RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 IGKV2-28A0A075B6P5 120 aa6.92□□□□□ -1.3
HLA-DQA1-203ENST00000395363 IGLV5-39A0A0G2JS06 123 aa6.92□□□□□ -1.3
HLA-DQA1-203ENST00000395363 IGKV2D-28P01615 120 aa6.92□□□□□ -1.3
HLA-DQA1-203ENST00000395363 A0A087X002 238 aa6.91□□□□□ -1.3
HLA-DQA1-203ENST00000395363 H3BRM9 83 aa6.91□□□□□ -1.3
HLA-DQA1-203ENST00000395363 ZNF861PO60384 105 aa6.91□□□□□ -1.3
HLA-DQA1-203ENST00000395363 BAGE3Q86Y29 109 aa6.91□□□□□ -1.3
HLA-DQA1-203ENST00000395363 A0A0U1RRA0 63 aa6.9□□□□□ -1.3
HLA-DQA1-203ENST00000395363 ATP5LO75964 103 aa6.9□□□□□ -1.3
HLA-DQA1-203ENST00000395363 TMEM170BQ5T4T1 132 aa6.9□□□□□ -1.3
HLA-DQA1-203ENST00000395363 TMEM238C9JI98 176 aa6.89□□□□□ -1.31
HLA-DQA1-203ENST00000395363 BCE1O60756 84 aa6.89□□□□□ -1.31
HLA-DQA1-203ENST00000395363 LBHQ53QV2 105 aaPredicted RBP6.89□□□□□ -1.31
HLA-DQA1-203ENST00000395363 FAM19A2Q8N3H0 131 aa6.89□□□□□ -1.31
HLA-DQA1-203ENST00000395363 NKAPP1Q8N9T2 125 aa6.89□□□□□ -1.31
HLA-DQA1-203ENST00000395363 SND1-IT1Q9HBX3 110 aa6.89□□□□□ -1.31
HLA-DQA1-203ENST00000395363 TP73-AS1Q9UF72 201 aa6.89□□□□□ -1.31
HLA-DQA1-203ENST00000395363 ERG28Q9UKR5 140 aa6.89□□□□□ -1.31
HLA-DQA1-203ENST00000395363 IGLV1-50A0A075B6I6 118 aa6.88□□□□□ -1.31
HLA-DQA1-203ENST00000395363 NUPR1O60356 82 aa6.88□□□□□ -1.31
HLA-DQA1-203ENST00000395363 VPREB1P12018 145 aa6.88□□□□□ -1.31
HLA-DQA1-203ENST00000395363 PRLHP81277 87 aa6.88□□□□□ -1.31
HLA-DQA1-203ENST00000395363 CHTOPQ9Y3Y2 248 aaKnown RBP6.88□□□□□ -1.31
HLA-DQA1-203ENST00000395363 IGLV5-37A0A075B6J1 123 aa6.87□□□□□ -1.31
HLA-DQA1-203ENST00000395363 H0Y8G0 127 aa6.87□□□□□ -1.31
HLA-DQA1-203ENST00000395363 TSPAN13O95857 204 aa6.87□□□□□ -1.31
HLA-DQA1-203ENST00000395363 LINC00310P59036 64 aa6.86□□□□□ -1.31
HLA-DQA1-203ENST00000395363 KRTAP13-1Q8IUC0 172 aa6.86□□□□□ -1.31
HLA-DQA1-203ENST00000395363 TMEM223A0PJW6 202 aa6.85□□□□□ -1.31
HLA-DQA1-203ENST00000395363 KRTAP13-2Q52LG2 175 aa6.85□□□□□ -1.31
HLA-DQA1-203ENST00000395363 IFI27L1Q96BM0 104 aa6.85□□□□□ -1.31
HLA-DQA1-203ENST00000395363 TRGC2P03986 189 aa6.84□□□□□ -1.31
HLA-DQA1-203ENST00000395363 RPL28P46779 137 aaKnown RBP6.84□□□□□ -1.31
HLA-DQA1-203ENST00000395363 UBE2AP49459 152 aa6.84□□□□□ -1.31
HLA-DQA1-203ENST00000395363 SVIPQ8NHG7 77 aa6.84□□□□□ -1.31
HLA-DQA1-203ENST00000395363 TSPEAR-AS2P59090 65 aa6.83□□□□□ -1.32
HLA-DQA1-203ENST00000395363 PRR4Q16378 134 aa6.83□□□□□ -1.32
HLA-DQA1-203ENST00000395363 SERF1AO75920 110 aa6.82□□□□□ -1.32
HLA-DQA1-203ENST00000395363 SMIM13P0DJ93 91 aa6.82□□□□□ -1.32
HLA-DQA1-203ENST00000395363 LINC00158P58513 81 aa6.82□□□□□ -1.32
HLA-DQA1-203ENST00000395363 FAM19A1Q7Z5A9 133 aa6.82□□□□□ -1.32
HLA-DQA1-203ENST00000395363 CHCHD1Q96BP2 118 aaKnown RBP6.82□□□□□ -1.32
HLA-DQA1-203ENST00000395363 PMCHL2Q9BQD1 86 aa6.82□□□□□ -1.32
HLA-DQA1-203ENST00000395363 TMEM126AQ9H061 195 aa6.82□□□□□ -1.32
HLA-DQA1-203ENST00000395363 COLCA2A8K830 154 aa6.81□□□□□ -1.32
HLA-DQA1-203ENST00000395363 M0R378 163 aa6.81□□□□□ -1.32
HLA-DQA1-203ENST00000395363 NCR3O14931 201 aa6.81□□□□□ -1.32
HLA-DQA1-203ENST00000395363 RPL13AP40429 203 aaKnown RBP6.81□□□□□ -1.32
HLA-DQA1-203ENST00000395363 RETNLBQ9BQ08 111 aa6.81□□□□□ -1.32
HLA-DQA1-203ENST00000395363 TRAV12-1A0A0B4J245 112 aa6.8□□□□□ -1.32
HLA-DQA1-203ENST00000395363 LOC105371267A0A1B0GV96 52 aa6.8□□□□□ -1.32
HLA-DQA1-203ENST00000395363 HSBP1O75506 76 aa6.8□□□□□ -1.32
HLA-DQA1-203ENST00000395363 DAND5Q8N907 189 aa6.8□□□□□ -1.32
HLA-DQA1-203ENST00000395363 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
HLA-DQA1-203ENST00000395363 CRYGAP11844 174 aa6.79□□□□□ -1.32
HLA-DQA1-203ENST00000395363 FABP4P15090 132 aa6.79□□□□□ -1.32
HLA-DQA1-203ENST00000395363 MUC2Q02817 5179 aa6.78□□□□□ -1.32
HLA-DQA1-203ENST00000395363 COX17Q14061 63 aa6.78□□□□□ -1.32
HLA-DQA1-203ENST00000395363 MEIG1Q5JSS6 88 aa6.78□□□□□ -1.32
HLA-DQA1-203ENST00000395363 C3orf22Q8N5N4 141 aa6.78□□□□□ -1.32
HLA-DQA1-203ENST00000395363 MIR7-3HGQ8N6C7 128 aa6.78□□□□□ -1.32
HLA-DQA1-203ENST00000395363 HIGD2AQ9BW72 106 aa6.78□□□□□ -1.32
HLA-DQA1-203ENST00000395363 BOD1L2Q8IYS8 172 aa6.77□□□□□ -1.33
HLA-DQA1-203ENST00000395363 NDUFA12Q9UI09 145 aa6.77□□□□□ -1.33
HLA-DQA1-203ENST00000395363 RPL24P83731 157 aaKnown RBP6.76□□□□□ -1.33
HLA-DQA1-203ENST00000395363 LEPROTL1O95214 131 aa6.75□□□□□ -1.33
HLA-DQA1-203ENST00000395363 PLEKHB2Q96CS7 222 aa6.75□□□□□ -1.33
HLA-DQA1-203ENST00000395363 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
HLA-DQA1-203ENST00000395363 TRBV10-3A0A0K0K1G6 114 aa6.73□□□□□ -1.33
HLA-DQA1-203ENST00000395363 NPC2P61916 151 aa6.73□□□□□ -1.33
HLA-DQA1-203ENST00000395363 LINC00304Q8N9R0 145 aa6.73□□□□□ -1.33
HLA-DQA1-203ENST00000395363 LEPROTO15243 131 aa6.72□□□□□ -1.33
HLA-DQA1-203ENST00000395363 SFTA2Q6UW10 78 aa6.72□□□□□ -1.33
HLA-DQA1-203ENST00000395363 PPDPFQ9H3Y8 114 aa6.72□□□□□ -1.33
HLA-DQA1-203ENST00000395363 IGKV2D-26A0A0A0MRZ7 120 aa6.71□□□□□ -1.34
HLA-DQA1-203ENST00000395363 J3QQQ9 107 aa6.71□□□□□ -1.34
HLA-DQA1-203ENST00000395363 FAM229BQ4G0N7 80 aa6.71□□□□□ -1.34
HLA-DQA1-203ENST00000395363 LCE1DQ5T752 114 aa6.71□□□□□ -1.34
HLA-DQA1-203ENST00000395363 SPRR4Q96PI1 79 aa6.71□□□□□ -1.34
HLA-DQA1-203ENST00000395363 MYMXA0A1B0GTQ4 84 aa6.7□□□□□ -1.34
HLA-DQA1-203ENST00000395363 PRYO14603 147 aa6.7□□□□□ -1.34
HLA-DQA1-203ENST00000395363 DPM2O94777 84 aa6.7□□□□□ -1.34
HLA-DQA1-203ENST00000395363 KRTAP4-16G5E9R7 235 aaPredicted RBP6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 HIST1H2BKO60814 126 aa6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 ERC2-IT1O76042 136 aa6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 IGKCP01834 107 aa6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 HIST1H2BJP06899 126 aa6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 HIST1H2BOP23527 126 aa6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 HIST1H2BBP33778 126 aa6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 HIST1H2BDP58876 126 aa6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 HIST1H2BCP62807 126 aa6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 HERV-K104P63124 156 aa6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 HIST2H2BEQ16778 126 aa6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 SOSTDC1Q6X4U4 206 aa6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 SMCR5Q8TEV8 140 aa6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 HIST1H2BHQ93079 126 aa6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 HIST1H2BNQ99877 126 aa6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 HIST1H2BMQ99879 126 aa6.69□□□□□ -1.34
HLA-DQA1-203ENST00000395363 HSPB8Q9UJY1 196 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms