RNA–Protein interactions for RNA: ENST00000393240.7

SYT1-202, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-202ENST00000393240 HIGD2BQ4VC39 106 aa6.42□□□□□ -1.38
SYT1-202ENST00000393240 UBE2DNLQ8IWF7 75 aa6.42□□□□□ -1.38
SYT1-202ENST00000393240 CAMK2N2Q96S95 79 aa6.42□□□□□ -1.38
SYT1-202ENST00000393240 C6orf48Q9UBA6 75 aa6.42□□□□□ -1.38
SYT1-202ENST00000393240 SMCPP49901 116 aaPredicted RBP6.42□□□□□ -1.38
SYT1-202ENST00000393240 TEN1Q86WV5 123 aa6.42□□□□□ -1.38
SYT1-202ENST00000393240 TCL1BO95988 128 aa6.41□□□□□ -1.38
SYT1-202ENST00000393240 LINC00337Q8N6G1 96 aa6.41□□□□□ -1.38
SYT1-202ENST00000393240 PRKDCP78527 4128 aaKnown RBP6.41□□□□□ -1.38
SYT1-202ENST00000393240 DNAH1Q9P2D7 4330 aa6.4□□□□□ -1.38
SYT1-202ENST00000393240 B5MCH6 92 aa6.4□□□□□ -1.39
SYT1-202ENST00000393240 Q6ZRU5 148 aa6.4□□□□□ -1.39
SYT1-202ENST00000393240 RPL28P46779 137 aaKnown RBP6.39□□□□□ -1.39
SYT1-202ENST00000393240 ATXN8Q156A1 80 aa6.39□□□□□ -1.39
SYT1-202ENST00000393240 SYCNQ0VAF6 134 aa6.39□□□□□ -1.39
SYT1-202ENST00000393240 CARD19Q96LW7 228 aa6.39□□□□□ -1.39
SYT1-202ENST00000393240 USP17L23D6RBM5 183 aa6.38□□□□□ -1.39
SYT1-202ENST00000393240 KRTAP1-5Q9BYS1 174 aa6.38□□□□□ -1.39
SYT1-202ENST00000393240 NDUFC2-KCTD14E9PQ53 114 aa6.37□□□□□ -1.39
SYT1-202ENST00000393240 DNAH7Q8WXX0 4024 aa6.37□□□□□ -1.39
SYT1-202ENST00000393240 CASC10Q5T4H9 136 aa6.37□□□□□ -1.39
SYT1-202ENST00000393240 CSMD3Q7Z407 3707 aa6.37□□□□□ -1.39
SYT1-202ENST00000393240 NDUFV3P56181 108 aaKnown RBP6.36□□□□□ -1.39
SYT1-202ENST00000393240 TTC32Q5I0X7 151 aa6.36□□□□□ -1.39
SYT1-202ENST00000393240 M0QXV9 152 aa6.36□□□□□ -1.39
SYT1-202ENST00000393240 LST1O00453 97 aa6.36□□□□□ -1.39
SYT1-202ENST00000393240 GAGE2BQ13066 116 aa6.36□□□□□ -1.39
SYT1-202ENST00000393240 GAGE2EQ4V326 116 aa6.36□□□□□ -1.39
SYT1-202ENST00000393240 OR13C6PQ8NH95 151 aa6.36□□□□□ -1.39
SYT1-202ENST00000393240 SMIM11BQ8TCY0 68 aa6.36□□□□□ -1.39
SYT1-202ENST00000393240 GAGE2DQ9UEU5 116 aa6.36□□□□□ -1.39
SYT1-202ENST00000393240 SNCGO76070 127 aa6.36□□□□□ -1.39
SYT1-202ENST00000393240 Q6Q795 121 aa6.36□□□□□ -1.39
SYT1-202ENST00000393240 TMEM126AQ9H061 195 aa6.36□□□□□ -1.39
SYT1-202ENST00000393240 TRBV10-2A0A0K0K1G8 114 aa6.35□□□□□ -1.39
SYT1-202ENST00000393240 TLX1NBP0CAT3 122 aa6.35□□□□□ -1.39
SYT1-202ENST00000393240 PRR3P79522 188 aaKnown RBP6.35□□□□□ -1.39
SYT1-202ENST00000393240 NBDYA0A0U1RRE5 68 aa6.35□□□□□ -1.39
SYT1-202ENST00000393240 LINC01620Q4KN68 170 aa6.35□□□□□ -1.39
SYT1-202ENST00000393240 ANKRD29Q8N6D5 301 aa6.35□□□□□ -1.39
SYT1-202ENST00000393240 Q8NDZ9 215 aa6.35□□□□□ -1.39
SYT1-202ENST00000393240 SLPIP03973 132 aa6.34□□□□□ -1.39
SYT1-202ENST00000393240 SMIM20Q8N5G0 67 aa6.34□□□□□ -1.39
SYT1-202ENST00000393240 CLEC2BQ92478 149 aa6.34□□□□□ -1.39
SYT1-202ENST00000393240 H0YGX0 51 aa6.34□□□□□ -1.4
SYT1-202ENST00000393240 LINC01600Q96MT4 127 aa6.34□□□□□ -1.4
SYT1-202ENST00000393240 XAGE1AQ9HD64 81 aa6.34□□□□□ -1.4
SYT1-202ENST00000393240 PLECQ15149 4684 aaKnown RBP6.33□□□□□ -1.4
SYT1-202ENST00000393240 Q6ZRP5 223 aa6.33□□□□□ -1.4
SYT1-202ENST00000393240 LYSTQ99698 3801 aa6.33□□□□□ -1.4
SYT1-202ENST00000393240 C9JAW5 83 aa6.33□□□□□ -1.4
SYT1-202ENST00000393240 PSCAO43653 123 aa6.33□□□□□ -1.4
SYT1-202ENST00000393240 SLC25A20O43772 301 aa6.32□□□□□ -1.4
SYT1-202ENST00000393240 CCDC179H3BU77 68 aa6.32□□□□□ -1.4
SYT1-202ENST00000393240 NCR3O14931 201 aa6.32□□□□□ -1.4
SYT1-202ENST00000393240 IGLV6-57P01721 117 aa6.32□□□□□ -1.4
SYT1-202ENST00000393240 TRACP01848 142 aa6.32□□□□□ -1.4
SYT1-202ENST00000393240 S100A7L2Q5SY68 101 aa6.32□□□□□ -1.4
SYT1-202ENST00000393240 LECT2O14960 151 aa6.31□□□□□ -1.4
SYT1-202ENST00000393240 VPREB1P12018 145 aa6.31□□□□□ -1.4
SYT1-202ENST00000393240 C14orf177Q52M58 125 aa6.31□□□□□ -1.4
SYT1-202ENST00000393240 CNBPP62633 177 aaKnown RBP6.3□□□□□ -1.4
SYT1-202ENST00000393240 RPL18AQ02543 176 aaKnown RBP6.3□□□□□ -1.4
SYT1-202ENST00000393240 H3BT86 120 aa6.3□□□□□ -1.4
SYT1-202ENST00000393240 PLA2G2DQ9UNK4 145 aa6.3□□□□□ -1.4
SYT1-202ENST00000393240 FBN3Q75N90 2809 aa6.3□□□□□ -1.4
SYT1-202ENST00000393240 M0R378 163 aa6.29□□□□□ -1.4
SYT1-202ENST00000393240 C9orf129Q5T035 196 aaKnown RBP6.29□□□□□ -1.4
SYT1-202ENST00000393240 FAM218AQ96MZ4 157 aa6.29□□□□□ -1.4
SYT1-202ENST00000393240 STARD9Q9P2P6 4700 aa6.29□□□□□ -1.4
SYT1-202ENST00000393240 Q6ZRN7 208 aaPredicted RBP6.29□□□□□ -1.4
SYT1-202ENST00000393240 LOC107984640A0A0U1RRK4 108 aa6.28□□□□□ -1.4
SYT1-202ENST00000393240 A0A1B0GX51 115 aa6.28□□□□□ -1.4
SYT1-202ENST00000393240 WWC2-AS2Q96NR7 200 aa6.28□□□□□ -1.4
SYT1-202ENST00000393240 VPS13DQ5THJ4 4388 aa6.28□□□□□ -1.4
SYT1-202ENST00000393240 TRBV10-3A0A0K0K1G6 114 aa6.27□□□□□ -1.41
SYT1-202ENST00000393240 LRCOL1A6NCL2 159 aa6.27□□□□□ -1.41
SYT1-202ENST00000393240 A0A087WYN8 130 aa6.27□□□□□ -1.41
SYT1-202ENST00000393240 C6orf99Q4VX62 202 aa6.27□□□□□ -1.41
SYT1-202ENST00000393240 TENM2Q9NT68 2774 aa6.26□□□□□ -1.41
SYT1-202ENST00000393240 IGLV5-37A0A075B6J1 123 aa6.26□□□□□ -1.41
SYT1-202ENST00000393240 TRAV23DV6A0A075B6W5 121 aa6.26□□□□□ -1.41
SYT1-202ENST00000393240 Q6ZR54 194 aa6.26□□□□□ -1.41
SYT1-202ENST00000393240 DNAL4O96015 105 aa6.25□□□□□ -1.41
SYT1-202ENST00000393240 TRBV7-6A0A0J9YX20 115 aa6.25□□□□□ -1.41
SYT1-202ENST00000393240 NKAPP1Q8N9T2 125 aa6.25□□□□□ -1.41
SYT1-202ENST00000393240 M0R2N4 97 aa6.24□□□□□ -1.41
SYT1-202ENST00000393240 BAALC-AS2P0C853 105 aa6.24□□□□□ -1.41
SYT1-202ENST00000393240 SERTAD4-AS1Q5TG53 156 aa6.24□□□□□ -1.41
SYT1-202ENST00000393240 LINC00167Q96N53 147 aa6.24□□□□□ -1.41
SYT1-202ENST00000393240 C16orf90A8MZG2 172 aa6.24□□□□□ -1.41
SYT1-202ENST00000393240 ZNF73O43830 326 aaPredicted RBP6.24□□□□□ -1.41
SYT1-202ENST00000393240 Q8N814 137 aa6.24□□□□□ -1.41
SYT1-202ENST00000393240 DIRC1Q969H9 104 aa6.24□□□□□ -1.41
SYT1-202ENST00000393240 PKIGQ9Y2B9 76 aa6.24□□□□□ -1.41
SYT1-202ENST00000393240 DNAH10Q8IVF4 4471 aa6.24□□□□□ -1.41
SYT1-202ENST00000393240 LINC00575Q6W349 94 aa6.23□□□□□ -1.41
SYT1-202ENST00000393240 FAM240AA0A1B0GVK7 77 aa6.23□□□□□ -1.41
SYT1-202ENST00000393240 C9orf163Q8N9P6 203 aa6.22□□□□□ -1.41
SYT1-202ENST00000393240 C7orf33Q8WU49 177 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms