RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 PRO0255Q9UI72 69 aa7.52□□□□□ -1.21
NEDD9-201ENST00000379433 IGHV3-30P01768 117 aa7.52□□□□□ -1.21
NEDD9-201ENST00000379433 ANGP03950 147 aaKnown RBP7.52□□□□□ -1.21
NEDD9-201ENST00000379433 CFC1BP0CG36 223 aa7.52□□□□□ -1.21
NEDD9-201ENST00000379433 CFC1P0CG37 223 aa7.52□□□□□ -1.21
NEDD9-201ENST00000379433 IGHV3-30-5P0DP03 117 aa7.52□□□□□ -1.21
NEDD9-201ENST00000379433 A8MUN3 132 aa7.52□□□□□ -1.21
NEDD9-201ENST00000379433 EPM2AB3EWF7 344 aa7.52□□□□□ -1.21
NEDD9-201ENST00000379433 LINC00643Q86TS7 51 aa7.52□□□□□ -1.21
NEDD9-201ENST00000379433 GHRHP01286 108 aa7.51□□□□□ -1.21
NEDD9-201ENST00000379433 PRYO14603 147 aa7.51□□□□□ -1.21
NEDD9-201ENST00000379433 LINC00269Q8N2A0 174 aa7.5□□□□□ -1.21
NEDD9-201ENST00000379433 TENM2Q9NT68 2774 aa7.5□□□□□ -1.21
NEDD9-201ENST00000379433 CCKP06307 115 aa7.5□□□□□ -1.21
NEDD9-201ENST00000379433 C20orf197Q8N268 126 aa7.5□□□□□ -1.21
NEDD9-201ENST00000379433 NDUFS5O43920 106 aa7.49□□□□□ -1.21
NEDD9-201ENST00000379433 SPART-AS1P0CW21 52 aa7.49□□□□□ -1.21
NEDD9-201ENST00000379433 SMIM1B2RUZ4 78 aa7.49□□□□□ -1.21
NEDD9-201ENST00000379433 IGHV3-33P01772 117 aa7.49□□□□□ -1.21
NEDD9-201ENST00000379433 C2orf82Q6UX34 121 aa7.48□□□□□ -1.21
NEDD9-201ENST00000379433 Q8NAQ8 132 aa7.48□□□□□ -1.21
NEDD9-201ENST00000379433 PRO1854Q9UHT4 67 aa7.48□□□□□ -1.21
NEDD9-201ENST00000379433 LST1O00453 97 aa7.47□□□□□ -1.21
NEDD9-201ENST00000379433 LINC00158P58513 81 aa7.47□□□□□ -1.21
NEDD9-201ENST00000379433 WFDC9Q8NEX5 89 aa7.47□□□□□ -1.21
NEDD9-201ENST00000379433 Q6ZTC4 211 aa7.47□□□□□ -1.21
NEDD9-201ENST00000379433 KLK12Q9UKR0 248 aa7.46□□□□□ -1.21
NEDD9-201ENST00000379433 NANOS2P60321 138 aaKnown RBP7.46□□□□□ -1.22
NEDD9-201ENST00000379433 REG3AQ06141 175 aa7.46□□□□□ -1.22
NEDD9-201ENST00000379433 ZNF706Q9Y5V0 76 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-201ENST00000379433 A0A0J9YWU9 116 aa7.45□□□□□ -1.22
NEDD9-201ENST00000379433 FUSP35637 526 aaKnown RBP eCLIP7.45□□□□□ -1.221e-8■■■□□ 15.2
NEDD9-201ENST00000379433 ACYP1P07311 99 aa7.44□□□□□ -1.22
NEDD9-201ENST00000379433 LINC00959A0A1B0GUT2 108 aa7.44□□□□□ -1.22
NEDD9-201ENST00000379433 COX7A2LO14548 114 aa7.44□□□□□ -1.22
NEDD9-201ENST00000379433 MIFP14174 115 aa7.44□□□□□ -1.22
NEDD9-201ENST00000379433 LITAFQ99732 161 aa7.44□□□□□ -1.22
NEDD9-201ENST00000379433 A0A087WZ39 114 aa7.43□□□□□ -1.22
NEDD9-201ENST00000379433 COX7B2Q8TF08 81 aa7.43□□□□□ -1.22
NEDD9-201ENST00000379433 MIR7-3HGQ8N6C7 128 aa7.43□□□□□ -1.22
NEDD9-201ENST00000379433 CLEC2BQ92478 149 aa7.43□□□□□ -1.22
NEDD9-201ENST00000379433 MIAQ16674 131 aa7.42□□□□□ -1.22
NEDD9-201ENST00000379433 C9orf116Q5BN46 136 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-201ENST00000379433 SPTSSBQ8NFR3 76 aa7.42□□□□□ -1.22
NEDD9-201ENST00000379433 LCA10Q71F78 164 aa7.41□□□□□ -1.22
NEDD9-201ENST00000379433 CSMD3Q7Z407 3707 aa7.41□□□□□ -1.22
NEDD9-201ENST00000379433 NDUFA1O15239 70 aa7.41□□□□□ -1.22
NEDD9-201ENST00000379433 ATXN8Q156A1 80 aa7.41□□□□□ -1.22
NEDD9-201ENST00000379433 LINC00308Q8TCZ7 52 aa7.4□□□□□ -1.22
NEDD9-201ENST00000379433 IGHV3OR16-9A0A0B4J2B5 98 aa7.4□□□□□ -1.22
NEDD9-201ENST00000379433 TRBV10-2A0A0K0K1G8 114 aa7.4□□□□□ -1.22
NEDD9-201ENST00000379433 CHCHD10Q8WYQ3 142 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-201ENST00000379433 ICOSQ9Y6W8 199 aa7.4□□□□□ -1.22
NEDD9-201ENST00000379433 TRIAP1O43715 76 aa7.4□□□□□ -1.23
NEDD9-201ENST00000379433 MP68P56378 58 aa7.4□□□□□ -1.23
NEDD9-201ENST00000379433 HIST1H4AP62805 103 aaKnown RBP7.4□□□□□ -1.23
NEDD9-201ENST00000379433 PRR3P79522 188 aaKnown RBP7.4□□□□□ -1.23
NEDD9-201ENST00000379433 KPRPQ5T749 579 aaPredicted RBP7.4□□□□□ -1.23
NEDD9-201ENST00000379433 LYPD5Q6UWN5 251 aa7.4□□□□□ -1.23
NEDD9-201ENST00000379433 WFDC10BQ8IUB3 73 aa7.39□□□□□ -1.23
NEDD9-201ENST00000379433 Q9HAA7 133 aa7.39□□□□□ -1.23
NEDD9-201ENST00000379433 LINC00588Q9Y4M8 146 aa7.39□□□□□ -1.23
NEDD9-201ENST00000379433 IGLV5-45A0A087WSX0 123 aa7.39□□□□□ -1.23
NEDD9-201ENST00000379433 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-201ENST00000379433 IGLV5-39A0A0G2JS06 123 aa7.39□□□□□ -1.23
NEDD9-201ENST00000379433 SDIM1Q6ZPB5 146 aa7.39□□□□□ -1.23
NEDD9-201ENST00000379433 Q6ZVQ6 151 aa7.39□□□□□ -1.23
NEDD9-201ENST00000379433 LINC00612Q8N6U2 182 aa7.39□□□□□ -1.23
NEDD9-201ENST00000379433 NKAPP1Q8N9T2 125 aa7.39□□□□□ -1.23
NEDD9-201ENST00000379433 A0A0B4J2C4 111 aa7.38□□□□□ -1.23
NEDD9-201ENST00000379433 LINC00313P59037 77 aa7.38□□□□□ -1.23
NEDD9-201ENST00000379433 SMCR5Q8TEV8 140 aa7.37□□□□□ -1.23
NEDD9-201ENST00000379433 DEFB131BA0A096LNP1 70 aa7.37□□□□□ -1.23
NEDD9-201ENST00000379433 CRPP02741 224 aa7.37□□□□□ -1.23
NEDD9-201ENST00000379433 HIGD2BQ4VC39 106 aa7.37□□□□□ -1.23
NEDD9-201ENST00000379433 H7BZZ5 65 aa7.36□□□□□ -1.23
NEDD9-201ENST00000379433 SND1-IT1Q9HBX3 110 aa7.36□□□□□ -1.23
NEDD9-201ENST00000379433 COL7A1Q02388 2944 aa7.36□□□□□ -1.23
NEDD9-201ENST00000379433 UBE2BP63146 152 aa7.35□□□□□ -1.23
NEDD9-201ENST00000379433 A0A087WVE0 104 aa7.35□□□□□ -1.23
NEDD9-201ENST00000379433 IGKV3D-7A0A0C4DH55 119 aa7.35□□□□□ -1.23
NEDD9-201ENST00000379433 H7C423 109 aa7.35□□□□□ -1.23
NEDD9-201ENST00000379433 F8WEM9 126 aa7.34□□□□□ -1.23
NEDD9-201ENST00000379433 COX6CP09669 75 aa7.34□□□□□ -1.23
NEDD9-201ENST00000379433 C6orf99Q4VX62 202 aa7.34□□□□□ -1.23
NEDD9-201ENST00000379433 UNQ6190/PRO20217Q6UXQ8 127 aa7.33□□□□□ -1.24
NEDD9-201ENST00000379433 C10orf25Q5T742 122 aa7.33□□□□□ -1.24
NEDD9-201ENST00000379433 J3QL48 77 aa7.32□□□□□ -1.24
NEDD9-201ENST00000379433 CCL18P55774 89 aa7.32□□□□□ -1.24
NEDD9-201ENST00000379433 ESRGQ1W209 222 aa7.32□□□□□ -1.24
NEDD9-201ENST00000379433 LELP1Q5T871 98 aa7.32□□□□□ -1.24
NEDD9-201ENST00000379433 IGKV2D-24A0A075B6R9 120 aa7.32□□□□□ -1.24
NEDD9-201ENST00000379433 A0A1B0GUV1 79 aa7.32□□□□□ -1.24
NEDD9-201ENST00000379433 FAM229BQ4G0N7 80 aa7.32□□□□□ -1.24
NEDD9-201ENST00000379433 LINC00337Q8N6G1 96 aa7.32□□□□□ -1.24
NEDD9-201ENST00000379433 LECT2O14960 151 aa7.32□□□□□ -1.24
NEDD9-201ENST00000379433 PSPHP1O15172 72 aa7.32□□□□□ -1.24
NEDD9-201ENST00000379433 XAGE1AQ9HD64 81 aa7.32□□□□□ -1.24
NEDD9-201ENST00000379433 SPAG11BQ08648 103 aa7.31□□□□□ -1.24
NEDD9-201ENST00000379433 SNURFQ9Y675 71 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms