RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 CDIP1Q9H305 208 aa12.3□□□□□ -0.44
CNTNAP3-204ENST00000377656 PTPRBP23467 1997 aa12.3□□□□□ -0.44
CNTNAP3-204ENST00000377656 TRBV7-6A0A0J9YX20 115 aa12.3□□□□□ -0.44
CNTNAP3-204ENST00000377656 H3BNG1 76 aa12.3□□□□□ -0.44
CNTNAP3-204ENST00000377656 MDFIQ99750 246 aa12.3□□□□□ -0.44
CNTNAP3-204ENST00000377656 Q9UF83 564 aa12.29□□□□□ -0.44
CNTNAP3-204ENST00000377656 C6orf48Q9UBA6 75 aa12.28□□□□□ -0.44
CNTNAP3-204ENST00000377656 PCSK5Q92824 1860 aa12.28□□□□□ -0.44
CNTNAP3-204ENST00000377656 TRBV7-7A0A0K0K1E9 115 aa12.27□□□□□ -0.44
CNTNAP3-204ENST00000377656 PCOTHQ58A44 107 aa12.27□□□□□ -0.44
CNTNAP3-204ENST00000377656 MGAM2Q2M2H8 2515 aa12.27□□□□□ -0.44
CNTNAP3-204ENST00000377656 KLK9Q2XQG4 91 aa12.27□□□□□ -0.45
CNTNAP3-204ENST00000377656 LINC00167Q96N53 147 aa12.26□□□□□ -0.45
CNTNAP3-204ENST00000377656 PRO0461Q9UI25 63 aa12.26□□□□□ -0.45
CNTNAP3-204ENST00000377656 HCG22E2RYF7 251 aa12.26□□□□□ -0.45
CNTNAP3-204ENST00000377656 H0Y9P7 68 aa12.26□□□□□ -0.45
CNTNAP3-204ENST00000377656 KIAA0087Q14695 138 aa12.26□□□□□ -0.45
CNTNAP3-204ENST00000377656 KRTAP24-1Q3LI83 254 aa12.25□□□□□ -0.45
CNTNAP3-204ENST00000377656 TMEM254Q8TBM7 123 aa12.25□□□□□ -0.45
CNTNAP3-204ENST00000377656 SOSTDC1Q6X4U4 206 aa12.25□□□□□ -0.45
CNTNAP3-204ENST00000377656 SMCPP49901 116 aaPredicted RBP12.25□□□□□ -0.45
CNTNAP3-204ENST00000377656 HECTD1Q9ULT8 2610 aa12.24□□□□□ -0.45
CNTNAP3-204ENST00000377656 RETNLBQ9BQ08 111 aa12.24□□□□□ -0.45
CNTNAP3-204ENST00000377656 SBSPONQ8IVN8 264 aa12.24□□□□□ -0.45
CNTNAP3-204ENST00000377656 LIMD2Q9BT23 127 aa12.23□□□□□ -0.45
CNTNAP3-204ENST00000377656 CXCL6P80162 114 aa12.23□□□□□ -0.45
CNTNAP3-204ENST00000377656 SPATA3Q8NHX4 192 aa12.21□□□□□ -0.45
CNTNAP3-204ENST00000377656 COL27A1Q8IZC6 1860 aaPredicted RBP12.19□□□□□ -0.46
CNTNAP3-204ENST00000377656 Q8NAQ8 132 aa12.18□□□□□ -0.46
CNTNAP3-204ENST00000377656 hDV103S1A0JD37 113 aa12.16□□□□□ -0.46
CNTNAP3-204ENST00000377656 SPINK1P00995 79 aa12.15□□□□□ -0.46
CNTNAP3-204ENST00000377656 FAM218AQ96MZ4 157 aa12.15□□□□□ -0.47
CNTNAP3-204ENST00000377656 ELOF1P60002 83 aaKnown RBP12.14□□□□□ -0.47
CNTNAP3-204ENST00000377656 MOBPQ13875 183 aa12.12□□□□□ -0.47
CNTNAP3-204ENST00000377656 C1orf64Q8NEQ6 169 aa12.12□□□□□ -0.47
CNTNAP3-204ENST00000377656 ATRQ13535 2644 aa12.12□□□□□ -0.47
CNTNAP3-204ENST00000377656 MAST4O15021 2626 aa12.11□□□□□ -0.47
CNTNAP3-204ENST00000377656 A0A1B0GW54 56 aa12.11□□□□□ -0.47
CNTNAP3-204ENST00000377656 LINC00588Q9Y4M8 146 aa12.11□□□□□ -0.47
CNTNAP3-204ENST00000377656 NBDYA0A0U1RRE5 68 aa12.1□□□□□ -0.47
CNTNAP3-204ENST00000377656 Q6ZRX8 168 aa12.1□□□□□ -0.47
CNTNAP3-204ENST00000377656 SMIM29Q86T20 159 aa12.09□□□□□ -0.47
CNTNAP3-204ENST00000377656 C1orf195Q5TG92 126 aa12.09□□□□□ -0.47
CNTNAP3-204ENST00000377656 SPACA4Q8TDM5 124 aa12.09□□□□□ -0.47
CNTNAP3-204ENST00000377656 PSPHP1O15172 72 aa12.08□□□□□ -0.48
CNTNAP3-204ENST00000377656 IGKV2D-30A0A075B6S6 120 aa12.08□□□□□ -0.48
CNTNAP3-204ENST00000377656 IGKV2-30P06310 120 aa12.08□□□□□ -0.48
CNTNAP3-204ENST00000377656 PHF5AQ7RTV0 110 aaKnown RBP12.08□□□□□ -0.48
CNTNAP3-204ENST00000377656 PMAIP1Q13794 54 aa12.07□□□□□ -0.48
CNTNAP3-204ENST00000377656 Q8NBF4 154 aa12.07□□□□□ -0.48
CNTNAP3-204ENST00000377656 GVQW2A0A096LPI5 108 aaPredicted RBP12.06□□□□□ -0.48
CNTNAP3-204ENST00000377656 C16orf90A8MZG2 172 aa12.06□□□□□ -0.48
CNTNAP3-204ENST00000377656 C5orf42Q9H799 3197 aa12.06□□□□□ -0.48
CNTNAP3-204ENST00000377656 TP53AIP1Q9HCN2 124 aa12.05□□□□□ -0.48
CNTNAP3-204ENST00000377656 LINC00476Q8WZB0 136 aa12.04□□□□□ -0.48
CNTNAP3-204ENST00000377656 CHD7Q9P2D1 2997 aa12.04□□□□□ -0.48
CNTNAP3-204ENST00000377656 RTL8CO15255 209 aa12.04□□□□□ -0.48
CNTNAP3-204ENST00000377656 Q6ZQT0 140 aa12.03□□□□□ -0.48
CNTNAP3-204ENST00000377656 EPM2AB3EWF7 344 aa12.02□□□□□ -0.48
CNTNAP3-204ENST00000377656 CRYGAP11844 174 aa12.02□□□□□ -0.49
CNTNAP3-204ENST00000377656 BCE1O60756 84 aa12.02□□□□□ -0.49
CNTNAP3-204ENST00000377656 DNAH10OSP0CZ25 163 aa12.01□□□□□ -0.49
CNTNAP3-204ENST00000377656 LITAFQ99732 161 aa12.01□□□□□ -0.49
CNTNAP3-204ENST00000377656 LOC110117498A0A087WWA1 95 aa12.01□□□□□ -0.49
CNTNAP3-204ENST00000377656 Q6ZRP5 223 aa12□□□□□ -0.49
CNTNAP3-204ENST00000377656 BPTFQ12830 3046 aa11.99□□□□□ -0.49
CNTNAP3-204ENST00000377656 ST20-AS1Q8NBB2 130 aa11.99□□□□□ -0.49
CNTNAP3-204ENST00000377656 CSNK1G2-AS1Q8NCQ2 148 aa11.98□□□□□ -0.49
CNTNAP3-204ENST00000377656 CHTF8P0CG12 524 aa11.97□□□□□ -0.49
CNTNAP3-204ENST00000377656 VPREB1P12018 145 aa11.97□□□□□ -0.49
CNTNAP3-204ENST00000377656 RANBP2P49792 3224 aaKnown RBP11.96□□□□□ -0.49
CNTNAP3-204ENST00000377656 IGLV6-57P01721 117 aa11.94□□□□□ -0.5
CNTNAP3-204ENST00000377656 FAM229AH3BQW9 127 aa11.93□□□□□ -0.5
CNTNAP3-204ENST00000377656 A0A096LNT2 108 aa11.92□□□□□ -0.5
CNTNAP3-204ENST00000377656 C7orf65Q6ZTY9 151 aa11.92□□□□□ -0.5
CNTNAP3-204ENST00000377656 WWC2-AS2Q96NR7 200 aa11.92□□□□□ -0.5
CNTNAP3-204ENST00000377656 TYMSOSQ8TAI1 123 aa11.91□□□□□ -0.5
CNTNAP3-204ENST00000377656 H3BPC8 53 aa11.89□□□□□ -0.51
CNTNAP3-204ENST00000377656 ACYP2P14621 99 aa11.89□□□□□ -0.51
CNTNAP3-204ENST00000377656 TRAV22A0A0B4J277 110 aa11.89□□□□□ -0.51
CNTNAP3-204ENST00000377656 LINC00313P59037 77 aa11.88□□□□□ -0.51
CNTNAP3-204ENST00000377656 TRBV7-4A0A0J9YYF1 115 aa11.88□□□□□ -0.51
CNTNAP3-204ENST00000377656 FAM168BA1KXE4 195 aa11.87□□□□□ -0.51
CNTNAP3-204ENST00000377656 FLNAP21333 2647 aaKnown RBP11.87□□□□□ -0.51
CNTNAP3-204ENST00000377656 CENPEQ02224 2701 aa11.87□□□□□ -0.51
CNTNAP3-204ENST00000377656 A0A0C4DFX4 3053 aa11.86□□□□□ -0.51
CNTNAP3-204ENST00000377656 A0A1B0GU69 56 aa11.85□□□□□ -0.51
CNTNAP3-204ENST00000377656 SERTAD4-AS1Q5TG53 156 aa11.85□□□□□ -0.51
CNTNAP3-204ENST00000377656 PRR34Q9NV39 138 aa11.85□□□□□ -0.51
CNTNAP3-204ENST00000377656 K7EIL1 84 aa11.85□□□□□ -0.51
CNTNAP3-204ENST00000377656 C19orf73Q9NVV2 129 aa11.85□□□□□ -0.51
CNTNAP3-204ENST00000377656 GIG44P09565 113 aaPredicted RBP11.84□□□□□ -0.51
CNTNAP3-204ENST00000377656 RPL37AP61513 92 aaKnown RBP11.84□□□□□ -0.51
CNTNAP3-204ENST00000377656 KCNQ1DNQ9H478 68 aa11.84□□□□□ -0.51
CNTNAP3-204ENST00000377656 HELZ2Q9BYK8 2649 aaKnown RBP11.84□□□□□ -0.51
CNTNAP3-204ENST00000377656 TM2D3Q9BRN9 247 aa11.84□□□□□ -0.51
CNTNAP3-204ENST00000377656 IGLV1-50A0A075B6I6 118 aa11.83□□□□□ -0.52
CNTNAP3-204ENST00000377656 KRTAP10-11P60412 298 aa11.83□□□□□ -0.52
CNTNAP3-204ENST00000377656 LINC00528Q8N1L1 170 aa11.81□□□□□ -0.52
CNTNAP3-204ENST00000377656 ITPR3Q14573 2671 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms