RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 LITAFQ99732 161 aa8.63□□□□□ -1.03
SEC13-209ENST00000397117 LRCOL1A6NCL2 159 aa8.62□□□□□ -1.03
SEC13-209ENST00000397117 C9orf116Q5BN46 136 aaPredicted RBP8.62□□□□□ -1.03
SEC13-209ENST00000397117 ADAMTSL4-AS1Q5T5F5 129 aa8.62□□□□□ -1.03
SEC13-209ENST00000397117 CARD19Q96LW7 228 aa8.62□□□□□ -1.03
SEC13-209ENST00000397117 SPANXDQ9BXN6 97 aa8.62□□□□□ -1.03
SEC13-209ENST00000397117 SPANXCQ9NY87 97 aa8.62□□□□□ -1.03
SEC13-209ENST00000397117 C6orf48Q9UBA6 75 aa8.62□□□□□ -1.03
SEC13-209ENST00000397117 GCSHP23434 173 aa8.62□□□□□ -1.03
SEC13-209ENST00000397117 FUSP35637 526 aaKnown RBP eCLIP8.62□□□□□ -1.03
SEC13-209ENST00000397117 DAND5Q8N907 189 aa8.62□□□□□ -1.03
SEC13-209ENST00000397117 SRRM2Q9UQ35 2752 aaKnown RBP8.61□□□□□ -1.03
SEC13-209ENST00000397117 MYCBP2O75592 4640 aa8.61□□□□□ -1.03
SEC13-209ENST00000397117 Q5VSD8 79 aa8.61□□□□□ -1.03
SEC13-209ENST00000397117 GTF2H5Q6ZYL4 71 aa8.61□□□□□ -1.03
SEC13-209ENST00000397117 COPS9Q8WXC6 57 aa8.61□□□□□ -1.03
SEC13-209ENST00000397117 A0A087WTM6 91 aa8.6□□□□□ -1.03
SEC13-209ENST00000397117 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.6□□□□□ -1.03
SEC13-209ENST00000397117 MIR7-3HGQ8N6C7 128 aa8.6□□□□□ -1.03
SEC13-209ENST00000397117 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.59□□□□□ -1.03
SEC13-209ENST00000397117 A0A1B0GWB2 263 aa8.59□□□□□ -1.03
SEC13-209ENST00000397117 K7EP34 96 aa8.59□□□□□ -1.03
SEC13-209ENST00000397117 SLPIP03973 132 aa8.59□□□□□ -1.03
SEC13-209ENST00000397117 IFITM1P13164 125 aa8.59□□□□□ -1.03
SEC13-209ENST00000397117 KRTAP10-1P60331 282 aa8.59□□□□□ -1.03
SEC13-209ENST00000397117 NPC2P61916 151 aa8.59□□□□□ -1.03
SEC13-209ENST00000397117 A0A1W2PPM0 123 aa8.58□□□□□ -1.04
SEC13-209ENST00000397117 H3BUT2 72 aa8.58□□□□□ -1.04
SEC13-209ENST00000397117 CNBPP62633 177 aaKnown RBP8.58□□□□□ -1.04
SEC13-209ENST00000397117 RNF151Q2KHN1 245 aa8.58□□□□□ -1.04
SEC13-209ENST00000397117 MUSTN1Q8IVN3 82 aa8.58□□□□□ -1.04
SEC13-209ENST00000397117 Q8N814 137 aa8.58□□□□□ -1.04
SEC13-209ENST00000397117 TMEM238LA0A1B0GVL6 79 aa8.58□□□□□ -1.04
SEC13-209ENST00000397117 GAGE10A6NGK3 116 aa8.58□□□□□ -1.04
SEC13-209ENST00000397117 A6NJY4 79 aa8.58□□□□□ -1.04
SEC13-209ENST00000397117 RPL24P83731 157 aaKnown RBP8.58□□□□□ -1.04
SEC13-209ENST00000397117 LINC00308Q8TCZ7 52 aa8.58□□□□□ -1.04
SEC13-209ENST00000397117 NDUFC2-KCTD14E9PQ53 114 aa8.56□□□□□ -1.04
SEC13-209ENST00000397117 RAB37Q96AX2 223 aa8.55□□□□□ -1.04
SEC13-209ENST00000397117 SND1-IT1Q9HBX3 110 aa8.55□□□□□ -1.04
SEC13-209ENST00000397117 NHP2Q9NX24 153 aaKnown RBP8.55□□□□□ -1.04
SEC13-209ENST00000397117 SMR3BP02814 79 aaPredicted RBP8.54□□□□□ -1.04
SEC13-209ENST00000397117 FABP2P12104 132 aa8.54□□□□□ -1.04
SEC13-209ENST00000397117 RPL18AQ02543 176 aaKnown RBP8.54□□□□□ -1.04
SEC13-209ENST00000397117 LOC107984640A0A0U1RRK4 108 aa8.54□□□□□ -1.04
SEC13-209ENST00000397117 K7ERJ3 54 aa8.54□□□□□ -1.04
SEC13-209ENST00000397117 TLX1NBP0CAT3 122 aa8.54□□□□□ -1.04
SEC13-209ENST00000397117 GAGE2EQ4V326 116 aa8.54□□□□□ -1.04
SEC13-209ENST00000397117 GAGE2DQ9UEU5 116 aa8.54□□□□□ -1.04
SEC13-209ENST00000397117 SPCS1Q9Y6A9 102 aa8.54□□□□□ -1.04
SEC13-209ENST00000397117 A4D1N5 150 aa8.53□□□□□ -1.04
SEC13-209ENST00000397117 SOSTDC1Q6X4U4 206 aa8.53□□□□□ -1.04
SEC13-209ENST00000397117 NAA38Q9BRA0 125 aaKnown RBP8.53□□□□□ -1.04
SEC13-209ENST00000397117 PPDPFQ9H3Y8 114 aa8.53□□□□□ -1.04
SEC13-209ENST00000397117 EIF4EBP3O60516 100 aaPredicted RBP8.52□□□□□ -1.05
SEC13-209ENST00000397117 Q6ZRP5 223 aa8.52□□□□□ -1.05
SEC13-209ENST00000397117 PKIGQ9Y2B9 76 aa8.52□□□□□ -1.05
SEC13-209ENST00000397117 XAGE1AQ9HD64 81 aa8.51□□□□□ -1.05
SEC13-209ENST00000397117 LOC107984156A0A0G2JMH3 177 aa8.51□□□□□ -1.05
SEC13-209ENST00000397117 FAM229AH3BQW9 127 aa8.51□□□□□ -1.05
SEC13-209ENST00000397117 CFC1BP0CG36 223 aa8.51□□□□□ -1.05
SEC13-209ENST00000397117 CFC1P0CG37 223 aa8.51□□□□□ -1.05
SEC13-209ENST00000397117 GAGE2BQ13066 116 aa8.51□□□□□ -1.05
SEC13-209ENST00000397117 OCIAD2Q56VL3 154 aa8.51□□□□□ -1.05
SEC13-209ENST00000397117 ARL17AQ8IVW1 177 aa8.51□□□□□ -1.05
SEC13-209ENST00000397117 C9orf163Q8N9P6 203 aa8.51□□□□□ -1.05
SEC13-209ENST00000397117 CBY1Q9Y3M2 126 aa8.5□□□□□ -1.05
SEC13-209ENST00000397117 DNAH8Q96JB1 4490 aa8.49□□□□□ -1.05
SEC13-209ENST00000397117 IGLV5-52A0A0A0MRZ9 124 aa8.49□□□□□ -1.05
SEC13-209ENST00000397117 A0A0B4J2C4 111 aa8.48□□□□□ -1.05
SEC13-209ENST00000397117 LYRM7Q5U5X0 104 aa8.48□□□□□ -1.05
SEC13-209ENST00000397117 HAMPP81172 84 aa8.47□□□□□ -1.05
SEC13-209ENST00000397117 J3QL48 77 aa8.47□□□□□ -1.05
SEC13-209ENST00000397117 NDUFC2O95298 119 aa8.47□□□□□ -1.05
SEC13-209ENST00000397117 LINC01620Q4KN68 170 aa8.47□□□□□ -1.05
SEC13-209ENST00000397117 C9orf129Q5T035 196 aaKnown RBP8.47□□□□□ -1.05
SEC13-209ENST00000397117 IGKV2-24A0A0C4DH68 120 aa8.46□□□□□ -1.06
SEC13-209ENST00000397117 K7ERU9 68 aa8.46□□□□□ -1.06
SEC13-209ENST00000397117 A0A096LNI7 61 aa8.45□□□□□ -1.06
SEC13-209ENST00000397117 SDIM1Q6ZPB5 146 aa8.45□□□□□ -1.06
SEC13-209ENST00000397117 PRO1854Q9UHT4 67 aa8.45□□□□□ -1.06
SEC13-209ENST00000397117 TRAV13-2A0A0B4J235 113 aa8.44□□□□□ -1.06
SEC13-209ENST00000397117 PRR3P79522 188 aaKnown RBP8.44□□□□□ -1.06
SEC13-209ENST00000397117 LINC00474Q9P2X8 69 aa8.44□□□□□ -1.06
SEC13-209ENST00000397117 IGKV2-28A0A075B6P5 120 aa8.43□□□□□ -1.06
SEC13-209ENST00000397117 F8W1H4 67 aa8.43□□□□□ -1.06
SEC13-209ENST00000397117 NCR3O14931 201 aa8.43□□□□□ -1.06
SEC13-209ENST00000397117 IGKV2D-28P01615 120 aa8.43□□□□□ -1.06
SEC13-209ENST00000397117 KRTAP29-1A8MX34 341 aaPredicted RBP8.43□□□□□ -1.06
SEC13-209ENST00000397117 TSPAN13O95857 204 aa8.43□□□□□ -1.06
SEC13-209ENST00000397117 NKAPP1Q8N9T2 125 aa8.43□□□□□ -1.06
SEC13-209ENST00000397117 Q8NDZ9 215 aa8.43□□□□□ -1.06
SEC13-209ENST00000397117 OR13C6PQ8NH95 151 aa8.43□□□□□ -1.06
SEC13-209ENST00000397117 FAM30AQ9NZY2 134 aa8.43□□□□□ -1.06
SEC13-209ENST00000397117 H7C2G1 150 aa8.42□□□□□ -1.06
SEC13-209ENST00000397117 VPREB1P12018 145 aa8.42□□□□□ -1.06
SEC13-209ENST00000397117 RPL13AP40429 203 aaKnown RBP8.42□□□□□ -1.06
SEC13-209ENST00000397117 DPH3Q96FX2 82 aa8.42□□□□□ -1.06
SEC13-209ENST00000397117 PLA2G2DQ9UNK4 145 aa8.42□□□□□ -1.06
SEC13-209ENST00000397117 TRBV10-2A0A0K0K1G8 114 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms