RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 TRAV10A0A0B4J240 114 aa5.53□□□□□ -1.52
CKAP2-203ENST00000378037 B5MCH6 92 aa5.53□□□□□ -1.52
CKAP2-203ENST00000378037 WFDC9Q8NEX5 89 aa5.53□□□□□ -1.52
CKAP2-203ENST00000378037 SPANXB1Q9NS25 103 aaPredicted RBP5.53□□□□□ -1.52
CKAP2-203ENST00000378037 FAM104AQ969W3 186 aa5.53□□□□□ -1.52
CKAP2-203ENST00000378037 SYCNQ0VAF6 134 aa5.52□□□□□ -1.53
CKAP2-203ENST00000378037 TEN1Q86WV5 123 aa5.52□□□□□ -1.53
CKAP2-203ENST00000378037 Q6ZQY7 126 aa5.52□□□□□ -1.53
CKAP2-203ENST00000378037 TRBV10-3A0A0K0K1G6 114 aa5.52□□□□□ -1.53
CKAP2-203ENST00000378037 USP17L23D6RBM5 183 aa5.52□□□□□ -1.53
CKAP2-203ENST00000378037 CHTF8P0CG12 524 aa5.52□□□□□ -1.53
CKAP2-203ENST00000378037 ENHOQ6UWT2 76 aa5.52□□□□□ -1.53
CKAP2-203ENST00000378037 ANK2Q01484 3957 aa5.51□□□□□ -1.53
CKAP2-203ENST00000378037 IFITM1P13164 125 aa5.51□□□□□ -1.53
CKAP2-203ENST00000378037 C3orf22Q8N5N4 141 aa5.51□□□□□ -1.53
CKAP2-203ENST00000378037 FAM218AQ96MZ4 157 aa5.51□□□□□ -1.53
CKAP2-203ENST00000378037 DNAH10OSP0CZ25 163 aa5.5□□□□□ -1.53
CKAP2-203ENST00000378037 FLG2Q5D862 2391 aaPredicted RBP5.5□□□□□ -1.53
CKAP2-203ENST00000378037 FAM168BA1KXE4 195 aa5.5□□□□□ -1.53
CKAP2-203ENST00000378037 H7C423 109 aa5.5□□□□□ -1.53
CKAP2-203ENST00000378037 LINC00588Q9Y4M8 146 aa5.5□□□□□ -1.53
CKAP2-203ENST00000378037 SMCPP49901 116 aaPredicted RBP5.49□□□□□ -1.53
CKAP2-203ENST00000378037 A0A0B4J2C4 111 aa5.49□□□□□ -1.53
CKAP2-203ENST00000378037 ETDCA0A1B0GVM5 59 aa5.49□□□□□ -1.53
CKAP2-203ENST00000378037 IBA57-AS1B1ANH7 110 aa5.49□□□□□ -1.53
CKAP2-203ENST00000378037 C3orf84H3BNL1 204 aa5.49□□□□□ -1.53
CKAP2-203ENST00000378037 ANAPC13Q9BS18 74 aa5.49□□□□□ -1.53
CKAP2-203ENST00000378037 LINC01546A6NGU7 62 aa5.49□□□□□ -1.53
CKAP2-203ENST00000378037 TMEM126AQ9H061 195 aa5.48□□□□□ -1.53
CKAP2-203ENST00000378037 TRBV10-2A0A0K0K1G8 114 aa5.48□□□□□ -1.53
CKAP2-203ENST00000378037 HRCT1Q6UXD1 115 aa5.48□□□□□ -1.53
CKAP2-203ENST00000378037 SDIM1Q6ZPB5 146 aa5.48□□□□□ -1.53
CKAP2-203ENST00000378037 ORMDL1Q9P0S3 153 aa5.48□□□□□ -1.53
CKAP2-203ENST00000378037 A0A0G2JQZ4 141 aa5.48□□□□□ -1.53
CKAP2-203ENST00000378037 A0A1W2PNN7 141 aa5.48□□□□□ -1.53
CKAP2-203ENST00000378037 LITAFQ99732 161 aa5.47□□□□□ -1.53
CKAP2-203ENST00000378037 C6orf48Q9UBA6 75 aa5.47□□□□□ -1.53
CKAP2-203ENST00000378037 IGLV5-39A0A0G2JS06 123 aa5.47□□□□□ -1.53
CKAP2-203ENST00000378037 PRLHP81277 87 aa5.47□□□□□ -1.53
CKAP2-203ENST00000378037 XGP55808 180 aa5.46□□□□□ -1.54
CKAP2-203ENST00000378037 Q8IZM0 81 aa5.46□□□□□ -1.54
CKAP2-203ENST00000378037 DEFB116Q30KQ4 102 aa5.46□□□□□ -1.54
CKAP2-203ENST00000378037 IL17DQ8TAD2 202 aa5.46□□□□□ -1.54
CKAP2-203ENST00000378037 DIRC1Q969H9 104 aa5.46□□□□□ -1.54
CKAP2-203ENST00000378037 FAM19A1Q7Z5A9 133 aa5.46□□□□□ -1.54
CKAP2-203ENST00000378037 SPANXDQ9BXN6 97 aa5.46□□□□□ -1.54
CKAP2-203ENST00000378037 CSDC2Q9Y534 153 aaKnown RBP5.46□□□□□ -1.54
CKAP2-203ENST00000378037 NHLRC4P0CG21 123 aaPredicted RBP5.45□□□□□ -1.54
CKAP2-203ENST00000378037 CXCL5P42830 114 aa5.45□□□□□ -1.54
CKAP2-203ENST00000378037 A0A087WVE0 104 aa5.44□□□□□ -1.54
CKAP2-203ENST00000378037 A0A1B0GUV1 79 aa5.44□□□□□ -1.54
CKAP2-203ENST00000378037 hADV29S1A0JD25 119 aa5.44□□□□□ -1.54
CKAP2-203ENST00000378037 LST1O00453 97 aa5.44□□□□□ -1.54
CKAP2-203ENST00000378037 TRBV30A0A0K0K1B3 111 aa5.44□□□□□ -1.54
CKAP2-203ENST00000378037 DSCR8Q96T75 97 aa5.44□□□□□ -1.54
CKAP2-203ENST00000378037 DNAH3Q8TD57 4116 aa5.43□□□□□ -1.54
CKAP2-203ENST00000378037 TRAV23DV6A0A075B6W5 121 aa5.43□□□□□ -1.54
CKAP2-203ENST00000378037 CCDC179H3BU77 68 aa5.43□□□□□ -1.54
CKAP2-203ENST00000378037 C9orf129Q5T035 196 aaKnown RBP5.43□□□□□ -1.54
CKAP2-203ENST00000378037 RMI2Q96E14 147 aa5.43□□□□□ -1.54
CKAP2-203ENST00000378037 FAM236AA0A1B0GUQ0 79 aa5.42□□□□□ -1.54
CKAP2-203ENST00000378037 FAM236BA0A1B0GV22 79 aa5.42□□□□□ -1.54
CKAP2-203ENST00000378037 TRACP01848 142 aa5.42□□□□□ -1.54
CKAP2-203ENST00000378037 COX7BP24311 80 aa5.42□□□□□ -1.54
CKAP2-203ENST00000378037 UBE2AP49459 152 aa5.42□□□□□ -1.54
CKAP2-203ENST00000378037 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.42□□□□□ -1.54
CKAP2-203ENST00000378037 Q6ZRP5 223 aa5.42□□□□□ -1.54
CKAP2-203ENST00000378037 ZNF73O43830 326 aaPredicted RBP5.42□□□□□ -1.54
CKAP2-203ENST00000378037 FBN3Q75N90 2809 aa5.41□□□□□ -1.54
CKAP2-203ENST00000378037 CDIP1Q9H305 208 aa5.41□□□□□ -1.54
CKAP2-203ENST00000378037 Q8N9L7 120 aa5.41□□□□□ -1.54
CKAP2-203ENST00000378037 Q8NDZ9 215 aa5.41□□□□□ -1.54
CKAP2-203ENST00000378037 IGLV5-45A0A087WSX0 123 aa5.4□□□□□ -1.54
CKAP2-203ENST00000378037 F8WEM9 126 aa5.4□□□□□ -1.55
CKAP2-203ENST00000378037 H0YGX0 51 aa5.4□□□□□ -1.55
CKAP2-203ENST00000378037 IGLV9-49A0A0B4J1Y8 123 aa5.4□□□□□ -1.55
CKAP2-203ENST00000378037 RBM3P98179 157 aaKnown RBP5.4□□□□□ -1.55
CKAP2-203ENST00000378037 SERTAD4-AS1Q5TG53 156 aa5.4□□□□□ -1.55
CKAP2-203ENST00000378037 LOC107984640A0A0U1RRK4 108 aa5.39□□□□□ -1.55
CKAP2-203ENST00000378037 C5orf47Q569G3 176 aa5.39□□□□□ -1.55
CKAP2-203ENST00000378037 INAFM2P0DMQ5 153 aa5.39□□□□□ -1.55
CKAP2-203ENST00000378037 NDUFC2-KCTD14E9PQ53 114 aa5.38□□□□□ -1.55
CKAP2-203ENST00000378037 CCKP06307 115 aa5.38□□□□□ -1.55
CKAP2-203ENST00000378037 KIAA0087Q14695 138 aa5.38□□□□□ -1.55
CKAP2-203ENST00000378037 ST20-AS1Q8NBB2 130 aa5.38□□□□□ -1.55
CKAP2-203ENST00000378037 PRO0461Q9UI25 63 aa5.38□□□□□ -1.55
CKAP2-203ENST00000378037 UBL5Q9BZL1 73 aa5.38□□□□□ -1.55
CKAP2-203ENST00000378037 C9orf153Q5TBE3 101 aa5.38□□□□□ -1.55
CKAP2-203ENST00000378037 H3BT86 120 aa5.37□□□□□ -1.55
CKAP2-203ENST00000378037 TIMM17BO60830 172 aa5.37□□□□□ -1.55
CKAP2-203ENST00000378037 SPINK6Q6UWN8 80 aa5.37□□□□□ -1.55
CKAP2-203ENST00000378037 PHF5AQ7RTV0 110 aaKnown RBP5.37□□□□□ -1.55
CKAP2-203ENST00000378037 CMYA5Q8N3K9 4069 aa5.37□□□□□ -1.55
CKAP2-203ENST00000378037 LINC01556Q5JQF7 62 aa5.36□□□□□ -1.55
CKAP2-203ENST00000378037 C15orf56Q8N910 161 aa5.36□□□□□ -1.55
CKAP2-203ENST00000378037 C7orf33Q8WU49 177 aa5.36□□□□□ -1.55
CKAP2-203ENST00000378037 ANAPC11Q9NYG5 84 aa5.36□□□□□ -1.55
CKAP2-203ENST00000378037 Q8N814 137 aa5.36□□□□□ -1.55
CKAP2-203ENST00000378037 KRTAP1-5Q9BYS1 174 aa5.36□□□□□ -1.55
CKAP2-203ENST00000378037 WIPF1O43516 503 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms