RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 H7BZZ5 65 aa4□□□□□ -1.77
RFFL-202ENST00000394597 C11orf72Q8NBR9 251 aa4□□□□□ -1.77
RFFL-202ENST00000394597 DIRC1Q969H9 104 aa4□□□□□ -1.77
RFFL-202ENST00000394597 CELA1Q9UNI1 258 aa4□□□□□ -1.77
RFFL-202ENST00000394597 BCE1O60756 84 aa4□□□□□ -1.77
RFFL-202ENST00000394597 CHCHD7Q9BUK0 85 aa4□□□□□ -1.77
RFFL-202ENST00000394597 KLK12Q9UKR0 248 aa4□□□□□ -1.77
RFFL-202ENST00000394597 LOC400499M0QZD8 3231 aa4□□□□□ -1.77
RFFL-202ENST00000394597 ASPMQ8IZT6 3477 aa4□□□□□ -1.77
RFFL-202ENST00000394597 CDK2AP2O75956 126 aa4□□□□□ -1.77
RFFL-202ENST00000394597 CR1P17927 2039 aa3.99□□□□□ -1.77
RFFL-202ENST00000394597 ATMQ13315 3056 aa3.99□□□□□ -1.77
RFFL-202ENST00000394597 TRAV10A0A0B4J240 114 aa3.99□□□□□ -1.77
RFFL-202ENST00000394597 Q6ZSN1 163 aa3.99□□□□□ -1.77
RFFL-202ENST00000394597 FLNCQ14315 2725 aa3.99□□□□□ -1.77
RFFL-202ENST00000394597 FAM30AQ9NZY2 134 aa3.99□□□□□ -1.77
RFFL-202ENST00000394597 ADGRG4Q8IZF6 3080 aa3.99□□□□□ -1.77
RFFL-202ENST00000394597 C3orf84H3BNL1 204 aa3.99□□□□□ -1.77
RFFL-202ENST00000394597 OXTP01178 125 aa3.99□□□□□ -1.77
RFFL-202ENST00000394597 UBE2AP49459 152 aa3.99□□□□□ -1.77
RFFL-202ENST00000394597 LINC00269Q8N2A0 174 aa3.99□□□□□ -1.77
RFFL-202ENST00000394597 TM2D3Q9BRN9 247 aa3.99□□□□□ -1.77
RFFL-202ENST00000394597 A8MTW9 85 aa3.98□□□□□ -1.77
RFFL-202ENST00000394597 KLKP1Q107X0 134 aa3.98□□□□□ -1.77
RFFL-202ENST00000394597 NKAPP1Q8N9T2 125 aa3.98□□□□□ -1.77
RFFL-202ENST00000394597 COX7BP24311 80 aa3.98□□□□□ -1.77
RFFL-202ENST00000394597 KRTAP10-3P60369 221 aa3.98□□□□□ -1.77
RFFL-202ENST00000394597 CD164Q04900 197 aa3.98□□□□□ -1.77
RFFL-202ENST00000394597 CHD6Q8TD26 2715 aa3.98□□□□□ -1.77
RFFL-202ENST00000394597 PRR3P79522 188 aaKnown RBP3.98□□□□□ -1.77
RFFL-202ENST00000394597 REG3AQ06141 175 aa3.98□□□□□ -1.77
RFFL-202ENST00000394597 CDC42SE2Q9NRR3 84 aa3.98□□□□□ -1.77
RFFL-202ENST00000394597 IGLV5-39A0A0G2JS06 123 aa3.97□□□□□ -1.77
RFFL-202ENST00000394597 KPRPQ5T749 579 aaPredicted RBP3.97□□□□□ -1.77
RFFL-202ENST00000394597 LELP1Q5T871 98 aa3.97□□□□□ -1.77
RFFL-202ENST00000394597 A0A0J9YWU9 116 aa3.97□□□□□ -1.77
RFFL-202ENST00000394597 MAP1AP78559 2803 aaPredicted RBP3.97□□□□□ -1.77
RFFL-202ENST00000394597 CXCL6P80162 114 aa3.97□□□□□ -1.77
RFFL-202ENST00000394597 PRR15LQ9BU68 103 aa3.97□□□□□ -1.77
RFFL-202ENST00000394597 HIGD2AQ9BW72 106 aa3.97□□□□□ -1.77
RFFL-202ENST00000394597 NDUFB1O75438 58 aa3.96□□□□□ -1.78
RFFL-202ENST00000394597 CAMK2N2Q96S95 79 aa3.96□□□□□ -1.78
RFFL-202ENST00000394597 Q8N9L7 120 aa3.96□□□□□ -1.78
RFFL-202ENST00000394597 CHCHD10Q8WYQ3 142 aaPredicted RBP3.96□□□□□ -1.78
RFFL-202ENST00000394597 SPAG11BQ08648 103 aa3.96□□□□□ -1.78
RFFL-202ENST00000394597 C9orf129Q5T035 196 aaKnown RBP3.95□□□□□ -1.78
RFFL-202ENST00000394597 NBEAQ8NFP9 2946 aa3.95□□□□□ -1.78
RFFL-202ENST00000394597 LINC00959A0A1B0GUT2 108 aa3.95□□□□□ -1.78
RFFL-202ENST00000394597 X6R8D5 127 aa3.95□□□□□ -1.78
RFFL-202ENST00000394597 UNC79Q9P2D8 2635 aa3.95□□□□□ -1.78
RFFL-202ENST00000394597 C19orf73Q9NVV2 129 aa3.94□□□□□ -1.78
RFFL-202ENST00000394597 DCHS1Q96JQ0 3298 aa3.94□□□□□ -1.78
RFFL-202ENST00000394597 LRBAP50851 2863 aa3.94□□□□□ -1.78
RFFL-202ENST00000394597 IGLV5-45A0A087WSX0 123 aa3.94□□□□□ -1.78
RFFL-202ENST00000394597 C4orf48Q5BLP8 95 aa3.94□□□□□ -1.78
RFFL-202ENST00000394597 MUC7Q8TAX7 377 aa3.94□□□□□ -1.78
RFFL-202ENST00000394597 KALRNO60229 2985 aa3.94□□□□□ -1.78
RFFL-202ENST00000394597 CD164L2Q6UWJ8 174 aa3.94□□□□□ -1.78
RFFL-202ENST00000394597 Q6ZTC4 211 aa3.94□□□□□ -1.78
RFFL-202ENST00000394597 COL12A1Q99715 3063 aa3.94□□□□□ -1.78
RFFL-202ENST00000394597 IGKV2-28A0A075B6P5 120 aa3.94□□□□□ -1.78
RFFL-202ENST00000394597 NDUFS5O43920 106 aa3.94□□□□□ -1.78
RFFL-202ENST00000394597 IGKV2D-28P01615 120 aa3.94□□□□□ -1.78
RFFL-202ENST00000394597 FP248Q71RG6 208 aaPredicted RBP3.94□□□□□ -1.78
RFFL-202ENST00000394597 CSNK1G2-AS1Q8NCQ2 148 aa3.94□□□□□ -1.78
RFFL-202ENST00000394597 Q9UF83 564 aa3.94□□□□□ -1.78
RFFL-202ENST00000394597 BSNQ9UPA5 3926 aa3.93□□□□□ -1.78
RFFL-202ENST00000394597 XAGE1AQ9HD64 81 aa3.93□□□□□ -1.78
RFFL-202ENST00000394597 Q6ZQT0 140 aa3.93□□□□□ -1.78
RFFL-202ENST00000394597 IGLV4-60A0A075B6I1 120 aa3.92□□□□□ -1.78
RFFL-202ENST00000394597 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.92□□□□□ -1.78
RFFL-202ENST00000394597 LINC00575Q6W349 94 aa3.92□□□□□ -1.78
RFFL-202ENST00000394597 A0A1B0GUV1 79 aa3.92□□□□□ -1.78
RFFL-202ENST00000394597 SMG1Q96Q15 3661 aaKnown RBP3.92□□□□□ -1.78
RFFL-202ENST00000394597 GIG44P09565 113 aaPredicted RBP3.92□□□□□ -1.78
RFFL-202ENST00000394597 WFDC10BQ8IUB3 73 aa3.92□□□□□ -1.78
RFFL-202ENST00000394597 WFDC13Q8IUB5 93 aa3.92□□□□□ -1.78
RFFL-202ENST00000394597 TEX15Q9BXT5 2789 aa3.92□□□□□ -1.78
RFFL-202ENST00000394597 ETDCA0A1B0GVM5 59 aa3.91□□□□□ -1.78
RFFL-202ENST00000394597 A8MUN3 132 aa3.91□□□□□ -1.78
RFFL-202ENST00000394597 Q8IZM0 81 aa3.91□□□□□ -1.78
RFFL-202ENST00000394597 SPATA3Q8NHX4 192 aa3.91□□□□□ -1.78
RFFL-202ENST00000394597 ZZEF1O43149 2961 aa3.91□□□□□ -1.78
RFFL-202ENST00000394597 C9orf116Q5BN46 136 aaPredicted RBP3.91□□□□□ -1.78
RFFL-202ENST00000394597 LYPD5Q6UWN5 251 aa3.91□□□□□ -1.78
RFFL-202ENST00000394597 LINC00208Q96KT6 92 aa3.91□□□□□ -1.78
RFFL-202ENST00000394597 ITPR1Q14643 2758 aa3.91□□□□□ -1.78
RFFL-202ENST00000394597 Q8NAQ8 132 aa3.91□□□□□ -1.78
RFFL-202ENST00000394597 ZNF73O43830 326 aaPredicted RBP3.9□□□□□ -1.78
RFFL-202ENST00000394597 PRR15Q8IV56 129 aa3.9□□□□□ -1.78
RFFL-202ENST00000394597 STAB1Q9NY15 2570 aa3.9□□□□□ -1.78
RFFL-202ENST00000394597 IGKV2-24A0A0C4DH68 120 aa3.9□□□□□ -1.79
RFFL-202ENST00000394597 COX17Q14061 63 aa3.9□□□□□ -1.79
RFFL-202ENST00000394597 LIMD2Q9BT23 127 aa3.9□□□□□ -1.79
RFFL-202ENST00000394597 BAHCC1Q9P281 2608 aa3.9□□□□□ -1.79
RFFL-202ENST00000394597 KRTAP10-11P60412 298 aa3.9□□□□□ -1.79
RFFL-202ENST00000394597 SMIM29Q86T20 159 aa3.9□□□□□ -1.79
RFFL-202ENST00000394597 UTP20O75691 2785 aaKnown RBP3.89□□□□□ -1.79
RFFL-202ENST00000394597 LOC110117498A0A087WWA1 95 aa3.89□□□□□ -1.79
RFFL-202ENST00000394597 HCG22E2RYF7 251 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms