RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 URB2Q14146 1524 aaKnown RBP-0.4□□□□□ -2.47
RNU6-48P-201ENST00000384161 ERICH3Q5RHP9 1530 aa-0.4□□□□□ -2.47
RNU6-48P-201ENST00000384161 J3QR89 54 aa-0.41□□□□□ -2.48
RNU6-48P-201ENST00000384161 TSPAN19P0C672 248 aa-0.41□□□□□ -2.48
RNU6-48P-201ENST00000384161 IGLC6P0CF74 106 aa-0.41□□□□□ -2.48
RNU6-48P-201ENST00000384161 B2MP61769 119 aa-0.41□□□□□ -2.48
RNU6-48P-201ENST00000384161 DEFB109BQ30KR1 87 aa-0.41□□□□□ -2.48
RNU6-48P-201ENST00000384161 C10orf82Q8WW14 230 aa-0.41□□□□□ -2.48
RNU6-48P-201ENST00000384161 PYDC1Q8WXC3 89 aa-0.41□□□□□ -2.48
RNU6-48P-201ENST00000384161 LINC01600Q96MT4 127 aa-0.41□□□□□ -2.48
RNU6-48P-201ENST00000384161 PSMG3Q9BT73 122 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-48P-201ENST00000384161 CASKIN1Q8WXD9 1431 aa-0.41□□□□□ -2.48
RNU6-48P-201ENST00000384161 NSD3Q9BZ95 1437 aa-0.41□□□□□ -2.48
RNU6-48P-201ENST00000384161 DEPDC5O75140 1603 aa-0.42□□□□□ -2.48
RNU6-48P-201ENST00000384161 ABCC6O95255 1503 aa-0.42□□□□□ -2.48
RNU6-48P-201ENST00000384161 HIST1H1AQ02539 215 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-48P-201ENST00000384161 SCIMPQ6UWF3 145 aa-0.42□□□□□ -2.48
RNU6-48P-201ENST00000384161 BAGE3Q86Y29 109 aa-0.42□□□□□ -2.48
RNU6-48P-201ENST00000384161 FDCSPQ8NFU4 85 aa-0.42□□□□□ -2.48
RNU6-48P-201ENST00000384161 TOGARAM1Q9Y4F4 1720 aa-0.42□□□□□ -2.48
RNU6-48P-201ENST00000384161 MROH1Q8NDA8 1641 aa-0.42□□□□□ -2.48
RNU6-48P-201ENST00000384161 LMO7Q8WWI1 1683 aa-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 ALS2Q96Q42 1657 aa-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 QSER1Q2KHR3 1735 aa-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 TIAM2Q8IVF5 1701 aa-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 XRN1Q8IZH2 1706 aaKnown RBP-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 SAMD9LQ8IVG5 1584 aa-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 PRG4Q92954 1404 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 SCAPERQ9BY12 1400 aa-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 GOLGA4Q13439 2230 aaKnown RBP-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 FAM236AA0A1B0GUQ0 79 aa-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 FAM236BA0A1B0GV22 79 aa-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 FAM92AA1XBS5 289 aa-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 CLPSL1A2RUU4 121 aa-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 Q6ZUT4 128 aa-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 LTN1O94822 1766 aa-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 NCOA2Q15596 1464 aa-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 SPEF2Q9C093 1822 aa-0.43□□□□□ -2.48
RNU6-48P-201ENST00000384161 PRDM2Q13029 1718 aa-0.44□□□□□ -2.48
RNU6-48P-201ENST00000384161 LRRIQ1Q96JM4 1722 aa-0.44□□□□□ -2.48
RNU6-48P-201ENST00000384161 PLXNC1O60486 1568 aa-0.44□□□□□ -2.48
RNU6-48P-201ENST00000384161 INO80Q9ULG1 1556 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-48P-201ENST00000384161 TRAV22A0A0B4J277 110 aa-0.44□□□□□ -2.48
RNU6-48P-201ENST00000384161 MT1EP04732 61 aa-0.44□□□□□ -2.48
RNU6-48P-201ENST00000384161 IL5P05113 134 aa-0.44□□□□□ -2.48
RNU6-48P-201ENST00000384161 CBLN1P23435 193 aa-0.44□□□□□ -2.48
RNU6-48P-201ENST00000384161 RRAS2P62070 204 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-48P-201ENST00000384161 UBE2G1P62253 170 aa-0.44□□□□□ -2.48
RNU6-48P-201ENST00000384161 SPCS1Q9Y6A9 102 aa-0.44□□□□□ -2.48
RNU6-48P-201ENST00000384161 ATP7AQ04656 1500 aa-0.44□□□□□ -2.48
RNU6-48P-201ENST00000384161 RGPD3A6NKT7 1758 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-48P-201ENST00000384161 RGPD4Q7Z3J3 1758 aa-0.45□□□□□ -2.48
RNU6-48P-201ENST00000384161 ABCA5Q8WWZ7 1642 aa-0.45□□□□□ -2.48
RNU6-48P-201ENST00000384161 IFT140Q96RY7 1462 aa-0.45□□□□□ -2.48
RNU6-48P-201ENST00000384161 M0R129 80 aa-0.45□□□□□ -2.48
RNU6-48P-201ENST00000384161 M0R2Z0 102 aa-0.45□□□□□ -2.48
RNU6-48P-201ENST00000384161 SPTSSAQ969W0 71 aa-0.45□□□□□ -2.48
RNU6-48P-201ENST00000384161 SMIM3Q9BZL3 60 aa-0.45□□□□□ -2.48
RNU6-48P-201ENST00000384161 ABCC1P33527 1531 aa-0.45□□□□□ -2.48
RNU6-48P-201ENST00000384161 ARHGAP5Q13017 1502 aa-0.45□□□□□ -2.48
RNU6-48P-201ENST00000384161 LMTK2Q8IWU2 1503 aa-0.45□□□□□ -2.48
RNU6-48P-201ENST00000384161 CNTLNQ9NXG0 1405 aa-0.46□□□□□ -2.48
RNU6-48P-201ENST00000384161 MON2Q7Z3U7 1717 aa-0.46□□□□□ -2.48
RNU6-48P-201ENST00000384161 PITX3O75364 302 aa-0.46□□□□□ -2.48
RNU6-48P-201ENST00000384161 LINC00694P0DN24 101 aa-0.46□□□□□ -2.48
RNU6-48P-201ENST00000384161 CKS1BP61024 79 aa-0.46□□□□□ -2.48
RNU6-48P-201ENST00000384161 CCL8P80075 99 aa-0.46□□□□□ -2.48
RNU6-48P-201ENST00000384161 CFAP126Q5VTH2 177 aa-0.46□□□□□ -2.48
RNU6-48P-201ENST00000384161 Q8IZM0 81 aa-0.46□□□□□ -2.48
RNU6-48P-201ENST00000384161 CDC42BPGQ6DT37 1551 aa-0.46□□□□□ -2.48
RNU6-48P-201ENST00000384161 CEP152O94986 1710 aa-0.47□□□□□ -2.48
RNU6-48P-201ENST00000384161 NPFFO15130 113 aa-0.47□□□□□ -2.48
RNU6-48P-201ENST00000384161 SNCGO76070 127 aa-0.47□□□□□ -2.48
RNU6-48P-201ENST00000384161 NDUFB6O95139 128 aa-0.47□□□□□ -2.48
RNU6-48P-201ENST00000384161 MT1AP04731 61 aa-0.47□□□□□ -2.48
RNU6-48P-201ENST00000384161 S100A3P33764 101 aa-0.47□□□□□ -2.48
RNU6-48P-201ENST00000384161 GUCA1AP43080 201 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-48P-201ENST00000384161 DEFA5Q01523 94 aa-0.47□□□□□ -2.48
RNU6-48P-201ENST00000384161 DR1Q01658 176 aa-0.47□□□□□ -2.48
RNU6-48P-201ENST00000384161 ALX1Q15699 326 aa-0.47□□□□□ -2.48
RNU6-48P-201ENST00000384161 AKAP14Q86UN6 197 aa-0.47□□□□□ -2.48
RNU6-48P-201ENST00000384161 SPTSSBQ8NFR3 76 aa-0.47□□□□□ -2.48
RNU6-48P-201ENST00000384161 LZICQ8WZA0 190 aa-0.47□□□□□ -2.48
RNU6-48P-201ENST00000384161 SCN3BQ9NY72 215 aa-0.47□□□□□ -2.48
RNU6-48P-201ENST00000384161 NRAPQ86VF7 1730 aa-0.47□□□□□ -2.49
RNU6-48P-201ENST00000384161 PI4KAP42356 2102 aa-0.47□□□□□ -2.49
RNU6-48P-201ENST00000384161 DOCK2Q92608 1830 aa-0.48□□□□□ -2.49
RNU6-48P-201ENST00000384161 ZNF518AQ6AHZ1 1483 aa-0.48□□□□□ -2.49
RNU6-48P-201ENST00000384161 TRPM2O94759 1503 aa-0.48□□□□□ -2.49
RNU6-48P-201ENST00000384161 UBA52P62987 128 aaKnown RBP-0.48□□□□□ -2.49
RNU6-48P-201ENST00000384161 NPVFQ9HCQ7 196 aa-0.48□□□□□ -2.49
RNU6-48P-201ENST00000384161 LINC00312Q9Y6C7 94 aa-0.48□□□□□ -2.49
RNU6-48P-201ENST00000384161 DDX60LQ5H9U9 1706 aaKnown RBP-0.48□□□□□ -2.49
RNU6-48P-201ENST00000384161 UACAQ9BZF9 1416 aa-0.48□□□□□ -2.49
RNU6-48P-201ENST00000384161 CLTCQ00610 1675 aaKnown RBP-0.49□□□□□ -2.49
RNU6-48P-201ENST00000384161 SCN7AQ01118 1682 aa-0.49□□□□□ -2.49
RNU6-48P-201ENST00000384161 K7ERU9 68 aa-0.49□□□□□ -2.49
RNU6-48P-201ENST00000384161 CCL18P55774 89 aa-0.49□□□□□ -2.49
RNU6-48P-201ENST00000384161 SMIM4Q8WVI0 70 aa-0.49□□□□□ -2.49
RNU6-48P-201ENST00000384161 TCEAL4Q96EI5 215 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms