RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 LINC01561Q8N1V8 128 aa8.36□□□□□ -1.07
PCDHA9-201ENST00000378122 MYO9AB2RTY4 2548 aa8.36□□□□□ -1.07
PCDHA9-201ENST00000378122 IGLV5-39A0A0G2JS06 123 aa8.36□□□□□ -1.07
PCDHA9-201ENST00000378122 C11orf72Q8NBR9 251 aa8.36□□□□□ -1.07
PCDHA9-201ENST00000378122 SPATA3Q8NHX4 192 aa8.36□□□□□ -1.07
PCDHA9-201ENST00000378122 ANKHD1Q8IWZ3 2542 aaKnown RBP8.35□□□□□ -1.07
PCDHA9-201ENST00000378122 C7orf65Q6ZTY9 151 aa8.35□□□□□ -1.07
PCDHA9-201ENST00000378122 FAM19A4Q96LR4 140 aa8.35□□□□□ -1.07
PCDHA9-201ENST00000378122 TLN1Q9Y490 2541 aaKnown RBP8.34□□□□□ -1.07
PCDHA9-201ENST00000378122 hDV103S1A0JD37 113 aa8.34□□□□□ -1.07
PCDHA9-201ENST00000378122 KIAA0087Q14695 138 aa8.34□□□□□ -1.07
PCDHA9-201ENST00000378122 RTL8CO15255 209 aa8.33□□□□□ -1.08
PCDHA9-201ENST00000378122 LINC00315P59091 139 aa8.33□□□□□ -1.08
PCDHA9-201ENST00000378122 MOBPQ13875 183 aa8.33□□□□□ -1.08
PCDHA9-201ENST00000378122 F8WDY8 70 aa8.33□□□□□ -1.08
PCDHA9-201ENST00000378122 C1orf64Q8NEQ6 169 aa8.33□□□□□ -1.08
PCDHA9-201ENST00000378122 RPL37AP61513 92 aaKnown RBP8.33□□□□□ -1.08
PCDHA9-201ENST00000378122 COL27A1Q8IZC6 1860 aaPredicted RBP8.32□□□□□ -1.08
PCDHA9-201ENST00000378122 C22orf24Q9Y442 160 aa8.31□□□□□ -1.08
PCDHA9-201ENST00000378122 TYMSOSQ8TAI1 123 aa8.3□□□□□ -1.08
PCDHA9-201ENST00000378122 SMCR5Q8TEV8 140 aa8.3□□□□□ -1.08
PCDHA9-201ENST00000378122 LIMD2Q9BT23 127 aa8.29□□□□□ -1.08
PCDHA9-201ENST00000378122 RPS28P62857 69 aaKnown RBP8.29□□□□□ -1.08
PCDHA9-201ENST00000378122 PTPRBP23467 1997 aa8.28□□□□□ -1.08
PCDHA9-201ENST00000378122 PHF5AQ7RTV0 110 aaKnown RBP8.28□□□□□ -1.08
PCDHA9-201ENST00000378122 Q6ZQT0 140 aa8.27□□□□□ -1.08
PCDHA9-201ENST00000378122 C9orf92A6NGG3 77 aa8.27□□□□□ -1.09
PCDHA9-201ENST00000378122 FN1P02751 2386 aaKnown RBP8.27□□□□□ -1.09
PCDHA9-201ENST00000378122 IGHV3OR16-9A0A0B4J2B5 98 aa8.26□□□□□ -1.09
PCDHA9-201ENST00000378122 C6orf48Q9UBA6 75 aa8.26□□□□□ -1.09
PCDHA9-201ENST00000378122 IGLV5-45A0A087WSX0 123 aa8.25□□□□□ -1.09
PCDHA9-201ENST00000378122 BCE1O60756 84 aa8.24□□□□□ -1.09
PCDHA9-201ENST00000378122 COL4A2P08572 1712 aa8.24□□□□□ -1.09
PCDHA9-201ENST00000378122 NBDYA0A0U1RRE5 68 aa8.23□□□□□ -1.09
PCDHA9-201ENST00000378122 TM2D3Q9BRN9 247 aa8.23□□□□□ -1.09
PCDHA9-201ENST00000378122 ELOF1P60002 83 aaKnown RBP8.23□□□□□ -1.09
PCDHA9-201ENST00000378122 LOC110117498A0A087WWA1 95 aa8.22□□□□□ -1.09
PCDHA9-201ENST00000378122 Q96NJ1 140 aa8.22□□□□□ -1.09
PCDHA9-201ENST00000378122 LINC00167Q96N53 147 aa8.22□□□□□ -1.09
PCDHA9-201ENST00000378122 CHD8Q9HCK8 2581 aa8.22□□□□□ -1.09
PCDHA9-201ENST00000378122 SPAG11AQ6PDA7 123 aa8.22□□□□□ -1.09
PCDHA9-201ENST00000378122 A0A1B0GU69 56 aa8.21□□□□□ -1.09
PCDHA9-201ENST00000378122 LITAFQ99732 161 aa8.19□□□□□ -1.1
PCDHA9-201ENST00000378122 LINC01554Q52M75 96 aa8.18□□□□□ -1.1
PCDHA9-201ENST00000378122 TLN2Q9Y4G6 2542 aa8.18□□□□□ -1.1
PCDHA9-201ENST00000378122 PCSK5Q92824 1860 aa8.17□□□□□ -1.1
PCDHA9-201ENST00000378122 F8P00451 2351 aa8.16□□□□□ -1.1
PCDHA9-201ENST00000378122 ACYP2P14621 99 aa8.16□□□□□ -1.1
PCDHA9-201ENST00000378122 ST20-AS1Q8NBB2 130 aa8.16□□□□□ -1.1
PCDHA9-201ENST00000378122 ATP11AUNQ6ZP68 121 aa8.16□□□□□ -1.1
PCDHA9-201ENST00000378122 K7EIL1 84 aa8.15□□□□□ -1.1
PCDHA9-201ENST00000378122 LINC00476Q8WZB0 136 aa8.15□□□□□ -1.1
PCDHA9-201ENST00000378122 TP53AIP1Q9HCN2 124 aa8.15□□□□□ -1.1
PCDHA9-201ENST00000378122 Q6ZRP5 223 aa8.15□□□□□ -1.11
PCDHA9-201ENST00000378122 ACANP16112 2415 aa8.13□□□□□ -1.11
PCDHA9-201ENST00000378122 M0R2T5 61 aa8.13□□□□□ -1.11
PCDHA9-201ENST00000378122 EPM2AB3EWF7 344 aa8.13□□□□□ -1.11
PCDHA9-201ENST00000378122 Q6ZRX8 168 aa8.12□□□□□ -1.11
PCDHA9-201ENST00000378122 DNAH10OSP0CZ25 163 aa8.12□□□□□ -1.11
PCDHA9-201ENST00000378122 KRTAP10-11P60412 298 aa8.12□□□□□ -1.11
PCDHA9-201ENST00000378122 LINC00588Q9Y4M8 146 aa8.11□□□□□ -1.11
PCDHA9-201ENST00000378122 ABCA12Q86UK0 2595 aa8.11□□□□□ -1.11
PCDHA9-201ENST00000378122 Q8NBF4 154 aa8.1□□□□□ -1.11
PCDHA9-201ENST00000378122 FASNP49327 2511 aaKnown RBP8.1□□□□□ -1.11
PCDHA9-201ENST00000378122 A0A1B0GW54 56 aa8.1□□□□□ -1.11
PCDHA9-201ENST00000378122 H3BPC8 53 aa8.1□□□□□ -1.11
PCDHA9-201ENST00000378122 APLNQ9ULZ1 77 aa8.1□□□□□ -1.11
PCDHA9-201ENST00000378122 LINC00313P59037 77 aa8.08□□□□□ -1.12
PCDHA9-201ENST00000378122 FAM168BA1KXE4 195 aa8.08□□□□□ -1.12
PCDHA9-201ENST00000378122 TRAV22A0A0B4J277 110 aa8.07□□□□□ -1.12
PCDHA9-201ENST00000378122 ANAPC11Q9NYG5 84 aa8.06□□□□□ -1.12
PCDHA9-201ENST00000378122 K7EQZ3 153 aa8.06□□□□□ -1.12
PCDHA9-201ENST00000378122 C8orf87E5RJ46 101 aa8.05□□□□□ -1.12
PCDHA9-201ENST00000378122 A8MUN3 132 aa8.05□□□□□ -1.12
PCDHA9-201ENST00000378122 IGLV6-57P01721 117 aa8.05□□□□□ -1.12
PCDHA9-201ENST00000378122 H3BNG1 76 aa8.04□□□□□ -1.12
PCDHA9-201ENST00000378122 SPINT4Q6UDR6 99 aa8.04□□□□□ -1.12
PCDHA9-201ENST00000378122 TRBV7-4A0A0J9YYF1 115 aa8.04□□□□□ -1.12
PCDHA9-201ENST00000378122 EIF4EBP3O60516 100 aaPredicted RBP8.03□□□□□ -1.12
PCDHA9-201ENST00000378122 COA5Q86WW8 74 aa8.03□□□□□ -1.12
PCDHA9-201ENST00000378122 ERC2-IT1O76042 136 aa8.03□□□□□ -1.12
PCDHA9-201ENST00000378122 Q8NAQ8 132 aa8.03□□□□□ -1.12
PCDHA9-201ENST00000378122 GVQW2A0A096LPI5 108 aaPredicted RBP8.02□□□□□ -1.13
PCDHA9-201ENST00000378122 PCNTO95613 3336 aa8.02□□□□□ -1.13
PCDHA9-201ENST00000378122 POLQO75417 2590 aa8.02□□□□□ -1.13
PCDHA9-201ENST00000378122 SPTBN4Q9H254 2564 aa8.02□□□□□ -1.13
PCDHA9-201ENST00000378122 VPREB1P12018 145 aa8.01□□□□□ -1.13
PCDHA9-201ENST00000378122 C5orf42Q9H799 3197 aa8□□□□□ -1.13
PCDHA9-201ENST00000378122 SETD2Q9BYW2 2564 aaPredicted RBP8□□□□□ -1.13
PCDHA9-201ENST00000378122 DNAH12Q6ZR08 3092 aa8□□□□□ -1.13
PCDHA9-201ENST00000378122 A8MWP4 228 aa7.99□□□□□ -1.13
PCDHA9-201ENST00000378122 KLK9Q2XQG4 91 aa7.99□□□□□ -1.13
PCDHA9-201ENST00000378122 LINC00336Q6ZUF6 198 aa7.99□□□□□ -1.13
PCDHA9-201ENST00000378122 OBSCN-AS1Q96MR7 158 aa7.99□□□□□ -1.13
PCDHA9-201ENST00000378122 CEP350Q5VT06 3117 aa7.97□□□□□ -1.13
PCDHA9-201ENST00000378122 BPTFQ12830 3046 aa7.97□□□□□ -1.13
PCDHA9-201ENST00000378122 LINC00528Q8N1L1 170 aa7.97□□□□□ -1.13
PCDHA9-201ENST00000378122 DSCR10P59022 87 aa7.96□□□□□ -1.13
PCDHA9-201ENST00000378122 SSBP3-AS1Q7Z2R9 100 aa7.96□□□□□ -1.13
PCDHA9-201ENST00000378122 A0A0D9SG42 100 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms