RNA–Protein interactions for RNA: ENST00000389103.4

UBE3C-202, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 5 BASIC

Gene UBE3C, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-202ENST00000389103 IGKV2-28A0A075B6P5 120 aa8.39□□□□□ -1.07
UBE3C-202ENST00000389103 IGKV2D-28P01615 120 aa8.39□□□□□ -1.07
UBE3C-202ENST00000389103 RPL13AP40429 203 aaKnown RBP8.39□□□□□ -1.07
UBE3C-202ENST00000389103 IFI27L1Q96BM0 104 aa8.39□□□□□ -1.07
UBE3C-202ENST00000389103 RNF213Q63HN8 5207 aa8.38□□□□□ -1.07
UBE3C-202ENST00000389103 TMEM223A0PJW6 202 aa8.38□□□□□ -1.07
UBE3C-202ENST00000389103 VPREB1P12018 145 aa8.38□□□□□ -1.07
UBE3C-202ENST00000389103 COX17Q14061 63 aa8.38□□□□□ -1.07
UBE3C-202ENST00000389103 Q8NDZ9 215 aa8.38□□□□□ -1.07
UBE3C-202ENST00000389103 TRAV12-1A0A0B4J245 112 aa8.37□□□□□ -1.07
UBE3C-202ENST00000389103 A0A1B0GV90 55 aa8.37□□□□□ -1.07
UBE3C-202ENST00000389103 KRTAP13-1Q8IUC0 172 aa8.37□□□□□ -1.07
UBE3C-202ENST00000389103 FAM19A2Q8N3H0 131 aa8.37□□□□□ -1.07
UBE3C-202ENST00000389103 A0A087X002 238 aa8.36□□□□□ -1.07
UBE3C-202ENST00000389103 TRGC2P03986 189 aa8.36□□□□□ -1.07
UBE3C-202ENST00000389103 SFTA2Q6UW10 78 aa8.36□□□□□ -1.07
UBE3C-202ENST00000389103 C14orf144Q96I85 54 aa8.36□□□□□ -1.07
UBE3C-202ENST00000389103 HSBP1O75506 76 aa8.35□□□□□ -1.07
UBE3C-202ENST00000389103 UBE2AP49459 152 aa8.35□□□□□ -1.07
UBE3C-202ENST00000389103 A0A0U1RRA0 63 aa8.34□□□□□ -1.07
UBE3C-202ENST00000389103 SNRPEP62304 92 aaKnown RBP8.34□□□□□ -1.07
UBE3C-202ENST00000389103 C21orf62-AS1Q17RA5 79 aa8.34□□□□□ -1.07
UBE3C-202ENST00000389103 ANAPC11Q9NYG5 84 aa8.34□□□□□ -1.07
UBE3C-202ENST00000389103 TMEM238C9JI98 176 aa8.33□□□□□ -1.08
UBE3C-202ENST00000389103 LINC00158P58513 81 aa8.33□□□□□ -1.08
UBE3C-202ENST00000389103 LINC00310P59036 64 aa8.33□□□□□ -1.08
UBE3C-202ENST00000389103 RPL24P83731 157 aaKnown RBP8.33□□□□□ -1.08
UBE3C-202ENST00000389103 TMEM126AQ9H061 195 aa8.33□□□□□ -1.08
UBE3C-202ENST00000389103 PRLHP81277 87 aa8.32□□□□□ -1.08
UBE3C-202ENST00000389103 LPAP08519 4548 aa8.32□□□□□ -1.08
UBE3C-202ENST00000389103 H0Y8G0 127 aa8.32□□□□□ -1.08
UBE3C-202ENST00000389103 M0R378 163 aa8.31□□□□□ -1.08
UBE3C-202ENST00000389103 SERF1AO75920 110 aa8.31□□□□□ -1.08
UBE3C-202ENST00000389103 CRYGAP11844 174 aa8.31□□□□□ -1.08
UBE3C-202ENST00000389103 FAM19A1Q7Z5A9 133 aa8.31□□□□□ -1.08
UBE3C-202ENST00000389103 SMIM13P0DJ93 91 aa8.3□□□□□ -1.08
UBE3C-202ENST00000389103 TYMSOSQ8TAI1 123 aa8.29□□□□□ -1.08
UBE3C-202ENST00000389103 COLCA2A8K830 154 aa8.29□□□□□ -1.08
UBE3C-202ENST00000389103 LEPROTL1O95214 131 aa8.29□□□□□ -1.08
UBE3C-202ENST00000389103 TSPAN13O95857 204 aa8.29□□□□□ -1.08
UBE3C-202ENST00000389103 KRTAP13-2Q52LG2 175 aa8.29□□□□□ -1.08
UBE3C-202ENST00000389103 PRR4Q16378 134 aa8.28□□□□□ -1.08
UBE3C-202ENST00000389103 MEIG1Q5JSS6 88 aa8.28□□□□□ -1.08
UBE3C-202ENST00000389103 TSPEAR-AS2P59090 65 aa8.27□□□□□ -1.09
UBE3C-202ENST00000389103 MIR7-3HGQ8N6C7 128 aa8.27□□□□□ -1.09
UBE3C-202ENST00000389103 NDUFA12Q9UI09 145 aa8.27□□□□□ -1.09
UBE3C-202ENST00000389103 FABP4P15090 132 aa8.26□□□□□ -1.09
UBE3C-202ENST00000389103 HERV-K104P63124 156 aa8.26□□□□□ -1.09
UBE3C-202ENST00000389103 DDTP30046 118 aa8.25□□□□□ -1.09
UBE3C-202ENST00000389103 BOD1L2Q8IYS8 172 aa8.25□□□□□ -1.09
UBE3C-202ENST00000389103 PMCHL2Q9BQD1 86 aa8.25□□□□□ -1.09
UBE3C-202ENST00000389103 NCR3O14931 201 aa8.25□□□□□ -1.09
UBE3C-202ENST00000389103 FAM229BQ4G0N7 80 aa8.25□□□□□ -1.09
UBE3C-202ENST00000389103 MYMXA0A1B0GTQ4 84 aa8.24□□□□□ -1.09
UBE3C-202ENST00000389103 TSTD3H0UI37 97 aa8.24□□□□□ -1.09
UBE3C-202ENST00000389103 LEPROTO15243 131 aa8.24□□□□□ -1.09
UBE3C-202ENST00000389103 PLNP26678 52 aa8.24□□□□□ -1.09
UBE3C-202ENST00000389103 PLEKHB2Q96CS7 222 aa8.24□□□□□ -1.09
UBE3C-202ENST00000389103 HSPB8Q9UJY1 196 aa8.24□□□□□ -1.09
UBE3C-202ENST00000389103 HIGD2AQ9BW72 106 aa8.23□□□□□ -1.09
UBE3C-202ENST00000389103 DAND5Q8N907 189 aa8.22□□□□□ -1.09
UBE3C-202ENST00000389103 DPM2O94777 84 aa8.21□□□□□ -1.09
UBE3C-202ENST00000389103 PYY3Q5JQD4 70 aa8.21□□□□□ -1.09
UBE3C-202ENST00000389103 IGKV2D-26A0A0A0MRZ7 120 aa8.21□□□□□ -1.1
UBE3C-202ENST00000389103 A6NJY4 79 aa8.21□□□□□ -1.1
UBE3C-202ENST00000389103 J3QQQ9 107 aa8.21□□□□□ -1.1
UBE3C-202ENST00000389103 S100A2P29034 98 aa8.21□□□□□ -1.1
UBE3C-202ENST00000389103 MAP1LC3CQ9BXW4 147 aa8.21□□□□□ -1.1
UBE3C-202ENST00000389103 PRYO14603 147 aa8.2□□□□□ -1.1
UBE3C-202ENST00000389103 IGKCP01834 107 aa8.2□□□□□ -1.1
UBE3C-202ENST00000389103 LINC00304Q8N9R0 145 aa8.2□□□□□ -1.1
UBE3C-202ENST00000389103 KCNQ1DNQ9H478 68 aa8.2□□□□□ -1.1
UBE3C-202ENST00000389103 SPRR1AP35321 89 aa8.19□□□□□ -1.1
UBE3C-202ENST00000389103 TRBV10-3A0A0K0K1G6 114 aa8.18□□□□□ -1.1
UBE3C-202ENST00000389103 HSBP1L1C9JCN9 74 aa8.18□□□□□ -1.1
UBE3C-202ENST00000389103 DLEU1O43261 78 aa8.18□□□□□ -1.1
UBE3C-202ENST00000389103 HERVK_113P61574 105 aa8.18□□□□□ -1.1
UBE3C-202ENST00000389103 C3orf22Q8N5N4 141 aa8.18□□□□□ -1.1
UBE3C-202ENST00000389103 LOC107984156A0A0G2JMH3 177 aa8.18□□□□□ -1.1
UBE3C-202ENST00000389103 LGALS3P17931 250 aaKnown RBP8.18□□□□□ -1.1
UBE3C-202ENST00000389103 ARL17AQ8IVW1 177 aa8.18□□□□□ -1.1
UBE3C-202ENST00000389103 LINC00337Q8N6G1 96 aa8.18□□□□□ -1.1
UBE3C-202ENST00000389103 SPRR4Q96PI1 79 aa8.18□□□□□ -1.1
UBE3C-202ENST00000389103 RETNLBQ9BQ08 111 aa8.18□□□□□ -1.1
UBE3C-202ENST00000389103 KRTAP4-16G5E9R7 235 aaPredicted RBP8.17□□□□□ -1.1
UBE3C-202ENST00000389103 HIST1H2BKO60814 126 aa8.16□□□□□ -1.1
UBE3C-202ENST00000389103 HIST1H2BJP06899 126 aa8.16□□□□□ -1.1
UBE3C-202ENST00000389103 HIST1H2BOP23527 126 aa8.16□□□□□ -1.1
UBE3C-202ENST00000389103 HIST1H2BBP33778 126 aa8.16□□□□□ -1.1
UBE3C-202ENST00000389103 NMUP48645 174 aa8.16□□□□□ -1.1
UBE3C-202ENST00000389103 HIST1H2BDP58876 126 aa8.16□□□□□ -1.1
UBE3C-202ENST00000389103 HIST1H2BCP62807 126 aa8.16□□□□□ -1.1
UBE3C-202ENST00000389103 HIST2H2BEQ16778 126 aa8.16□□□□□ -1.1
UBE3C-202ENST00000389103 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.16□□□□□ -1.1
UBE3C-202ENST00000389103 HIST1H2BHQ93079 126 aa8.16□□□□□ -1.1
UBE3C-202ENST00000389103 HIST1H2BNQ99877 126 aa8.16□□□□□ -1.1
UBE3C-202ENST00000389103 HIST1H2BMQ99879 126 aa8.16□□□□□ -1.1
UBE3C-202ENST00000389103 ETDCA0A1B0GVM5 59 aa8.15□□□□□ -1.1
UBE3C-202ENST00000389103 SMCR5Q8TEV8 140 aa8.14□□□□□ -1.11
UBE3C-202ENST00000389103 ZNF706Q9Y5V0 76 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms