RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 M0R378 163 aa3.51□□□□□ -1.85
LTN1-202ENST00000389194 COX7CP15954 63 aa3.51□□□□□ -1.85
LTN1-202ENST00000389194 M0QXV9 152 aa3.51□□□□□ -1.85
LTN1-202ENST00000389194 PRLHP81277 87 aa3.51□□□□□ -1.85
LTN1-202ENST00000389194 FAM218AQ96MZ4 157 aa3.51□□□□□ -1.85
LTN1-202ENST00000389194 TRAV10A0A0B4J240 114 aa3.5□□□□□ -1.85
LTN1-202ENST00000389194 PDE6GP18545 87 aa3.5□□□□□ -1.85
LTN1-202ENST00000389194 PLAC8L1A1L4L8 177 aa3.5□□□□□ -1.85
LTN1-202ENST00000389194 NBEAL1Q6ZS30 2694 aa3.5□□□□□ -1.85
LTN1-202ENST00000389194 LINC00575Q6W349 94 aa3.5□□□□□ -1.85
LTN1-202ENST00000389194 Q6ZRU5 148 aa3.5□□□□□ -1.85
LTN1-202ENST00000389194 FAM19A3Q7Z5A8 133 aa3.5□□□□□ -1.85
LTN1-202ENST00000389194 C11orf72Q8NBR9 251 aa3.5□□□□□ -1.85
LTN1-202ENST00000389194 COX8CQ7Z4L0 72 aa3.5□□□□□ -1.85
LTN1-202ENST00000389194 EIF4EBP3O60516 100 aaPredicted RBP3.49□□□□□ -1.85
LTN1-202ENST00000389194 C10orf25Q5T742 122 aa3.49□□□□□ -1.85
LTN1-202ENST00000389194 RPL28P46779 137 aaKnown RBP3.49□□□□□ -1.85
LTN1-202ENST00000389194 PCOTHQ58A44 107 aa3.49□□□□□ -1.85
LTN1-202ENST00000389194 SHISA2Q6UWI4 295 aa3.49□□□□□ -1.85
LTN1-202ENST00000389194 CIRBP-AS1Q8TBR5 109 aa3.49□□□□□ -1.85
LTN1-202ENST00000389194 LINC01547P58512 204 aaPredicted RBP3.49□□□□□ -1.85
LTN1-202ENST00000389194 C1orf137Q5JT78 98 aa3.49□□□□□ -1.85
LTN1-202ENST00000389194 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.49□□□□□ -1.85
LTN1-202ENST00000389194 PSPHP1O15172 72 aa3.48□□□□□ -1.85
LTN1-202ENST00000389194 LYPD5Q6UWN5 251 aa3.48□□□□□ -1.85
LTN1-202ENST00000389194 CASC2Q6XLA1 102 aa3.48□□□□□ -1.85
LTN1-202ENST00000389194 LINC00208Q96KT6 92 aa3.48□□□□□ -1.85
LTN1-202ENST00000389194 ITPR1Q14643 2758 aa3.48□□□□□ -1.85
LTN1-202ENST00000389194 NDUFC2O95298 119 aa3.48□□□□□ -1.85
LTN1-202ENST00000389194 BEAN1Q3B7T3 259 aa3.48□□□□□ -1.85
LTN1-202ENST00000389194 UBR5O95071 2799 aaPredicted RBP3.48□□□□□ -1.85
LTN1-202ENST00000389194 UNC79Q9P2D8 2635 aa3.48□□□□□ -1.85
LTN1-202ENST00000389194 A0A087WSZ3 146 aa3.48□□□□□ -1.85
LTN1-202ENST00000389194 DMXL1Q9Y485 3027 aa3.47□□□□□ -1.85
LTN1-202ENST00000389194 KIR2DL5BQ8NHK3 375 aa3.47□□□□□ -1.85
LTN1-202ENST00000389194 COL4A2P08572 1712 aa3.47□□□□□ -1.85
LTN1-202ENST00000389194 COL6A5A8TX70 2615 aa3.47□□□□□ -1.85
LTN1-202ENST00000389194 IGHV6-1A0A0B4J1U7 121 aa3.47□□□□□ -1.85
LTN1-202ENST00000389194 NDUFC2-KCTD14E9PQ53 114 aa3.47□□□□□ -1.85
LTN1-202ENST00000389194 COX17Q14061 63 aa3.47□□□□□ -1.85
LTN1-202ENST00000389194 TNRC18O15417 2968 aaPredicted RBP3.47□□□□□ -1.85
LTN1-202ENST00000389194 H3BQ85 93 aa3.47□□□□□ -1.85
LTN1-202ENST00000389194 A6NED7 52 aa3.46□□□□□ -1.85
LTN1-202ENST00000389194 Q6JHZ5 121 aa3.46□□□□□ -1.85
LTN1-202ENST00000389194 IGHV3OR16-9A0A0B4J2B5 98 aa3.46□□□□□ -1.86
LTN1-202ENST00000389194 ESRGQ1W209 222 aa3.46□□□□□ -1.86
LTN1-202ENST00000389194 C14orf177Q52M58 125 aa3.46□□□□□ -1.86
LTN1-202ENST00000389194 LINC01556Q5JQF7 62 aa3.46□□□□□ -1.86
LTN1-202ENST00000389194 SBSPONQ8IVN8 264 aa3.46□□□□□ -1.86
LTN1-202ENST00000389194 Q6ZVQ6 151 aa3.46□□□□□ -1.86
LTN1-202ENST00000389194 PRO0461Q9UI25 63 aa3.46□□□□□ -1.86
LTN1-202ENST00000389194 ATP5EP2Q5VTU8 51 aa3.46□□□□□ -1.86
LTN1-202ENST00000389194 IMUPQ9GZP8 106 aa3.46□□□□□ -1.86
LTN1-202ENST00000389194 SPINK1P00995 79 aa3.45□□□□□ -1.86
LTN1-202ENST00000389194 REG3GQ6UW15 175 aa3.45□□□□□ -1.86
LTN1-202ENST00000389194 DHRS4-AS1Q9P1J3 65 aa3.45□□□□□ -1.86
LTN1-202ENST00000389194 FAM19A4Q96LR4 140 aa3.45□□□□□ -1.86
LTN1-202ENST00000389194 ZFHX4Q86UP3 3567 aa3.45□□□□□ -1.86
LTN1-202ENST00000389194 EGFEM1PQ0D2K5 195 aa3.45□□□□□ -1.86
LTN1-202ENST00000389194 X6R8D5 127 aa3.45□□□□□ -1.86
LTN1-202ENST00000389194 CSDC2Q9Y534 153 aaKnown RBP3.45□□□□□ -1.86
LTN1-202ENST00000389194 STAB1Q9NY15 2570 aa3.45□□□□□ -1.86
LTN1-202ENST00000389194 KIAA0087Q14695 138 aa3.44□□□□□ -1.86
LTN1-202ENST00000389194 Q9BRP9 147 aa3.44□□□□□ -1.86
LTN1-202ENST00000389194 BAHCC1Q9P281 2608 aa3.44□□□□□ -1.86
LTN1-202ENST00000389194 MRPL55Q7Z7F7 128 aaKnown RBP3.44□□□□□ -1.86
LTN1-202ENST00000389194 MUC7Q8TAX7 377 aa3.44□□□□□ -1.86
LTN1-202ENST00000389194 C6orf48Q9UBA6 75 aa3.44□□□□□ -1.86
LTN1-202ENST00000389194 FAM240AA0A1B0GVK7 77 aa3.44□□□□□ -1.86
LTN1-202ENST00000389194 LAMA5O15230 3695 aa3.44□□□□□ -1.86
LTN1-202ENST00000389194 A0A0G2JQZ4 141 aa3.44□□□□□ -1.86
LTN1-202ENST00000389194 A0A1W2PNN7 141 aa3.44□□□□□ -1.86
LTN1-202ENST00000389194 IGLV5-39A0A0G2JS06 123 aa3.44□□□□□ -1.86
LTN1-202ENST00000389194 FHL3Q13643 280 aa3.44□□□□□ -1.86
LTN1-202ENST00000389194 CHTF8P0CG12 524 aa3.43□□□□□ -1.86
LTN1-202ENST00000389194 CRYBG3Q68DQ2 2970 aa3.43□□□□□ -1.86
LTN1-202ENST00000389194 ST20-AS1Q8NBB2 130 aa3.43□□□□□ -1.86
LTN1-202ENST00000389194 C22orf24Q9Y442 160 aa3.43□□□□□ -1.86
LTN1-202ENST00000389194 TRAV7A0A075B6U4 112 aa3.43□□□□□ -1.86
LTN1-202ENST00000389194 A0A1B0GUV1 79 aa3.43□□□□□ -1.86
LTN1-202ENST00000389194 SEC61GP60059 68 aa3.43□□□□□ -1.86
LTN1-202ENST00000389194 FAM168BA1KXE4 195 aa3.43□□□□□ -1.86
LTN1-202ENST00000389194 C7orf33Q8WU49 177 aa3.43□□□□□ -1.86
LTN1-202ENST00000389194 PRR15LQ9BU68 103 aa3.43□□□□□ -1.86
LTN1-202ENST00000389194 FLNCQ14315 2725 aa3.43□□□□□ -1.86
LTN1-202ENST00000389194 SPATA3Q8NHX4 192 aa3.42□□□□□ -1.86
LTN1-202ENST00000389194 SMIM29Q86T20 159 aa3.42□□□□□ -1.86
LTN1-202ENST00000389194 RELNP78509 3460 aa3.42□□□□□ -1.86
LTN1-202ENST00000389194 RPL37AP61513 92 aaKnown RBP3.42□□□□□ -1.86
LTN1-202ENST00000389194 LINC01546A6NGU7 62 aa3.42□□□□□ -1.86
LTN1-202ENST00000389194 PRYO14603 147 aa3.42□□□□□ -1.86
LTN1-202ENST00000389194 C4orf26Q17RF5 130 aa3.42□□□□□ -1.86
LTN1-202ENST00000389194 SMCR5Q8TEV8 140 aa3.42□□□□□ -1.86
LTN1-202ENST00000389194 CR1P17927 2039 aa3.41□□□□□ -1.86
LTN1-202ENST00000389194 CUBNO60494 3623 aa3.41□□□□□ -1.86
LTN1-202ENST00000389194 IGLV5-52A0A0A0MRZ9 124 aa3.41□□□□□ -1.86
LTN1-202ENST00000389194 CRYGAP11844 174 aa3.41□□□□□ -1.86
LTN1-202ENST00000389194 LINC00167Q96N53 147 aa3.41□□□□□ -1.86
LTN1-202ENST00000389194 C16orf95Q9H693 158 aa3.41□□□□□ -1.86
LTN1-202ENST00000389194 UTP20O75691 2785 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms