RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 UNQ6190/PRO20217Q6UXQ8 127 aa12.43□□□□□ -0.42
HERPUD2-202ENST00000396081 COX17Q14061 63 aa12.43□□□□□ -0.42
HERPUD2-202ENST00000396081 C10orf25Q5T742 122 aa12.43□□□□□ -0.42
HERPUD2-202ENST00000396081 ITPR3Q14573 2671 aa12.43□□□□□ -0.42
HERPUD2-202ENST00000396081 FLNAP21333 2647 aaKnown RBP12.42□□□□□ -0.42
HERPUD2-202ENST00000396081 REG3AQ06141 175 aa12.41□□□□□ -0.42
HERPUD2-202ENST00000396081 DEFB4AO15263 64 aa12.41□□□□□ -0.42
HERPUD2-202ENST00000396081 PRO0255Q9UI72 69 aa12.41□□□□□ -0.42
HERPUD2-202ENST00000396081 F8WEM9 126 aa12.4□□□□□ -0.42
HERPUD2-202ENST00000396081 WFDC11Q8NEX6 87 aa12.4□□□□□ -0.42
HERPUD2-202ENST00000396081 SERP1Q9Y6X1 66 aa12.4□□□□□ -0.42
HERPUD2-202ENST00000396081 IGLV1-51P01701 117 aa12.39□□□□□ -0.43
HERPUD2-202ENST00000396081 SPAG11BQ08648 103 aa12.39□□□□□ -0.43
HERPUD2-202ENST00000396081 LINC00482Q8N8I6 264 aa12.38□□□□□ -0.43
HERPUD2-202ENST00000396081 LOC110117498A0A087WWA1 95 aa12.38□□□□□ -0.43
HERPUD2-202ENST00000396081 XAGE1AQ9HD64 81 aa12.37□□□□□ -0.43
HERPUD2-202ENST00000396081 PRB1P04280 392 aa12.36□□□□□ -0.43
HERPUD2-202ENST00000396081 DEFB113Q30KQ7 82 aa12.36□□□□□ -0.43
HERPUD2-202ENST00000396081 TM2D3Q9BRN9 247 aa12.35□□□□□ -0.43
HERPUD2-202ENST00000396081 IGHV4-28A0A0C4DH34 117 aa12.34□□□□□ -0.43
HERPUD2-202ENST00000396081 CYSRT1A8MQ03 144 aa12.34□□□□□ -0.43
HERPUD2-202ENST00000396081 MUC7Q8TAX7 377 aa12.34□□□□□ -0.43
HERPUD2-202ENST00000396081 LINC00336Q6ZUF6 198 aa12.34□□□□□ -0.43
HERPUD2-202ENST00000396081 KLKP1Q107X0 134 aa12.33□□□□□ -0.44
HERPUD2-202ENST00000396081 HTN3P15516 51 aa12.32□□□□□ -0.44
HERPUD2-202ENST00000396081 ZNF469Q96JG9 3925 aaPredicted RBP12.32□□□□□ -0.44
HERPUD2-202ENST00000396081 DIRC1Q969H9 104 aa12.31□□□□□ -0.44
HERPUD2-202ENST00000396081 BCE1O60756 84 aa12.3□□□□□ -0.44
HERPUD2-202ENST00000396081 IGLV6-57P01721 117 aa12.3□□□□□ -0.44
HERPUD2-202ENST00000396081 PDE6GP18545 87 aa12.3□□□□□ -0.44
HERPUD2-202ENST00000396081 CXCL6P80162 114 aa12.3□□□□□ -0.44
HERPUD2-202ENST00000396081 Q8N9L7 120 aa12.29□□□□□ -0.44
HERPUD2-202ENST00000396081 MRAPQ8TCY5 172 aa12.29□□□□□ -0.44
HERPUD2-202ENST00000396081 KLK12Q9UKR0 248 aa12.29□□□□□ -0.44
HERPUD2-202ENST00000396081 LINC00474Q9P2X8 69 aa12.28□□□□□ -0.44
HERPUD2-202ENST00000396081 X6R8D5 127 aa12.28□□□□□ -0.44
HERPUD2-202ENST00000396081 LINC00612Q8N6U2 182 aa12.27□□□□□ -0.45
HERPUD2-202ENST00000396081 SMIM26A0A096LP01 95 aa12.26□□□□□ -0.45
HERPUD2-202ENST00000396081 COX7BP24311 80 aa12.26□□□□□ -0.45
HERPUD2-202ENST00000396081 ZNF73O43830 326 aaPredicted RBP12.26□□□□□ -0.45
HERPUD2-202ENST00000396081 MIFP14174 115 aa12.26□□□□□ -0.45
HERPUD2-202ENST00000396081 NREPQ16612 68 aa12.26□□□□□ -0.45
HERPUD2-202ENST00000396081 C1orf43Q9BWL3 253 aa12.26□□□□□ -0.45
HERPUD2-202ENST00000396081 DEFB135Q30KP9 77 aa12.25□□□□□ -0.45
HERPUD2-202ENST00000396081 C9orf66Q5T8R8 295 aa12.25□□□□□ -0.45
HERPUD2-202ENST00000396081 FP248Q71RG6 208 aaPredicted RBP12.25□□□□□ -0.45
HERPUD2-202ENST00000396081 TRBV7-6A0A0J9YX20 115 aa12.24□□□□□ -0.45
HERPUD2-202ENST00000396081 EPM2AB3EWF7 344 aa12.24□□□□□ -0.45
HERPUD2-202ENST00000396081 BPY2O14599 106 aa12.24□□□□□ -0.45
HERPUD2-202ENST00000396081 DAD1P61803 113 aa12.24□□□□□ -0.45
HERPUD2-202ENST00000396081 PRO0628Q9UI54 55 aa12.23□□□□□ -0.45
HERPUD2-202ENST00000396081 PKIGQ9Y2B9 76 aa12.22□□□□□ -0.45
HERPUD2-202ENST00000396081 TRBV7-4A0A0J9YYF1 115 aa12.22□□□□□ -0.45
HERPUD2-202ENST00000396081 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.22□□□□□ -0.45
HERPUD2-202ENST00000396081 A0A0J9YWU9 116 aa12.22□□□□□ -0.45
HERPUD2-202ENST00000396081 IGHV4-30-4P0DP06 118 aa12.22□□□□□ -0.45
HERPUD2-202ENST00000396081 TMEM254Q8TBM7 123 aa12.21□□□□□ -0.45
HERPUD2-202ENST00000396081 C6orf48Q9UBA6 75 aa12.21□□□□□ -0.45
HERPUD2-202ENST00000396081 HIGD2BQ4VC39 106 aa12.21□□□□□ -0.46
HERPUD2-202ENST00000396081 MPLKIPQ8TAP9 179 aa12.19□□□□□ -0.46
HERPUD2-202ENST00000396081 H3BQ85 93 aa12.19□□□□□ -0.46
HERPUD2-202ENST00000396081 NDUFC1O43677 76 aa12.19□□□□□ -0.46
HERPUD2-202ENST00000396081 KRTAP1-3Q8IUG1 177 aa12.18□□□□□ -0.46
HERPUD2-202ENST00000396081 LYRM9A8MSI8 78 aa12.17□□□□□ -0.46
HERPUD2-202ENST00000396081 C3orf84H3BNL1 204 aa12.17□□□□□ -0.46
HERPUD2-202ENST00000396081 C16orf95Q9H693 158 aa12.17□□□□□ -0.46
HERPUD2-202ENST00000396081 BRK1Q8WUW1 75 aa12.16□□□□□ -0.46
HERPUD2-202ENST00000396081 CELA1Q9UNI1 258 aa12.16□□□□□ -0.46
HERPUD2-202ENST00000396081 ELOF1P60002 83 aaKnown RBP12.15□□□□□ -0.46
HERPUD2-202ENST00000396081 DEFB105AQ8NG35 78 aa12.15□□□□□ -0.46
HERPUD2-202ENST00000396081 CAMK2N2Q96S95 79 aa12.15□□□□□ -0.46
HERPUD2-202ENST00000396081 UNC79Q9P2D8 2635 aa12.13□□□□□ -0.47
HERPUD2-202ENST00000396081 VWFP04275 2813 aa12.13□□□□□ -0.47
HERPUD2-202ENST00000396081 LELP1Q5T871 98 aa12.12□□□□□ -0.47
HERPUD2-202ENST00000396081 A0A0U1RQV1 116 aa12.12□□□□□ -0.47
HERPUD2-202ENST00000396081 FAM229BQ4G0N7 80 aa12.11□□□□□ -0.47
HERPUD2-202ENST00000396081 USP24Q9UPU5 2620 aa12.1□□□□□ -0.47
HERPUD2-202ENST00000396081 IGKV4-1P06312 121 aa12.1□□□□□ -0.47
HERPUD2-202ENST00000396081 VPREB1P12018 145 aa12.09□□□□□ -0.47
HERPUD2-202ENST00000396081 ATP5EP56381 51 aaPredicted RBP12.09□□□□□ -0.47
HERPUD2-202ENST00000396081 PRYO14603 147 aa12.09□□□□□ -0.47
HERPUD2-202ENST00000396081 HIGD2AQ9BW72 106 aa12.09□□□□□ -0.47
HERPUD2-202ENST00000396081 GVQW2A0A096LPI5 108 aaPredicted RBP12.08□□□□□ -0.48
HERPUD2-202ENST00000396081 FUSP35637 526 aaKnown RBP eCLIP12.08□□□□□ -0.48
HERPUD2-202ENST00000396081 PRR34Q9NV39 138 aa12.08□□□□□ -0.48
HERPUD2-202ENST00000396081 NOTCH2Q04721 2471 aa12.08□□□□□ -0.48
HERPUD2-202ENST00000396081 M0R378 163 aa12.07□□□□□ -0.48
HERPUD2-202ENST00000396081 Q6ZRU5 148 aa12.06□□□□□ -0.48
HERPUD2-202ENST00000396081 LINC00528Q8N1L1 170 aa12.06□□□□□ -0.48
HERPUD2-202ENST00000396081 UBR5O95071 2799 aaPredicted RBP12.05□□□□□ -0.48
HERPUD2-202ENST00000396081 F8P00451 2351 aa12.05□□□□□ -0.48
HERPUD2-202ENST00000396081 FAM30AQ9NZY2 134 aa12.05□□□□□ -0.48
HERPUD2-202ENST00000396081 OCR1Q9BZK8 76 aa12.04□□□□□ -0.48
HERPUD2-202ENST00000396081 SPART-AS1P0CW21 52 aa12.04□□□□□ -0.48
HERPUD2-202ENST00000396081 KRTAP10-3P60369 221 aa12.04□□□□□ -0.48
HERPUD2-202ENST00000396081 LRCOL1A6NCL2 159 aa12.02□□□□□ -0.49
HERPUD2-202ENST00000396081 ERC2-IT1O76042 136 aa12.01□□□□□ -0.49
HERPUD2-202ENST00000396081 APOC4P55056 127 aa12.01□□□□□ -0.49
HERPUD2-202ENST00000396081 WFDC10BQ8IUB3 73 aa12.01□□□□□ -0.49
HERPUD2-202ENST00000396081 EGFEM1PQ0D2K5 195 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms