RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 LINC01006Q8NI28 216 aa3.53□□□□□ -1.84
SSR1-202ENST00000397511 SMIM11BQ8TCY0 68 aa3.53□□□□□ -1.84
SSR1-202ENST00000397511 SNURFQ9Y675 71 aa3.53□□□□□ -1.84
SSR1-202ENST00000397511 LINC00337Q8N6G1 96 aa3.52□□□□□ -1.85
SSR1-202ENST00000397511 RMI2Q96E14 147 aa3.52□□□□□ -1.85
SSR1-202ENST00000397511 SMIM1B2RUZ4 78 aa3.52□□□□□ -1.85
SSR1-202ENST00000397511 GIG44P09565 113 aaPredicted RBP3.52□□□□□ -1.85
SSR1-202ENST00000397511 SND1-IT1Q9HBX3 110 aa3.52□□□□□ -1.85
SSR1-202ENST00000397511 IGLV4-60A0A075B6I1 120 aa3.51□□□□□ -1.85
SSR1-202ENST00000397511 LINC00482Q8N8I6 264 aa3.51□□□□□ -1.85
SSR1-202ENST00000397511 SLPIP03973 132 aa3.51□□□□□ -1.85
SSR1-202ENST00000397511 SS18Q15532 418 aa3.51□□□□□ -1.85
SSR1-202ENST00000397511 CDC42SE2Q9NRR3 84 aa3.51□□□□□ -1.85
SSR1-202ENST00000397511 PMAIP1Q13794 54 aa3.51□□□□□ -1.85
SSR1-202ENST00000397511 SPATA3Q8NHX4 192 aa3.51□□□□□ -1.85
SSR1-202ENST00000397511 MPLKIPQ8TAP9 179 aa3.51□□□□□ -1.85
SSR1-202ENST00000397511 FBN1P35555 2871 aaKnown RBP3.5□□□□□ -1.85
SSR1-202ENST00000397511 IGKV2-28A0A075B6P5 120 aa3.5□□□□□ -1.85
SSR1-202ENST00000397511 IGKV2D-28P01615 120 aa3.5□□□□□ -1.85
SSR1-202ENST00000397511 LAMTOR3Q9UHA4 124 aa3.5□□□□□ -1.85
SSR1-202ENST00000397511 IGLV10-54A0A075B6I4 117 aa3.5□□□□□ -1.85
SSR1-202ENST00000397511 A8MTW9 85 aa3.5□□□□□ -1.85
SSR1-202ENST00000397511 LINC00158P58513 81 aa3.5□□□□□ -1.85
SSR1-202ENST00000397511 FLNBO75369 2602 aaKnown RBP3.5□□□□□ -1.85
SSR1-202ENST00000397511 ANK2Q01484 3957 aa3.5□□□□□ -1.85
SSR1-202ENST00000397511 PLAC8L1A1L4L8 177 aa3.49□□□□□ -1.85
SSR1-202ENST00000397511 TMEM256-PLSCR3K7ERE1 68 aa3.49□□□□□ -1.85
SSR1-202ENST00000397511 Q8N3U1 123 aa3.49□□□□□ -1.85
SSR1-202ENST00000397511 IL17DQ8TAD2 202 aa3.49□□□□□ -1.85
SSR1-202ENST00000397511 MIFP14174 115 aa3.49□□□□□ -1.85
SSR1-202ENST00000397511 FAM19A3Q7Z5A8 133 aa3.49□□□□□ -1.85
SSR1-202ENST00000397511 NSD1Q96L73 2696 aaPredicted RBP3.49□□□□□ -1.85
SSR1-202ENST00000397511 TRAV10A0A0B4J240 114 aa3.49□□□□□ -1.85
SSR1-202ENST00000397511 PRR3P79522 188 aaKnown RBP3.48□□□□□ -1.85
SSR1-202ENST00000397511 PRR15Q8IV56 129 aa3.48□□□□□ -1.85
SSR1-202ENST00000397511 PAX4O43316 350 aa3.48□□□□□ -1.85
SSR1-202ENST00000397511 GYPEP15421 78 aa3.48□□□□□ -1.85
SSR1-202ENST00000397511 HTN3P15516 51 aa3.48□□□□□ -1.85
SSR1-202ENST00000397511 HAMPP81172 84 aa3.48□□□□□ -1.85
SSR1-202ENST00000397511 C16orf74Q96GX8 76 aa3.48□□□□□ -1.85
SSR1-202ENST00000397511 TRBV6-8A0A0A6YYG3 113 aa3.48□□□□□ -1.85
SSR1-202ENST00000397511 TRBV10-1A0A0K0K1A3 114 aa3.48□□□□□ -1.85
SSR1-202ENST00000397511 IBA57-AS1B1ANH7 110 aa3.48□□□□□ -1.85
SSR1-202ENST00000397511 IGLV1-51P01701 117 aa3.48□□□□□ -1.85
SSR1-202ENST00000397511 CCL18P55774 89 aa3.48□□□□□ -1.85
SSR1-202ENST00000397511 LINC01547P58512 204 aaPredicted RBP3.48□□□□□ -1.85
SSR1-202ENST00000397511 ESRGQ1W209 222 aa3.48□□□□□ -1.85
SSR1-202ENST00000397511 DEFB135Q30KP9 77 aa3.48□□□□□ -1.85
SSR1-202ENST00000397511 COX7B2Q8TF08 81 aa3.48□□□□□ -1.85
SSR1-202ENST00000397511 LINC00167Q96N53 147 aa3.48□□□□□ -1.85
SSR1-202ENST00000397511 C19orf73Q9NVV2 129 aa3.48□□□□□ -1.85
SSR1-202ENST00000397511 KRTAP10-3P60369 221 aa3.47□□□□□ -1.85
SSR1-202ENST00000397511 KRTAP1-1Q07627 177 aa3.47□□□□□ -1.85
SSR1-202ENST00000397511 CSNK1G2-AS1Q8NCQ2 148 aa3.47□□□□□ -1.85
SSR1-202ENST00000397511 RNASE1P07998 156 aaKnown RBP3.47□□□□□ -1.85
SSR1-202ENST00000397511 FAM229BQ4G0N7 80 aa3.47□□□□□ -1.85
SSR1-202ENST00000397511 TRBV7-4A0A0J9YYF1 115 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 CXCL6P80162 114 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 Q8N814 137 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 TMEM254Q8TBM7 123 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 STAB1Q9NY15 2570 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 CSMD3Q7Z407 3707 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 NOTCH1P46531 2555 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 LY6G6DO95868 133 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 CD164Q04900 197 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 C9orf116Q5BN46 136 aaPredicted RBP3.46□□□□□ -1.86
SSR1-202ENST00000397511 Q6ZRU5 148 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 TM2D3Q9BRN9 247 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 RETNQ9HD89 108 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 TRBV6-4A0A1B0GX49 114 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 ERC2-IT1O76042 136 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 FUSP35637 526 aaKnown RBP eCLIP3.46□□□□□ -1.86
SSR1-202ENST00000397511 NREPQ16612 68 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 Q6ZQT0 140 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 Q6ZVQ6 151 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 LINC00269Q8N2A0 174 aa3.46□□□□□ -1.86
SSR1-202ENST00000397511 IGHV3OR16-9A0A0B4J2B5 98 aa3.45□□□□□ -1.86
SSR1-202ENST00000397511 LOC110117498A0A087WWA1 95 aa3.45□□□□□ -1.86
SSR1-202ENST00000397511 LINC00959A0A1B0GUT2 108 aa3.45□□□□□ -1.86
SSR1-202ENST00000397511 H3BS24 57 aa3.45□□□□□ -1.86
SSR1-202ENST00000397511 MAST4O15021 2626 aa3.45□□□□□ -1.86
SSR1-202ENST00000397511 INAFM1C9JVW0 142 aa3.44□□□□□ -1.86
SSR1-202ENST00000397511 PRYO14603 147 aa3.44□□□□□ -1.86
SSR1-202ENST00000397511 ANGP03950 147 aaKnown RBP3.44□□□□□ -1.86
SSR1-202ENST00000397511 DAD1P61803 113 aa3.44□□□□□ -1.86
SSR1-202ENST00000397511 J3QL48 77 aa3.44□□□□□ -1.86
SSR1-202ENST00000397511 PDE6GP18545 87 aa3.44□□□□□ -1.86
SSR1-202ENST00000397511 PRR26Q8N8Z3 221 aa3.44□□□□□ -1.86
SSR1-202ENST00000397511 NBEAL1Q6ZS30 2694 aa3.44□□□□□ -1.86
SSR1-202ENST00000397511 TENM3Q9P273 2699 aa3.44□□□□□ -1.86
SSR1-202ENST00000397511 BPY2O14599 106 aa3.43□□□□□ -1.86
SSR1-202ENST00000397511 A0A087WZ39 114 aa3.43□□□□□ -1.86
SSR1-202ENST00000397511 J3QKU1 62 aa3.43□□□□□ -1.86
SSR1-202ENST00000397511 C6orf223Q8N319 242 aa3.43□□□□□ -1.86
SSR1-202ENST00000397511 CELA1Q9UNI1 258 aa3.43□□□□□ -1.86
SSR1-202ENST00000397511 MRPL55Q7Z7F7 128 aaKnown RBP3.42□□□□□ -1.86
SSR1-202ENST00000397511 BAHCC1Q9P281 2608 aa3.42□□□□□ -1.86
SSR1-202ENST00000397511 FAM30AQ9NZY2 134 aa3.42□□□□□ -1.86
SSR1-202ENST00000397511 PRO0255Q9UI72 69 aa3.42□□□□□ -1.86
SSR1-202ENST00000397511 F8P00451 2351 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms