RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 C9orf116Q5BN46 136 aaPredicted RBP7.38□□□□□ -1.23
CALD1-203ENST00000393118 PRR3P79522 188 aaKnown RBP7.38□□□□□ -1.23
CALD1-203ENST00000393118 IGHV4-30-4P0DP06 118 aa7.37□□□□□ -1.23
CALD1-203ENST00000393118 A0A087WZ39 114 aa7.37□□□□□ -1.23
CALD1-203ENST00000393118 FAM218AQ96MZ4 157 aa7.37□□□□□ -1.23
CALD1-203ENST00000393118 IGLV5-45A0A087WSX0 123 aa7.37□□□□□ -1.23
CALD1-203ENST00000393118 WIPF1O43516 503 aa7.37□□□□□ -1.23
CALD1-203ENST00000393118 CAMK2N2Q96S95 79 aa7.37□□□□□ -1.23
CALD1-203ENST00000393118 XAGE1AQ9HD64 81 aa7.36□□□□□ -1.23
CALD1-203ENST00000393118 CSMD2Q7Z408 3487 aa7.36□□□□□ -1.23
CALD1-203ENST00000393118 MIFP14174 115 aa7.36□□□□□ -1.23
CALD1-203ENST00000393118 MRPL55Q7Z7F7 128 aaKnown RBP7.35□□□□□ -1.23
CALD1-203ENST00000393118 SPTSSBQ8NFR3 76 aa7.35□□□□□ -1.23
CALD1-203ENST00000393118 CYSTM1Q9H1C7 97 aa7.35□□□□□ -1.23
CALD1-203ENST00000393118 MGAM2Q2M2H8 2515 aa7.35□□□□□ -1.23
CALD1-203ENST00000393118 IGHV3OR16-9A0A0B4J2B5 98 aa7.35□□□□□ -1.23
CALD1-203ENST00000393118 ATP5EP2Q5VTU8 51 aa7.35□□□□□ -1.23
CALD1-203ENST00000393118 CD164L2Q6UWJ8 174 aa7.35□□□□□ -1.23
CALD1-203ENST00000393118 Q8N3U1 123 aa7.35□□□□□ -1.23
CALD1-203ENST00000393118 FUSP35637 526 aaKnown RBP eCLIP7.35□□□□□ -1.23
CALD1-203ENST00000393118 RPL28P46779 137 aaKnown RBP7.35□□□□□ -1.23
CALD1-203ENST00000393118 LINC00337Q8N6G1 96 aa7.35□□□□□ -1.23
CALD1-203ENST00000393118 TMEM256-PLSCR3K7ERE1 68 aa7.34□□□□□ -1.23
CALD1-203ENST00000393118 KRTAP1-1Q07627 177 aa7.34□□□□□ -1.23
CALD1-203ENST00000393118 TRBV7-6A0A0J9YX20 115 aa7.34□□□□□ -1.23
CALD1-203ENST00000393118 C19orf73Q9NVV2 129 aa7.34□□□□□ -1.23
CALD1-203ENST00000393118 FAM104AQ969W3 186 aa7.34□□□□□ -1.23
CALD1-203ENST00000393118 CSNK1G2-AS1Q8NCQ2 148 aa7.33□□□□□ -1.24
CALD1-203ENST00000393118 CELA1Q9UNI1 258 aa7.33□□□□□ -1.24
CALD1-203ENST00000393118 NOTCH1P46531 2555 aa7.33□□□□□ -1.24
CALD1-203ENST00000393118 PLAC8L1A1L4L8 177 aa7.33□□□□□ -1.24
CALD1-203ENST00000393118 X6R8D5 127 aa7.33□□□□□ -1.24
CALD1-203ENST00000393118 TRAV7A0A075B6U4 112 aa7.33□□□□□ -1.24
CALD1-203ENST00000393118 PRR4Q16378 134 aa7.33□□□□□ -1.24
CALD1-203ENST00000393118 C6orf99Q4VX62 202 aa7.32□□□□□ -1.24
CALD1-203ENST00000393118 UNQ6190/PRO20217Q6UXQ8 127 aa7.32□□□□□ -1.24
CALD1-203ENST00000393118 LINC01561Q8N1V8 128 aa7.32□□□□□ -1.24
CALD1-203ENST00000393118 C2orf48Q96LS8 159 aa7.32□□□□□ -1.24
CALD1-203ENST00000393118 LINC00474Q9P2X8 69 aa7.32□□□□□ -1.24
CALD1-203ENST00000393118 CCKP06307 115 aa7.32□□□□□ -1.24
CALD1-203ENST00000393118 KRTAP10-3P60369 221 aa7.32□□□□□ -1.24
CALD1-203ENST00000393118 Q8IZM0 81 aa7.32□□□□□ -1.24
CALD1-203ENST00000393118 IL17DQ8TAD2 202 aa7.31□□□□□ -1.24
CALD1-203ENST00000393118 C6orf223Q8N319 242 aa7.31□□□□□ -1.24
CALD1-203ENST00000393118 KPRPQ5T749 579 aaPredicted RBP7.3□□□□□ -1.24
CALD1-203ENST00000393118 LELP1Q5T871 98 aa7.3□□□□□ -1.24
CALD1-203ENST00000393118 F8WDY8 70 aa7.3□□□□□ -1.24
CALD1-203ENST00000393118 NKAPP1Q8N9T2 125 aa7.3□□□□□ -1.24
CALD1-203ENST00000393118 A0A1B0GUV1 79 aa7.29□□□□□ -1.24
CALD1-203ENST00000393118 CYSRT1A8MQ03 144 aa7.29□□□□□ -1.24
CALD1-203ENST00000393118 SPATA3Q8NHX4 192 aa7.29□□□□□ -1.24
CALD1-203ENST00000393118 NIPBLQ6KC79 2804 aaeCLIP7.28□□□□□ -1.24
CALD1-203ENST00000393118 DEFB131BA0A096LNP1 70 aa7.28□□□□□ -1.24
CALD1-203ENST00000393118 PSPHP1O15172 72 aa7.28□□□□□ -1.24
CALD1-203ENST00000393118 C11orf45Q8TAV5 145 aa7.28□□□□□ -1.24
CALD1-203ENST00000393118 STAB1Q9NY15 2570 aa7.28□□□□□ -1.24
CALD1-203ENST00000393118 DEFB105AQ8NG35 78 aa7.27□□□□□ -1.24
CALD1-203ENST00000393118 NDUFC1O43677 76 aa7.27□□□□□ -1.25
CALD1-203ENST00000393118 OXTP01178 125 aa7.27□□□□□ -1.25
CALD1-203ENST00000393118 Q6ZTC4 211 aa7.27□□□□□ -1.25
CALD1-203ENST00000393118 PMAIP1Q13794 54 aa7.27□□□□□ -1.25
CALD1-203ENST00000393118 NREPQ16612 68 aa7.27□□□□□ -1.25
CALD1-203ENST00000393118 Q5XG85 94 aa7.27□□□□□ -1.25
CALD1-203ENST00000393118 NANOS2P60321 138 aaKnown RBP7.27□□□□□ -1.25
CALD1-203ENST00000393118 UBE2DNLQ8IWF7 75 aa7.26□□□□□ -1.25
CALD1-203ENST00000393118 COL6A5A8TX70 2615 aa7.26□□□□□ -1.25
CALD1-203ENST00000393118 VPS13CQ709C8 3753 aa7.26□□□□□ -1.25
CALD1-203ENST00000393118 PSCAO43653 123 aa7.26□□□□□ -1.25
CALD1-203ENST00000393118 DIRC1Q969H9 104 aa7.25□□□□□ -1.25
CALD1-203ENST00000393118 IGKV2-28A0A075B6P5 120 aa7.25□□□□□ -1.25
CALD1-203ENST00000393118 IGKV2D-28P01615 120 aa7.25□□□□□ -1.25
CALD1-203ENST00000393118 A0A0J9YWU9 116 aa7.25□□□□□ -1.25
CALD1-203ENST00000393118 ATP5EP56381 51 aaPredicted RBP7.25□□□□□ -1.25
CALD1-203ENST00000393118 WFDC10BQ8IUB3 73 aa7.25□□□□□ -1.25
CALD1-203ENST00000393118 C9orf129Q5T035 196 aaKnown RBP7.24□□□□□ -1.25
CALD1-203ENST00000393118 Q6ZQY7 126 aa7.23□□□□□ -1.25
CALD1-203ENST00000393118 NBEAL1Q6ZS30 2694 aa7.23□□□□□ -1.25
CALD1-203ENST00000393118 TRAV10A0A0B4J240 114 aa7.23□□□□□ -1.25
CALD1-203ENST00000393118 C10orf25Q5T742 122 aa7.23□□□□□ -1.25
CALD1-203ENST00000393118 TMEM254Q8TBM7 123 aa7.22□□□□□ -1.25
CALD1-203ENST00000393118 BPY2O14599 106 aa7.22□□□□□ -1.25
CALD1-203ENST00000393118 LYPD5Q6UWN5 251 aa7.22□□□□□ -1.25
CALD1-203ENST00000393118 COX17Q14061 63 aa7.22□□□□□ -1.25
CALD1-203ENST00000393118 FAM19A3Q7Z5A8 133 aa7.22□□□□□ -1.25
CALD1-203ENST00000393118 Q8NAQ8 132 aa7.21□□□□□ -1.25
CALD1-203ENST00000393118 HIVEP1P15822 2718 aa7.21□□□□□ -1.25
CALD1-203ENST00000393118 COX7BP24311 80 aa7.21□□□□□ -1.26
CALD1-203ENST00000393118 LINC01547P58512 204 aaPredicted RBP7.21□□□□□ -1.26
CALD1-203ENST00000393118 ESRGQ1W209 222 aa7.21□□□□□ -1.26
CALD1-203ENST00000393118 Q8N9L7 120 aa7.2□□□□□ -1.26
CALD1-203ENST00000393118 NSD1Q96L73 2696 aaPredicted RBP7.2□□□□□ -1.26
CALD1-203ENST00000393118 Q6ZVQ6 151 aa7.2□□□□□ -1.26
CALD1-203ENST00000393118 Q8N814 137 aa7.2□□□□□ -1.26
CALD1-203ENST00000393118 TRBV10-3A0A0K0K1G6 114 aa7.2□□□□□ -1.26
CALD1-203ENST00000393118 H7BZZ5 65 aa7.2□□□□□ -1.26
CALD1-203ENST00000393118 C3orf84H3BNL1 204 aa7.19□□□□□ -1.26
CALD1-203ENST00000393118 PRYO14603 147 aa7.19□□□□□ -1.26
CALD1-203ENST00000393118 TM2D3Q9BRN9 247 aa7.19□□□□□ -1.26
CALD1-203ENST00000393118 FAM30AQ9NZY2 134 aa7.18□□□□□ -1.26
CALD1-203ENST00000393118 SYCNQ0VAF6 134 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms