RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 KRTAP10-9P60411 292 aa4.34□□□□□ -1.71
NXF3-201ENST00000395065 IGHV4-28A0A0C4DH34 117 aa4.34□□□□□ -1.71
NXF3-201ENST00000395065 IGKV3OR2-268A0A0C4DH90 116 aa4.34□□□□□ -1.71
NXF3-201ENST00000395065 TRBV7-6A0A0J9YX20 115 aa4.34□□□□□ -1.71
NXF3-201ENST00000395065 FSHBP01225 129 aa4.34□□□□□ -1.71
NXF3-201ENST00000395065 IGHV4-31P0DP07 118 aa4.34□□□□□ -1.71
NXF3-201ENST00000395065 PRR3P79522 188 aaKnown RBP4.34□□□□□ -1.71
NXF3-201ENST00000395065 STHQ8IWL8 128 aa4.34□□□□□ -1.71
NXF3-201ENST00000395065 SNURFQ9Y675 71 aa4.34□□□□□ -1.71
NXF3-201ENST00000395065 H3BQ85 93 aa4.33□□□□□ -1.72
NXF3-201ENST00000395065 ERC2-IT1O76042 136 aa4.33□□□□□ -1.72
NXF3-201ENST00000395065 RPL35AP18077 110 aaKnown RBP4.33□□□□□ -1.72
NXF3-201ENST00000395065 KIAA0087Q14695 138 aa4.33□□□□□ -1.72
NXF3-201ENST00000395065 C6orf99Q4VX62 202 aa4.33□□□□□ -1.72
NXF3-201ENST00000395065 Q6YL49 198 aa4.33□□□□□ -1.72
NXF3-201ENST00000395065 C1orf43Q9BWL3 253 aa4.33□□□□□ -1.72
NXF3-201ENST00000395065 NOP10Q9NPE3 64 aaKnown RBP4.33□□□□□ -1.72
NXF3-201ENST00000395065 A0A1B0GUV1 79 aa4.33□□□□□ -1.72
NXF3-201ENST00000395065 HAMPP81172 84 aa4.33□□□□□ -1.72
NXF3-201ENST00000395065 Q8N3U1 123 aa4.33□□□□□ -1.72
NXF3-201ENST00000395065 DYNLRB2Q8TF09 96 aa4.33□□□□□ -1.72
NXF3-201ENST00000395065 C4orf3Q8WVX3 66 aa4.33□□□□□ -1.72
NXF3-201ENST00000395065 LINC00474Q9P2X8 69 aa4.33□□□□□ -1.72
NXF3-201ENST00000395065 GIG44P09565 113 aaPredicted RBP4.32□□□□□ -1.72
NXF3-201ENST00000395065 MIFP14174 115 aa4.32□□□□□ -1.72
NXF3-201ENST00000395065 C16orf74Q96GX8 76 aa4.32□□□□□ -1.72
NXF3-201ENST00000395065 TM2D3Q9BRN9 247 aa4.32□□□□□ -1.72
NXF3-201ENST00000395065 C11orf68Q9H3H3 251 aaKnown RBP4.32□□□□□ -1.72
NXF3-201ENST00000395065 LCE2BO14633 110 aa4.31□□□□□ -1.72
NXF3-201ENST00000395065 Q8NDZ9 215 aa4.31□□□□□ -1.72
NXF3-201ENST00000395065 MUC7Q8TAX7 377 aa4.31□□□□□ -1.72
NXF3-201ENST00000395065 TLN2Q9Y4G6 2542 aa4.31□□□□□ -1.72
NXF3-201ENST00000395065 TRGV2A0A075B6R0 118 aa4.31□□□□□ -1.72
NXF3-201ENST00000395065 TRGV4A0A0C4DH28 118 aa4.31□□□□□ -1.72
NXF3-201ENST00000395065 DEFB113Q30KQ7 82 aa4.31□□□□□ -1.72
NXF3-201ENST00000395065 WFDC11Q8NEX6 87 aa4.31□□□□□ -1.72
NXF3-201ENST00000395065 LAMTOR3Q9UHA4 124 aa4.31□□□□□ -1.72
NXF3-201ENST00000395065 H3BS24 57 aa4.3□□□□□ -1.72
NXF3-201ENST00000395065 RNASE1P07998 156 aaKnown RBP4.3□□□□□ -1.72
NXF3-201ENST00000395065 SPATA3Q8NHX4 192 aa4.3□□□□□ -1.72
NXF3-201ENST00000395065 TMEM254Q8TBM7 123 aa4.3□□□□□ -1.72
NXF3-201ENST00000395065 PKIGQ9Y2B9 76 aa4.3□□□□□ -1.72
NXF3-201ENST00000395065 ACANP16112 2415 aa4.29□□□□□ -1.72
NXF3-201ENST00000395065 IGLV6-57P01721 117 aa4.29□□□□□ -1.72
NXF3-201ENST00000395065 NREPQ16612 68 aa4.29□□□□□ -1.72
NXF3-201ENST00000395065 CSNK1G2-AS1Q8NCQ2 148 aa4.29□□□□□ -1.72
NXF3-201ENST00000395065 WNK1Q9H4A3 2382 aa4.29□□□□□ -1.72
NXF3-201ENST00000395065 NOTCH3Q9UM47 2321 aa4.29□□□□□ -1.72
NXF3-201ENST00000395065 CD164L2Q6UWJ8 174 aa4.29□□□□□ -1.72
NXF3-201ENST00000395065 KRTAP1-3Q8IUG1 177 aa4.29□□□□□ -1.72
NXF3-201ENST00000395065 SONP18583 2426 aaKnown RBP4.28□□□□□ -1.72
NXF3-201ENST00000395065 FLNAP21333 2647 aaKnown RBP4.28□□□□□ -1.72
NXF3-201ENST00000395065 A0A0U1RQV1 116 aa4.28□□□□□ -1.72
NXF3-201ENST00000395065 FAM229BQ4G0N7 80 aa4.28□□□□□ -1.72
NXF3-201ENST00000395065 Q6ZQY7 126 aa4.28□□□□□ -1.72
NXF3-201ENST00000395065 Q6ZTC4 211 aa4.28□□□□□ -1.72
NXF3-201ENST00000395065 OCR1Q9BZK8 76 aa4.28□□□□□ -1.72
NXF3-201ENST00000395065 BPY2O14599 106 aa4.27□□□□□ -1.73
NXF3-201ENST00000395065 CMC4P56277 68 aaPredicted RBP4.27□□□□□ -1.73
NXF3-201ENST00000395065 C1orf195Q5TG92 126 aa4.27□□□□□ -1.73
NXF3-201ENST00000395065 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.27□□□□□ -1.73
NXF3-201ENST00000395065 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
NXF3-201ENST00000395065 A0A0J9YWU9 116 aa4.27□□□□□ -1.73
NXF3-201ENST00000395065 CCL24O00175 119 aa4.27□□□□□ -1.73
NXF3-201ENST00000395065 IGHV4-30-4P0DP06 118 aa4.27□□□□□ -1.73
NXF3-201ENST00000395065 C9orf116Q5BN46 136 aaPredicted RBP4.27□□□□□ -1.73
NXF3-201ENST00000395065 LINC00612Q8N6U2 182 aa4.27□□□□□ -1.73
NXF3-201ENST00000395065 FBN3Q75N90 2809 aa4.26□□□□□ -1.73
NXF3-201ENST00000395065 DNAJC9-AS1A6NH13 148 aa4.26□□□□□ -1.73
NXF3-201ENST00000395065 PRYO14603 147 aa4.26□□□□□ -1.73
NXF3-201ENST00000395065 ESRGQ1W209 222 aa4.26□□□□□ -1.73
NXF3-201ENST00000395065 ESM1Q9NQ30 184 aa4.26□□□□□ -1.73
NXF3-201ENST00000395065 C19orf73Q9NVV2 129 aa4.26□□□□□ -1.73
NXF3-201ENST00000395065 CELA1Q9UNI1 258 aa4.26□□□□□ -1.73
NXF3-201ENST00000395065 V9GYY9 64 aa4.26□□□□□ -1.73
NXF3-201ENST00000395065 FBN1P35555 2871 aaKnown RBP4.26□□□□□ -1.73
NXF3-201ENST00000395065 IGKV4-1P06312 121 aa4.25□□□□□ -1.73
NXF3-201ENST00000395065 COX7BP24311 80 aa4.25□□□□□ -1.73
NXF3-201ENST00000395065 LINC00269Q8N2A0 174 aa4.25□□□□□ -1.73
NXF3-201ENST00000395065 SCXQ7RTU7 201 aa4.25□□□□□ -1.73
NXF3-201ENST00000395065 LINC01006Q8NI28 216 aa4.25□□□□□ -1.73
NXF3-201ENST00000395065 CHCHD10Q8WYQ3 142 aaPredicted RBP4.25□□□□□ -1.73
NXF3-201ENST00000395065 FAM229AH3BQW9 127 aa4.24□□□□□ -1.73
NXF3-201ENST00000395065 GYPEP15421 78 aa4.24□□□□□ -1.73
NXF3-201ENST00000395065 ELOF1P60002 83 aaKnown RBP4.24□□□□□ -1.73
NXF3-201ENST00000395065 SEC61GP60059 68 aa4.24□□□□□ -1.73
NXF3-201ENST00000395065 CLPSL2Q6UWE3 100 aa4.24□□□□□ -1.73
NXF3-201ENST00000395065 DIRC1Q969H9 104 aa4.24□□□□□ -1.73
NXF3-201ENST00000395065 JMJD1CQ15652 2540 aa4.23□□□□□ -1.73
NXF3-201ENST00000395065 GVQW2A0A096LPI5 108 aaPredicted RBP4.23□□□□□ -1.73
NXF3-201ENST00000395065 LCE6AA0A183 80 aa4.23□□□□□ -1.73
NXF3-201ENST00000395065 FUSP35637 526 aaKnown RBP eCLIP4.23□□□□□ -1.73
NXF3-201ENST00000395065 C10orf25Q5T742 122 aa4.23□□□□□ -1.73
NXF3-201ENST00000395065 UNQ6190/PRO20217Q6UXQ8 127 aa4.23□□□□□ -1.73
NXF3-201ENST00000395065 SMR3AQ99954 134 aa4.23□□□□□ -1.73
NXF3-201ENST00000395065 NSD1Q96L73 2696 aaPredicted RBP4.23□□□□□ -1.73
NXF3-201ENST00000395065 PRR15Q8IV56 129 aa4.23□□□□□ -1.73
NXF3-201ENST00000395065 MPLKIPQ8TAP9 179 aa4.23□□□□□ -1.73
NXF3-201ENST00000395065 hDV103S1A0JD37 113 aa4.22□□□□□ -1.73
NXF3-201ENST00000395065 ZNF73O43830 326 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms