RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 ERG28Q9UKR5 140 aa9.72□□□□□ -0.85
PTPRK-208ENST00000392449 HBDP02042 147 aa9.71□□□□□ -0.86
PTPRK-208ENST00000392449 BAGE3Q86Y29 109 aa9.69□□□□□ -0.86
PTPRK-208ENST00000392449 TMEM170BQ5T4T1 132 aa9.68□□□□□ -0.86
PTPRK-208ENST00000392449 FAM19A1Q7Z5A9 133 aa9.68□□□□□ -0.86
PTPRK-208ENST00000392449 RETNLBQ9BQ08 111 aa9.68□□□□□ -0.86
PTPRK-208ENST00000392449 TMEM126AQ9H061 195 aa9.68□□□□□ -0.86
PTPRK-208ENST00000392449 M0R378 163 aa9.66□□□□□ -0.86
PTPRK-208ENST00000392449 A0A0U1RRA0 63 aa9.65□□□□□ -0.87
PTPRK-208ENST00000392449 APOC3P02656 99 aa9.65□□□□□ -0.87
PTPRK-208ENST00000392449 COX17Q14061 63 aa9.64□□□□□ -0.87
PTPRK-208ENST00000392449 FAM229BQ4G0N7 80 aa9.64□□□□□ -0.87
PTPRK-208ENST00000392449 RPL24P83731 157 aaKnown RBP9.63□□□□□ -0.87
PTPRK-208ENST00000392449 XP32Q5T750 250 aa9.63□□□□□ -0.87
PTPRK-208ENST00000392449 LINC00304Q8N9R0 145 aa9.63□□□□□ -0.87
PTPRK-208ENST00000392449 CHTOPQ9Y3Y2 248 aaKnown RBP9.63□□□□□ -0.87
PTPRK-208ENST00000392449 LINC00158P58513 81 aa9.62□□□□□ -0.87
PTPRK-208ENST00000392449 IGKV2D-26A0A0A0MRZ7 120 aa9.6□□□□□ -0.87
PTPRK-208ENST00000392449 C3orf22Q8N5N4 141 aa9.6□□□□□ -0.87
PTPRK-208ENST00000392449 PLEKHB2Q96CS7 222 aa9.6□□□□□ -0.87
PTPRK-208ENST00000392449 TMEM223A0PJW6 202 aa9.59□□□□□ -0.87
PTPRK-208ENST00000392449 CBLN2Q8IUK8 224 aa9.59□□□□□ -0.87
PTPRK-208ENST00000392449 HIGD2AQ9BW72 106 aa9.59□□□□□ -0.87
PTPRK-208ENST00000392449 YPEL4Q96NS1 127 aa9.59□□□□□ -0.87
PTPRK-208ENST00000392449 SNAPINO95295 136 aa9.58□□□□□ -0.88
PTPRK-208ENST00000392449 SMIM13P0DJ93 91 aa9.58□□□□□ -0.88
PTPRK-208ENST00000392449 SFTA2Q6UW10 78 aa9.58□□□□□ -0.88
PTPRK-208ENST00000392449 IFI27L1Q96BM0 104 aa9.58□□□□□ -0.88
PTPRK-208ENST00000392449 SVBPQ8N300 66 aa9.57□□□□□ -0.88
PTPRK-208ENST00000392449 TRAV12-1A0A0B4J245 112 aa9.55□□□□□ -0.88
PTPRK-208ENST00000392449 NCR3O14931 201 aa9.55□□□□□ -0.88
PTPRK-208ENST00000392449 FAM19A2Q8N3H0 131 aa9.55□□□□□ -0.88
PTPRK-208ENST00000392449 CHCHD1Q96BP2 118 aaKnown RBP9.55□□□□□ -0.88
PTPRK-208ENST00000392449 NDUFA5Q16718 116 aa9.54□□□□□ -0.88
PTPRK-208ENST00000392449 MEIG1Q5JSS6 88 aa9.53□□□□□ -0.88
PTPRK-208ENST00000392449 BOD1L2Q8IYS8 172 aa9.53□□□□□ -0.88
PTPRK-208ENST00000392449 MIR7-3HGQ8N6C7 128 aa9.53□□□□□ -0.88
PTPRK-208ENST00000392449 SPRR4Q96PI1 79 aa9.53□□□□□ -0.88
PTPRK-208ENST00000392449 H0Y8G0 127 aa9.53□□□□□ -0.88
PTPRK-208ENST00000392449 IGLV7-46A0A075B6I9 117 aa9.51□□□□□ -0.89
PTPRK-208ENST00000392449 ATP6V1G1O75348 118 aa9.51□□□□□ -0.89
PTPRK-208ENST00000392449 GHRHP01286 108 aa9.5□□□□□ -0.89
PTPRK-208ENST00000392449 TSPEAR-AS2P59090 65 aa9.5□□□□□ -0.89
PTPRK-208ENST00000392449 NDUFA12Q9UI09 145 aa9.5□□□□□ -0.89
PTPRK-208ENST00000392449 PRYO14603 147 aa9.49□□□□□ -0.89
PTPRK-208ENST00000392449 HSBP1O75506 76 aa9.49□□□□□ -0.89
PTPRK-208ENST00000392449 CDIP1Q9H305 208 aa9.49□□□□□ -0.89
PTPRK-208ENST00000392449 PPDPFQ9H3Y8 114 aa9.49□□□□□ -0.89
PTPRK-208ENST00000392449 MUC17Q685J3 4493 aa9.49□□□□□ -0.89
PTPRK-208ENST00000392449 FAT4Q6V0I7 4981 aa9.49□□□□□ -0.89
PTPRK-208ENST00000392449 TPRXLQ17RH7 258 aa9.48□□□□□ -0.89
PTPRK-208ENST00000392449 DAND5Q8N907 189 aa9.48□□□□□ -0.89
PTPRK-208ENST00000392449 TRBV10-3A0A0K0K1G6 114 aa9.47□□□□□ -0.89
PTPRK-208ENST00000392449 SPRR1AP35321 89 aa9.47□□□□□ -0.89
PTPRK-208ENST00000392449 LINC00310P59036 64 aa9.47□□□□□ -0.89
PTPRK-208ENST00000392449 KCNQ1DNQ9H478 68 aa9.47□□□□□ -0.89
PTPRK-208ENST00000392449 A0A0U1RQV1 116 aa9.47□□□□□ -0.89
PTPRK-208ENST00000392449 KRTAP4-16G5E9R7 235 aaPredicted RBP9.47□□□□□ -0.89
PTPRK-208ENST00000392449 HERV-K104P63124 156 aa9.47□□□□□ -0.89
PTPRK-208ENST00000392449 SMCR5Q8TEV8 140 aa9.47□□□□□ -0.89
PTPRK-208ENST00000392449 TRGC2P03986 189 aa9.46□□□□□ -0.9
PTPRK-208ENST00000392449 LINC00337Q8N6G1 96 aa9.46□□□□□ -0.9
PTPRK-208ENST00000392449 MYMXA0A1B0GTQ4 84 aa9.45□□□□□ -0.9
PTPRK-208ENST00000392449 ETDCA0A1B0GVM5 59 aa9.45□□□□□ -0.9
PTPRK-208ENST00000392449 Q8NBF4 154 aa9.45□□□□□ -0.9
PTPRK-208ENST00000392449 PMCHL2Q9BQD1 86 aa9.45□□□□□ -0.9
PTPRK-208ENST00000392449 ZNF706Q9Y5V0 76 aaPredicted RBP9.45□□□□□ -0.9
PTPRK-208ENST00000392449 SERF1AO75920 110 aa9.44□□□□□ -0.9
PTPRK-208ENST00000392449 ERC2-IT1O76042 136 aa9.42□□□□□ -0.9
PTPRK-208ENST00000392449 LEPROTL1O95214 131 aa9.42□□□□□ -0.9
PTPRK-208ENST00000392449 SPAG11AQ6PDA7 123 aa9.42□□□□□ -0.9
PTPRK-208ENST00000392449 LEPROTO15243 131 aa9.41□□□□□ -0.9
PTPRK-208ENST00000392449 CTAG1AP78358 180 aa9.41□□□□□ -0.9
PTPRK-208ENST00000392449 MAP1LC3CQ9BXW4 147 aa9.41□□□□□ -0.9
PTPRK-208ENST00000392449 B5MCH6 92 aa9.4□□□□□ -0.9
PTPRK-208ENST00000392449 FABP4P15090 132 aa9.4□□□□□ -0.9
PTPRK-208ENST00000392449 GAGE2AQ6NT46 116 aa9.4□□□□□ -0.9
PTPRK-208ENST00000392449 LINC00587B1AMM8 73 aa9.4□□□□□ -0.91
PTPRK-208ENST00000392449 J3QQQ9 107 aa9.39□□□□□ -0.91
PTPRK-208ENST00000392449 DDTP30046 118 aa9.39□□□□□ -0.91
PTPRK-208ENST00000392449 LINC00483Q53H64 154 aa9.39□□□□□ -0.91
PTPRK-208ENST00000392449 PLNP26678 52 aa9.38□□□□□ -0.91
PTPRK-208ENST00000392449 Q9BRP9 147 aa9.38□□□□□ -0.91
PTPRK-208ENST00000392449 IGLV9-49A0A0B4J1Y8 123 aa9.37□□□□□ -0.91
PTPRK-208ENST00000392449 LOC107984156A0A0G2JMH3 177 aa9.37□□□□□ -0.91
PTPRK-208ENST00000392449 EIF4EBP3O60516 100 aaPredicted RBP9.37□□□□□ -0.91
PTPRK-208ENST00000392449 MOBPQ13875 183 aa9.37□□□□□ -0.91
PTPRK-208ENST00000392449 ARL17AQ8IVW1 177 aa9.37□□□□□ -0.91
PTPRK-208ENST00000392449 DPM2O94777 84 aa9.36□□□□□ -0.91
PTPRK-208ENST00000392449 NPC2P61916 151 aa9.36□□□□□ -0.91
PTPRK-208ENST00000392449 KRTAP13-3Q3SY46 172 aa9.35□□□□□ -0.91
PTPRK-208ENST00000392449 SOSTDC1Q6X4U4 206 aa9.35□□□□□ -0.91
PTPRK-208ENST00000392449 FP248Q71RG6 208 aaPredicted RBP9.35□□□□□ -0.91
PTPRK-208ENST00000392449 KRTAP9-2Q9BYQ4 174 aa9.35□□□□□ -0.91
PTPRK-208ENST00000392449 TRBV10-2A0A0K0K1G8 114 aa9.34□□□□□ -0.91
PTPRK-208ENST00000392449 IGKCP01834 107 aa9.34□□□□□ -0.91
PTPRK-208ENST00000392449 LGALS3P17931 250 aaKnown RBP9.34□□□□□ -0.91
PTPRK-208ENST00000392449 Q6ZRX8 168 aa9.34□□□□□ -0.91
PTPRK-208ENST00000392449 SPANXB1Q9NS25 103 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-208ENST00000392449 HSPB8Q9UJY1 196 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms