□□□□ -1.18
TTC28-201ENST00000397906 CXCL6P80162 114 aa7.65□□□□□ -1.18
TTC28-201ENST00000397906 PMAIP1Q13794 54 aa7.65□□□□□ -1.18
TTC28-201ENST00000397906 BCE1O60756 84 aa7.65□□□□□ -1.18
TTC28-201ENST00000397906 DNAH12Q6ZR08 3092 aa7.65□□□□□ -1.18
TTC28-201ENST00000397906 C9orf92A6NGG3 77 aa7.64□□□□□ -1.19
TTC28-201ENST00000397906 IGLV8-61A0A075B6I0 122 aa7.63□□□□□ -1.19
TTC28-201ENST00000397906 LINC01546A6NGU7 62 aa7.63□□□□□ -1.19
TTC28-201ENST00000397906 SMIM26A0A096LP01 95 aa7.63□□□□□ -1.19
TTC28-201ENST00000397906 SERTAD4-AS1Q5TG53 156 aa7.62□□□□□ -1.19
TTC28-201ENST00000397906 A0A1B0GU69 56 aa7.61□□□□□ -1.19
TTC28-201ENST00000397906 IGLV5-45A0A087WSX0 123 aa7.6□□□□□ -1.19
TTC28-201ENST00000397906 POLQO75417 2590 aa7.6□□□□□ -1.19
TTC28-201ENST00000397906 ACYP2P14621 99 aa7.59□□□□□ -1.19
TTC28-201ENST00000397906 CSNK1G2-AS1Q8NCQ2 148 aa7.59□□□□□ -1.19
TTC28-201ENST00000397906 CDIP1Q9H305 208 aa7.59□□□□□ -1.19
TTC28-201ENST00000397906 TP53AIP1Q9HCN2 124 aa7.59□□□□□ -1.19
TTC28-201ENST00000397906 SPAG11AQ6PDA7 123 aa7.59□□□□□ -1.19
TTC28-201ENST00000397906 C1orf195Q5TG92 126 aa7.57□□□□□ -1.2
TTC28-201ENST00000397906 TM2D3Q9BRN9 247 aa7.57□□□□□ -1.2
TTC28-201ENST00000397906 Q6ZQT0 140 aa7.56□□□□□ -1.2
TTC28-201ENST00000397906 LINC00304Q8N9R0 145 aa7.56□□□□□ -1.2
TTC28-201ENST00000397906 ANAPC11Q9NYG5 84 aa7.56□□□□□ -1.2
TTC28-201ENST00000397906 OBSCN-AS1Q96MR7 158 aa7.55□□□□□ -1.2
TTC28-201ENST00000397906 FASNP49327 2511 aaKnown RBP7.55□□□□□ -1.2
TTC28-201ENST00000397906 ACANP16112 2415 aa7.55□□□□□ -1.2
TTC28-201ENST00000397906 DSCR10P59022 87 aa7.54□□□□□ -1.2
TTC28-201ENST00000397906 MTORP42345 2549 aa7.54□□□□□ -1.2
TTC28-201ENST00000397906 A0A087WTM6 91 aa7.54□□□□□ -1.2
TTC28-201ENST00000397906 C19orf73Q9NVV2 129 aa7.54□□□□□ -1.2
TTC28-201ENST00000397906 VPREB1P12018 145 aa7.54□□□□□ -1.2
TTC28-201ENST00000397906 A0A096LNT2 108 aa7.54□□□□□ -1.2
TTC28-201ENST00000397906 USP9YO00507 2555 aaPredicted RBP7.53□□□□□ -1.2
TTC28-201ENST00000397906 IGLV1-50A0A075B6I6 118 aa7.53□□□□□ -1.2
TTC28-201ENST00000397906 C5orf42Q9H799 3197 aa7.52□□□□□ -1.21
TTC28-201ENST00000397906 TRAV22A0A0B4J277 110 aa7.52□□□□□ -1.21
TTC28-201ENST00000397906 C15orf56Q8N910 161 aa7.51□□□□□ -1.21
TTC28-201ENST00000397906 A0A0G2JQZ4 141 aa7.5□□□□□ -1.21
TTC28-201ENST00000397906 A0A1W2PNN7 141 aa7.5□□□□□ -1.21
TTC28-201ENST00000397906 IGLV6-57P01721 117 aa7.5□□□□□ -1.21
TTC28-201ENST00000397906 PKD1L2Q7Z442 2459 aa7.5□□□□□ -1.21
TTC28-201ENST00000397906 F8P00451 2351 aa7.49□□□□□ -1.21
TTC28-201ENST00000397906 K7EQZ3 153 aa7.49□□□□□ -1.21
TTC28-201ENST00000397906 LOC110117498A0A087WWA1 95 aa7.48□□□□□ -1.21
TTC28-201ENST00000397906 ZNF861PO60384 105 aa7.48□□□□□ -1.21
TTC28-201ENST00000397906 SMCPP49901 116 aaPredicted RBP7.48□□□□□ -1.21
TTC28-201ENST00000397906 A8MWP4 228 aa7.47□□□□□ -1.21
TTC28-201ENST00000397906 PCNTO95613 3336 aa7.47□□□□□ -1.21
TTC28-201ENST00000397906 C9orf129Q5T035 196 aaKnown RBP7.47□□□□□ -1.21
TTC28-201ENST00000397906 TRBV7-4A0A0J9YYF1 115 aa7.46□□□□□ -1.21
TTC28-201ENST00000397906 CASC10Q5T4H9 136 aa7.46□□□□□ -1.21
TTC28-201ENST00000397906 GIG44P09565 113 aaPredicted RBP7.46□□□□□ -1.22
TTC28-201ENST00000397906 KRTAP1-3Q8IUG1 177 aa7.46□□□□□ -1.22
TTC28-201ENST00000397906 IGFL1Q6UW32 110 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms