RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 NDUFV3P56181 108 aaKnown RBP7.59□□□□□ -1.19
SMARCAL1-203ENST00000392128 C6orf48Q9UBA6 75 aa7.59□□□□□ -1.19
SMARCAL1-203ENST00000392128 DNAH1Q9P2D7 4330 aa7.58□□□□□ -1.2
SMARCAL1-203ENST00000392128 TCL1BO95988 128 aa7.58□□□□□ -1.2
SMARCAL1-203ENST00000392128 UBE2DNLQ8IWF7 75 aa7.58□□□□□ -1.2
SMARCAL1-203ENST00000392128 OR13C6PQ8NH95 151 aa7.58□□□□□ -1.2
SMARCAL1-203ENST00000392128 CAMK2N2Q96S95 79 aa7.58□□□□□ -1.2
SMARCAL1-203ENST00000392128 WFDC2Q14508 124 aa7.58□□□□□ -1.2
SMARCAL1-203ENST00000392128 LINC00337Q8N6G1 96 aa7.57□□□□□ -1.2
SMARCAL1-203ENST00000392128 CSMD3Q7Z407 3707 aa7.57□□□□□ -1.2
SMARCAL1-203ENST00000392128 A0A1B0GX51 115 aa7.57□□□□□ -1.2
SMARCAL1-203ENST00000392128 NDUFC2O95298 119 aa7.57□□□□□ -1.2
SMARCAL1-203ENST00000392128 COX6CP09669 75 aa7.57□□□□□ -1.2
SMARCAL1-203ENST00000392128 Q6Q795 121 aa7.57□□□□□ -1.2
SMARCAL1-203ENST00000392128 ETDBQ3ZM63 59 aa7.56□□□□□ -1.2
SMARCAL1-203ENST00000392128 DNAH7Q8WXX0 4024 aa7.56□□□□□ -1.2
SMARCAL1-203ENST00000392128 SEC61GP60059 68 aa7.56□□□□□ -1.2
SMARCAL1-203ENST00000392128 Q6ZRU5 148 aa7.56□□□□□ -1.2
SMARCAL1-203ENST00000392128 PRO0461Q9UI25 63 aa7.55□□□□□ -1.2
SMARCAL1-203ENST00000392128 J3KT08 172 aa7.54□□□□□ -1.2
SMARCAL1-203ENST00000392128 FAM19A5Q7Z5A7 132 aaPredicted RBP7.54□□□□□ -1.2
SMARCAL1-203ENST00000392128 KRTAP1-5Q9BYS1 174 aa7.54□□□□□ -1.2
SMARCAL1-203ENST00000392128 RPS28P62857 69 aaKnown RBP7.54□□□□□ -1.2
SMARCAL1-203ENST00000392128 LYSTQ99698 3801 aa7.54□□□□□ -1.2
SMARCAL1-203ENST00000392128 USP17L23D6RBM5 183 aa7.53□□□□□ -1.2
SMARCAL1-203ENST00000392128 RPL28P46779 137 aaKnown RBP7.53□□□□□ -1.2
SMARCAL1-203ENST00000392128 ATXN8Q156A1 80 aa7.53□□□□□ -1.2
SMARCAL1-203ENST00000392128 CASC10Q5T4H9 136 aa7.53□□□□□ -1.2
SMARCAL1-203ENST00000392128 PLECQ15149 4684 aaKnown RBP7.53□□□□□ -1.2
SMARCAL1-203ENST00000392128 SYCNQ0VAF6 134 aa7.53□□□□□ -1.2
SMARCAL1-203ENST00000392128 NDUFC2-KCTD14E9PQ53 114 aa7.51□□□□□ -1.21
SMARCAL1-203ENST00000392128 Q8NDZ9 215 aa7.51□□□□□ -1.21
SMARCAL1-203ENST00000392128 GAGE2BQ13066 116 aa7.51□□□□□ -1.21
SMARCAL1-203ENST00000392128 GAGE2EQ4V326 116 aa7.51□□□□□ -1.21
SMARCAL1-203ENST00000392128 TTC32Q5I0X7 151 aa7.51□□□□□ -1.21
SMARCAL1-203ENST00000392128 SMIM11BQ8TCY0 68 aa7.51□□□□□ -1.21
SMARCAL1-203ENST00000392128 STARD9Q9P2P6 4700 aa7.51□□□□□ -1.21
SMARCAL1-203ENST00000392128 GAGE2DQ9UEU5 116 aa7.51□□□□□ -1.21
SMARCAL1-203ENST00000392128 C9JAW5 83 aa7.5□□□□□ -1.21
SMARCAL1-203ENST00000392128 LST1O00453 97 aa7.5□□□□□ -1.21
SMARCAL1-203ENST00000392128 CLEC2BQ92478 149 aa7.5□□□□□ -1.21
SMARCAL1-203ENST00000392128 CARD19Q96LW7 228 aa7.5□□□□□ -1.21
SMARCAL1-203ENST00000392128 PRR3P79522 188 aaKnown RBP7.5□□□□□ -1.21
SMARCAL1-203ENST00000392128 SMCPP49901 116 aaPredicted RBP7.49□□□□□ -1.21
SMARCAL1-203ENST00000392128 LINC01620Q4KN68 170 aa7.49□□□□□ -1.21
SMARCAL1-203ENST00000392128 TENM2Q9NT68 2774 aa7.49□□□□□ -1.21
SMARCAL1-203ENST00000392128 SLPIP03973 132 aa7.49□□□□□ -1.21
SMARCAL1-203ENST00000392128 TLX1NBP0CAT3 122 aa7.49□□□□□ -1.21
SMARCAL1-203ENST00000392128 XAGE1AQ9HD64 81 aa7.49□□□□□ -1.21
SMARCAL1-203ENST00000392128 TRBV10-2A0A0K0K1G8 114 aa7.48□□□□□ -1.21
SMARCAL1-203ENST00000392128 NBDYA0A0U1RRE5 68 aa7.48□□□□□ -1.21
SMARCAL1-203ENST00000392128 NCR3O14931 201 aa7.48□□□□□ -1.21
SMARCAL1-203ENST00000392128 Q6ZRP5 223 aa7.48□□□□□ -1.21
SMARCAL1-203ENST00000392128 LOC107984640A0A0U1RRK4 108 aa7.47□□□□□ -1.21
SMARCAL1-203ENST00000392128 LECT2O14960 151 aa7.47□□□□□ -1.21
SMARCAL1-203ENST00000392128 PSCAO43653 123 aa7.47□□□□□ -1.21
SMARCAL1-203ENST00000392128 SLC25A20O43772 301 aa7.47□□□□□ -1.21
SMARCAL1-203ENST00000392128 PPDPFLQ8WWR9 84 aa7.47□□□□□ -1.21
SMARCAL1-203ENST00000392128 LINC01600Q96MT4 127 aa7.47□□□□□ -1.21
SMARCAL1-203ENST00000392128 H0YGX0 51 aa7.46□□□□□ -1.22
SMARCAL1-203ENST00000392128 S100A7L2Q5SY68 101 aa7.46□□□□□ -1.22
SMARCAL1-203ENST00000392128 FBN3Q75N90 2809 aa7.45□□□□□ -1.22
SMARCAL1-203ENST00000392128 IGLV6-57P01721 117 aa7.45□□□□□ -1.22
SMARCAL1-203ENST00000392128 TRACP01848 142 aa7.45□□□□□ -1.22
SMARCAL1-203ENST00000392128 VPREB1P12018 145 aa7.45□□□□□ -1.22
SMARCAL1-203ENST00000392128 RPL18AQ02543 176 aaKnown RBP7.45□□□□□ -1.22
SMARCAL1-203ENST00000392128 FAM218AQ96MZ4 157 aa7.44□□□□□ -1.22
SMARCAL1-203ENST00000392128 VPS13DQ5THJ4 4388 aa7.44□□□□□ -1.22
SMARCAL1-203ENST00000392128 C9orf129Q5T035 196 aaKnown RBP7.44□□□□□ -1.22
SMARCAL1-203ENST00000392128 ANKRD29Q8N6D5 301 aa7.44□□□□□ -1.22
SMARCAL1-203ENST00000392128 C14orf177Q52M58 125 aa7.43□□□□□ -1.22
SMARCAL1-203ENST00000392128 H3BT86 120 aa7.43□□□□□ -1.22
SMARCAL1-203ENST00000392128 SNCGO76070 127 aa7.43□□□□□ -1.22
SMARCAL1-203ENST00000392128 CNBPP62633 177 aaKnown RBP7.43□□□□□ -1.22
SMARCAL1-203ENST00000392128 PRO0628Q9UI54 55 aa7.43□□□□□ -1.22
SMARCAL1-203ENST00000392128 DNAH10Q8IVF4 4471 aa7.43□□□□□ -1.22
SMARCAL1-203ENST00000392128 TEN1Q86WV5 123 aa7.42□□□□□ -1.22
SMARCAL1-203ENST00000392128 M0R378 163 aa7.42□□□□□ -1.22
SMARCAL1-203ENST00000392128 Q6ZRN7 208 aaPredicted RBP7.42□□□□□ -1.22
SMARCAL1-203ENST00000392128 PLA2G2DQ9UNK4 145 aa7.41□□□□□ -1.22
SMARCAL1-203ENST00000392128 TRBV10-3A0A0K0K1G6 114 aa7.41□□□□□ -1.22
SMARCAL1-203ENST00000392128 V9GYY9 64 aa7.41□□□□□ -1.22
SMARCAL1-203ENST00000392128 A0A087WYN8 130 aa7.4□□□□□ -1.22
SMARCAL1-203ENST00000392128 C6orf99Q4VX62 202 aa7.4□□□□□ -1.22
SMARCAL1-203ENST00000392128 WWC2-AS2Q96NR7 200 aa7.4□□□□□ -1.22
SMARCAL1-203ENST00000392128 LRCOL1A6NCL2 159 aa7.4□□□□□ -1.23
SMARCAL1-203ENST00000392128 TRAV23DV6A0A075B6W5 121 aa7.39□□□□□ -1.23
SMARCAL1-203ENST00000392128 DNAL4O96015 105 aa7.38□□□□□ -1.23
SMARCAL1-203ENST00000392128 SERTAD4-AS1Q5TG53 156 aa7.38□□□□□ -1.23
SMARCAL1-203ENST00000392128 Q6ZR54 194 aa7.38□□□□□ -1.23
SMARCAL1-203ENST00000392128 IGLV5-37A0A075B6J1 123 aa7.38□□□□□ -1.23
SMARCAL1-203ENST00000392128 M0R2N4 97 aa7.38□□□□□ -1.23
SMARCAL1-203ENST00000392128 NKAPP1Q8N9T2 125 aa7.38□□□□□ -1.23
SMARCAL1-203ENST00000392128 DIRC1Q969H9 104 aa7.37□□□□□ -1.23
SMARCAL1-203ENST00000392128 TGP01266 2768 aa7.37□□□□□ -1.23
SMARCAL1-203ENST00000392128 ZNF73O43830 326 aaPredicted RBP7.36□□□□□ -1.23
SMARCAL1-203ENST00000392128 BAALC-AS2P0C853 105 aa7.36□□□□□ -1.23
SMARCAL1-203ENST00000392128 LINC00167Q96N53 147 aa7.36□□□□□ -1.23
SMARCAL1-203ENST00000392128 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.36□□□□□ -1.23
SMARCAL1-203ENST00000392128 TRBV7-6A0A0J9YX20 115 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms