RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 A0A1B0GW54 56 aa7.56□□□□□ -1.2
RTN3-206ENST00000377819 LINC01554Q52M75 96 aa7.56□□□□□ -1.2
RTN3-206ENST00000377819 LINC00846Q9NV44 126 aa7.55□□□□□ -1.2
RTN3-206ENST00000377819 C11orf21Q9P2W6 132 aa7.55□□□□□ -1.2
RTN3-206ENST00000377819 ATRQ13535 2644 aa7.55□□□□□ -1.2
RTN3-206ENST00000377819 TRAV22A0A0B4J277 110 aa7.55□□□□□ -1.2
RTN3-206ENST00000377819 C11orf1Q9H5F2 150 aa7.55□□□□□ -1.2
RTN3-206ENST00000377819 IGLV1-40P01703 118 aa7.55□□□□□ -1.2
RTN3-206ENST00000377819 Q6ZRU5 148 aa7.55□□□□□ -1.2
RTN3-206ENST00000377819 SMIM29Q86T20 159 aa7.55□□□□□ -1.2
RTN3-206ENST00000377819 UQCR11O14957 56 aa7.54□□□□□ -1.2
RTN3-206ENST00000377819 PRR9Q5T870 116 aa7.54□□□□□ -1.2
RTN3-206ENST00000377819 LINC01561Q8N1V8 128 aa7.54□□□□□ -1.2
RTN3-206ENST00000377819 C18orf65Q6ZTR6 163 aa7.54□□□□□ -1.2
RTN3-206ENST00000377819 LYPD5Q6UWN5 251 aa7.53□□□□□ -1.2
RTN3-206ENST00000377819 KIF25-AS1Q9Y6Z4 181 aa7.53□□□□□ -1.2
RTN3-206ENST00000377819 MAST4O15021 2626 aa7.53□□□□□ -1.2
RTN3-206ENST00000377819 ADAMTS20P59510 1910 aa7.52□□□□□ -1.2
RTN3-206ENST00000377819 KIAA0087Q14695 138 aa7.52□□□□□ -1.21
RTN3-206ENST00000377819 BCE1O60756 84 aa7.52□□□□□ -1.21
RTN3-206ENST00000377819 C9orf129Q5T035 196 aaKnown RBP7.52□□□□□ -1.21
RTN3-206ENST00000377819 CNFNQ9BYD5 112 aa7.52□□□□□ -1.21
RTN3-206ENST00000377819 CDIP1Q9H305 208 aa7.52□□□□□ -1.21
RTN3-206ENST00000377819 C5orf42Q9H799 3197 aa7.51□□□□□ -1.21
RTN3-206ENST00000377819 MGAM2Q2M2H8 2515 aa7.51□□□□□ -1.21
RTN3-206ENST00000377819 Q6ZRP5 223 aa7.51□□□□□ -1.21
RTN3-206ENST00000377819 C1orf229Q6ZS94 237 aaPredicted RBP7.51□□□□□ -1.21
RTN3-206ENST00000377819 LOC101927531A0A1B0GV80 90 aa7.51□□□□□ -1.21
RTN3-206ENST00000377819 C16orf90A8MZG2 172 aa7.51□□□□□ -1.21
RTN3-206ENST00000377819 BRWD1-AS2P59051 145 aa7.5□□□□□ -1.21
RTN3-206ENST00000377819 A8MTW9 85 aa7.5□□□□□ -1.21
RTN3-206ENST00000377819 Q8NBF4 154 aa7.49□□□□□ -1.21
RTN3-206ENST00000377819 Q96NJ1 140 aa7.49□□□□□ -1.21
RTN3-206ENST00000377819 C11orf71Q6IPW1 123 aa7.49□□□□□ -1.21
RTN3-206ENST00000377819 MDFIQ99750 246 aa7.48□□□□□ -1.21
RTN3-206ENST00000377819 EML5Q05BV3 1969 aa7.48□□□□□ -1.21
RTN3-206ENST00000377819 EPM2AB3EWF7 344 aa7.47□□□□□ -1.21
RTN3-206ENST00000377819 LINC00167Q96N53 147 aa7.47□□□□□ -1.21
RTN3-206ENST00000377819 COL5A1P20908 1838 aaPredicted RBP7.47□□□□□ -1.21
RTN3-206ENST00000377819 WISP2O76076 250 aa7.47□□□□□ -1.21
RTN3-206ENST00000377819 SPATA3Q8NHX4 192 aa7.47□□□□□ -1.21
RTN3-206ENST00000377819 AMELXQ99217 191 aa7.47□□□□□ -1.21
RTN3-206ENST00000377819 ADAMTSL4-AS1Q5T5F5 129 aa7.47□□□□□ -1.21
RTN3-206ENST00000377819 RANBP2P49792 3224 aaKnown RBP7.46□□□□□ -1.21
RTN3-206ENST00000377819 UNC80Q8N2C7 3258 aa7.46□□□□□ -1.21
RTN3-206ENST00000377819 FAM19A4Q96LR4 140 aa7.46□□□□□ -1.22
RTN3-206ENST00000377819 PRO3102Q9H379 93 aa7.46□□□□□ -1.22
RTN3-206ENST00000377819 GAS8-AS1O95177 125 aa7.46□□□□□ -1.22
RTN3-206ENST00000377819 TICRRQ7Z2Z1 1910 aa7.46□□□□□ -1.22
RTN3-206ENST00000377819 DMDP11532 3685 aa7.45□□□□□ -1.22
RTN3-206ENST00000377819 TANC2Q9HCD6 1990 aa7.45□□□□□ -1.22
RTN3-206ENST00000377819 NUP210LQ5VU65 1888 aa7.44□□□□□ -1.22
RTN3-206ENST00000377819 STAB1Q9NY15 2570 aa7.44□□□□□ -1.22
RTN3-206ENST00000377819 FHL3Q13643 280 aa7.44□□□□□ -1.22
RTN3-206ENST00000377819 DNAH14Q0VDD8 3507 aa7.44□□□□□ -1.22
RTN3-206ENST00000377819 SMR3AQ99954 134 aa7.44□□□□□ -1.22
RTN3-206ENST00000377819 C11orf72Q8NBR9 251 aa7.43□□□□□ -1.22
RTN3-206ENST00000377819 CYP4F30PQ9H0H9 118 aa7.43□□□□□ -1.22
RTN3-206ENST00000377819 WDFY3Q8IZQ1 3526 aa7.43□□□□□ -1.22
RTN3-206ENST00000377819 A0A1W2PNU3 283 aaPredicted RBP7.43□□□□□ -1.22
RTN3-206ENST00000377819 CSNK1G2-AS1Q8NCQ2 148 aa7.42□□□□□ -1.22
RTN3-206ENST00000377819 DMBT1Q9UGM3 2413 aaPredicted RBP7.42□□□□□ -1.22
RTN3-206ENST00000377819 HCFC1P51610 2035 aa7.42□□□□□ -1.22
RTN3-206ENST00000377819 FLNBO75369 2602 aaKnown RBP7.41□□□□□ -1.22
RTN3-206ENST00000377819 TSPEAR-AS2P59090 65 aa7.41□□□□□ -1.22
RTN3-206ENST00000377819 RPS28P62857 69 aaKnown RBP7.4□□□□□ -1.22
RTN3-206ENST00000377819 LINC00476Q8WZB0 136 aa7.4□□□□□ -1.22
RTN3-206ENST00000377819 IGLV6-57P01721 117 aa7.39□□□□□ -1.23
RTN3-206ENST00000377819 MIR22HGQ0VDD5 57 aa7.39□□□□□ -1.23
RTN3-206ENST00000377819 Q6ZQT0 140 aa7.39□□□□□ -1.23
RTN3-206ENST00000377819 RBM12B-AS1Q9P1G2 102 aa7.39□□□□□ -1.23
RTN3-206ENST00000377819 IGLV5-37A0A075B6J1 123 aa7.39□□□□□ -1.23
RTN3-206ENST00000377819 AVPP01185 164 aa7.39□□□□□ -1.23
RTN3-206ENST00000377819 ZNF295-AS1Q8N0V1 137 aa7.39□□□□□ -1.23
RTN3-206ENST00000377819 C16orf95Q9H693 158 aa7.38□□□□□ -1.23
RTN3-206ENST00000377819 TMEM131Q92545 1883 aa7.38□□□□□ -1.23
RTN3-206ENST00000377819 MRPL34Q9BQ48 92 aaKnown RBP7.38□□□□□ -1.23
RTN3-206ENST00000377819 HECTD1Q9ULT8 2610 aa7.37□□□□□ -1.23
RTN3-206ENST00000377819 CDC42SE1Q9NRR8 79 aa7.37□□□□□ -1.23
RTN3-206ENST00000377819 RTL8CO15255 209 aa7.37□□□□□ -1.23
RTN3-206ENST00000377819 ZNF580Q9UK33 172 aa7.37□□□□□ -1.23
RTN3-206ENST00000377819 IGHV3OR16-9A0A0B4J2B5 98 aa7.35□□□□□ -1.23
RTN3-206ENST00000377819 ST20-AS1Q8NBB2 130 aa7.35□□□□□ -1.23
RTN3-206ENST00000377819 PHF5AQ7RTV0 110 aaKnown RBP7.35□□□□□ -1.23
RTN3-206ENST00000377819 Q6ZRX8 168 aa7.35□□□□□ -1.23
RTN3-206ENST00000377819 IGLV5-48A0A075B6I7 105 aa7.34□□□□□ -1.23
RTN3-206ENST00000377819 CEP192Q8TEP8 1941 aa7.34□□□□□ -1.23
RTN3-206ENST00000377819 MUC3AQ02505 3323 aa7.34□□□□□ -1.23
RTN3-206ENST00000377819 A8MUN3 132 aa7.34□□□□□ -1.23
RTN3-206ENST00000377819 LINC00315P59091 139 aa7.34□□□□□ -1.23
RTN3-206ENST00000377819 RPL37AP61513 92 aaKnown RBP7.34□□□□□ -1.23
RTN3-206ENST00000377819 TRBV7-4A0A0J9YYF1 115 aa7.33□□□□□ -1.24
RTN3-206ENST00000377819 NBDYA0A0U1RRE5 68 aa7.33□□□□□ -1.24
RTN3-206ENST00000377819 C4orf26Q17RF5 130 aa7.33□□□□□ -1.24
RTN3-206ENST00000377819 COA5Q86WW8 74 aa7.33□□□□□ -1.24
RTN3-206ENST00000377819 SPENQ96T58 3664 aaKnown RBP7.33□□□□□ -1.24
RTN3-206ENST00000377819 A8MWP4 228 aa7.32□□□□□ -1.24
RTN3-206ENST00000377819 LINC00483Q53H64 154 aa7.32□□□□□ -1.24
RTN3-206ENST00000377819 WWC2-AS2Q96NR7 200 aa7.32□□□□□ -1.24
RTN3-206ENST00000377819 ADAMTS9Q9P2N4 1935 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms