RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 LINC00337Q8N6G1 96 aa9.77□□□□□ -0.84
CLCN4-201ENST00000380829 DNAH3Q8TD57 4116 aa9.77□□□□□ -0.84
CLCN4-201ENST00000380829 NBEAL1Q6ZS30 2694 aa9.77□□□□□ -0.85
CLCN4-201ENST00000380829 A0A087WZ39 114 aa9.77□□□□□ -0.85
CLCN4-201ENST00000380829 ANGP03950 147 aaKnown RBP9.76□□□□□ -0.85
CLCN4-201ENST00000380829 SS18Q15532 418 aa9.76□□□□□ -0.85
CLCN4-201ENST00000380829 CRPP02741 224 aa9.75□□□□□ -0.85
CLCN4-201ENST00000380829 PRB2P02812 416 aaPredicted RBP9.75□□□□□ -0.85
CLCN4-201ENST00000380829 SLPIP03973 132 aa9.75□□□□□ -0.85
CLCN4-201ENST00000380829 TENM3Q9P273 2699 aa9.75□□□□□ -0.85
CLCN4-201ENST00000380829 IGLV10-54A0A075B6I4 117 aa9.74□□□□□ -0.85
CLCN4-201ENST00000380829 RPL28P46779 137 aaKnown RBP9.74□□□□□ -0.85
CLCN4-201ENST00000380829 C11orf68Q9H3H3 251 aaKnown RBP9.74□□□□□ -0.85
CLCN4-201ENST00000380829 TRAV23DV6A0A075B6W5 121 aa9.74□□□□□ -0.85
CLCN4-201ENST00000380829 Q6ZTC4 211 aa9.74□□□□□ -0.85
CLCN4-201ENST00000380829 IGKV2-28A0A075B6P5 120 aa9.73□□□□□ -0.85
CLCN4-201ENST00000380829 LECT2O14960 151 aa9.73□□□□□ -0.85
CLCN4-201ENST00000380829 GHRHP01286 108 aa9.73□□□□□ -0.85
CLCN4-201ENST00000380829 IGKV2D-28P01615 120 aa9.73□□□□□ -0.85
CLCN4-201ENST00000380829 SMIM11BQ8TCY0 68 aa9.73□□□□□ -0.85
CLCN4-201ENST00000380829 COPS9Q8WXC6 57 aa9.73□□□□□ -0.85
CLCN4-201ENST00000380829 REG3AQ06141 175 aa9.73□□□□□ -0.85
CLCN4-201ENST00000380829 LELP1Q5T871 98 aa9.73□□□□□ -0.85
CLCN4-201ENST00000380829 A0A0J9YWU9 116 aa9.72□□□□□ -0.85
CLCN4-201ENST00000380829 MGAM2Q2M2H8 2515 aa9.71□□□□□ -0.85
CLCN4-201ENST00000380829 PFN2P35080 140 aa9.71□□□□□ -0.85
CLCN4-201ENST00000380829 C20orf197Q8N268 126 aa9.71□□□□□ -0.85
CLCN4-201ENST00000380829 CHCHD10Q8WYQ3 142 aaPredicted RBP9.71□□□□□ -0.85
CLCN4-201ENST00000380829 TRAV13-2A0A0B4J235 113 aa9.71□□□□□ -0.86
CLCN4-201ENST00000380829 MIR7-3HGQ8N6C7 128 aa9.71□□□□□ -0.86
CLCN4-201ENST00000380829 OBSCN-AS1Q96MR7 158 aa9.71□□□□□ -0.86
CLCN4-201ENST00000380829 LYPD5Q6UWN5 251 aa9.7□□□□□ -0.86
CLCN4-201ENST00000380829 FAM19A1Q7Z5A9 133 aa9.7□□□□□ -0.86
CLCN4-201ENST00000380829 SND1-IT1Q9HBX3 110 aa9.7□□□□□ -0.86
CLCN4-201ENST00000380829 C6orf226Q5I0X4 101 aa9.7□□□□□ -0.86
CLCN4-201ENST00000380829 KPRPQ5T749 579 aaPredicted RBP9.7□□□□□ -0.86
CLCN4-201ENST00000380829 LINC00336Q6ZUF6 198 aa9.7□□□□□ -0.86
CLCN4-201ENST00000380829 NANOS2P60321 138 aaKnown RBP9.69□□□□□ -0.86
CLCN4-201ENST00000380829 LINC00158P58513 81 aa9.68□□□□□ -0.86
CLCN4-201ENST00000380829 CD164L2Q6UWJ8 174 aa9.68□□□□□ -0.86
CLCN4-201ENST00000380829 SEC61GP60059 68 aa9.68□□□□□ -0.86
CLCN4-201ENST00000380829 KLK12Q9UKR0 248 aa9.68□□□□□ -0.86
CLCN4-201ENST00000380829 FAM236DA0A1B0GTK5 79 aa9.67□□□□□ -0.86
CLCN4-201ENST00000380829 FAM236CP0DP71 79 aa9.67□□□□□ -0.86
CLCN4-201ENST00000380829 PRO0628Q9UI54 55 aa9.67□□□□□ -0.86
CLCN4-201ENST00000380829 ENHOQ6UWT2 76 aa9.67□□□□□ -0.86
CLCN4-201ENST00000380829 Q8IZM0 81 aa9.66□□□□□ -0.86
CLCN4-201ENST00000380829 C11orf45Q8TAV5 145 aa9.66□□□□□ -0.86
CLCN4-201ENST00000380829 IBA57-AS1B1ANH7 110 aa9.65□□□□□ -0.86
CLCN4-201ENST00000380829 NDUFC2O95298 119 aa9.65□□□□□ -0.86
CLCN4-201ENST00000380829 WFDC10BQ8IUB3 73 aa9.65□□□□□ -0.86
CLCN4-201ENST00000380829 H3BNG1 76 aa9.64□□□□□ -0.87
CLCN4-201ENST00000380829 C1orf43Q9BWL3 253 aa9.64□□□□□ -0.87
CLCN4-201ENST00000380829 DEFB131BA0A096LNP1 70 aa9.64□□□□□ -0.87
CLCN4-201ENST00000380829 CCKP06307 115 aa9.63□□□□□ -0.87
CLCN4-201ENST00000380829 PRR34Q9NV39 138 aa9.63□□□□□ -0.87
CLCN4-201ENST00000380829 K7EIL1 84 aa9.63□□□□□ -0.87
CLCN4-201ENST00000380829 CCL18P55774 89 aa9.63□□□□□ -0.87
CLCN4-201ENST00000380829 KIAA0087Q14695 138 aa9.63□□□□□ -0.87
CLCN4-201ENST00000380829 PKIGQ9Y2B9 76 aa9.63□□□□□ -0.87
CLCN4-201ENST00000380829 NDUFC2-KCTD14E9PQ53 114 aa9.62□□□□□ -0.87
CLCN4-201ENST00000380829 KRTAP21-3Q3LHN1 58 aa9.62□□□□□ -0.87
CLCN4-201ENST00000380829 H0YGX0 51 aa9.62□□□□□ -0.87
CLCN4-201ENST00000380829 ORMDL1Q9P0S3 153 aa9.62□□□□□ -0.87
CLCN4-201ENST00000380829 H7BZZ5 65 aa9.61□□□□□ -0.87
CLCN4-201ENST00000380829 ESRGQ1W209 222 aa9.61□□□□□ -0.87
CLCN4-201ENST00000380829 HUWE1Q7Z6Z7 4374 aaKnown RBP9.59□□□□□ -0.87
CLCN4-201ENST00000380829 C9orf116Q5BN46 136 aaPredicted RBP9.59□□□□□ -0.87
CLCN4-201ENST00000380829 SNURFQ9Y675 71 aa9.59□□□□□ -0.87
CLCN4-201ENST00000380829 C6orf223Q8N319 242 aa9.58□□□□□ -0.88
CLCN4-201ENST00000380829 SERP1Q9Y6X1 66 aa9.58□□□□□ -0.88
CLCN4-201ENST00000380829 EPM2AB3EWF7 344 aa9.58□□□□□ -0.88
CLCN4-201ENST00000380829 TM2D3Q9BRN9 247 aa9.58□□□□□ -0.88
CLCN4-201ENST00000380829 SPAG11BQ08648 103 aa9.57□□□□□ -0.88
CLCN4-201ENST00000380829 FP248Q71RG6 208 aaPredicted RBP9.57□□□□□ -0.88
CLCN4-201ENST00000380829 MDFIQ99750 246 aa9.57□□□□□ -0.88
CLCN4-201ENST00000380829 RMI2Q96E14 147 aa9.56□□□□□ -0.88
CLCN4-201ENST00000380829 S100A7L2Q5SY68 101 aa9.56□□□□□ -0.88
CLCN4-201ENST00000380829 C10orf25Q5T742 122 aa9.56□□□□□ -0.88
CLCN4-201ENST00000380829 ATP5EP2Q5VTU8 51 aa9.56□□□□□ -0.88
CLCN4-201ENST00000380829 UNQ6190/PRO20217Q6UXQ8 127 aa9.55□□□□□ -0.88
CLCN4-201ENST00000380829 DNHD1Q96M86 4753 aa9.55□□□□□ -0.88
CLCN4-201ENST00000380829 V9GYY9 64 aa9.54□□□□□ -0.88
CLCN4-201ENST00000380829 LINC00474Q9P2X8 69 aa9.54□□□□□ -0.88
CLCN4-201ENST00000380829 UBL5Q9BZL1 73 aa9.53□□□□□ -0.88
CLCN4-201ENST00000380829 TRAV10A0A0B4J240 114 aa9.53□□□□□ -0.88
CLCN4-201ENST00000380829 F8WEM9 126 aa9.53□□□□□ -0.88
CLCN4-201ENST00000380829 PRR3P79522 188 aaKnown RBP9.52□□□□□ -0.89
CLCN4-201ENST00000380829 COX17Q14061 63 aa9.52□□□□□ -0.89
CLCN4-201ENST00000380829 JMJD7-PLA2G4BH0Y9G9 81 aa9.51□□□□□ -0.89
CLCN4-201ENST00000380829 TRAV7A0A075B6U4 112 aa9.51□□□□□ -0.89
CLCN4-201ENST00000380829 A0A0U1RQV1 116 aa9.51□□□□□ -0.89
CLCN4-201ENST00000380829 M0R2N4 97 aa9.51□□□□□ -0.89
CLCN4-201ENST00000380829 LINC01556Q5JQF7 62 aa9.51□□□□□ -0.89
CLCN4-201ENST00000380829 Q8N814 137 aa9.51□□□□□ -0.89
CLCN4-201ENST00000380829 HIGD2BQ4VC39 106 aa9.5□□□□□ -0.89
CLCN4-201ENST00000380829 KRTAP26-1Q6PEX3 210 aa9.5□□□□□ -0.89
CLCN4-201ENST00000380829 KLKP1Q107X0 134 aa9.49□□□□□ -0.89
CLCN4-201ENST00000380829 BRK1Q8WUW1 75 aa9.49□□□□□ -0.89
CLCN4-201ENST00000380829 LINC00167Q96N53 147 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms