RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 PPDPFQ9H3Y8 114 aa11.45□□□□□ -0.58
C9orf43-202ENST00000374165 LOC107984156A0A0G2JMH3 177 aa11.45□□□□□ -0.58
C9orf43-202ENST00000374165 FUSP35637 526 aaKnown RBP eCLIP11.45□□□□□ -0.58
C9orf43-202ENST00000374165 ARL17AQ8IVW1 177 aa11.45□□□□□ -0.58
C9orf43-202ENST00000374165 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.44□□□□□ -0.58
C9orf43-202ENST00000374165 C9orf116Q5BN46 136 aaPredicted RBP11.42□□□□□ -0.58
C9orf43-202ENST00000374165 Q6ZRU5 148 aa11.42□□□□□ -0.58
C9orf43-202ENST00000374165 HECTD4Q9Y4D8 3996 aa11.42□□□□□ -0.58
C9orf43-202ENST00000374165 Q1RN00 199 aa11.42□□□□□ -0.58
C9orf43-202ENST00000374165 Q8N814 137 aa11.42□□□□□ -0.58
C9orf43-202ENST00000374165 CAMK2N2Q96S95 79 aa11.42□□□□□ -0.58
C9orf43-202ENST00000374165 PKD1P98161 4303 aa11.41□□□□□ -0.58
C9orf43-202ENST00000374165 DNAH11Q96DT5 4516 aa11.41□□□□□ -0.58
C9orf43-202ENST00000374165 H3BMG7 143 aa11.4□□□□□ -0.58
C9orf43-202ENST00000374165 COX17Q14061 63 aa11.4□□□□□ -0.58
C9orf43-202ENST00000374165 SND1-IT1Q9HBX3 110 aa11.4□□□□□ -0.58
C9orf43-202ENST00000374165 RPL13AP40429 203 aaKnown RBP11.4□□□□□ -0.59
C9orf43-202ENST00000374165 C2orf48Q96LS8 159 aa11.4□□□□□ -0.59
C9orf43-202ENST00000374165 C6orf48Q9UBA6 75 aa11.4□□□□□ -0.59
C9orf43-202ENST00000374165 PSMB2P49721 201 aa11.39□□□□□ -0.59
C9orf43-202ENST00000374165 SYCNQ0VAF6 134 aa11.38□□□□□ -0.59
C9orf43-202ENST00000374165 LYRM7Q5U5X0 104 aa11.38□□□□□ -0.59
C9orf43-202ENST00000374165 IGKV2-28A0A075B6P5 120 aa11.37□□□□□ -0.59
C9orf43-202ENST00000374165 IGKV2D-28P01615 120 aa11.37□□□□□ -0.59
C9orf43-202ENST00000374165 SCGB1C2P0DMR2 95 aa11.37□□□□□ -0.59
C9orf43-202ENST00000374165 LINC01620Q4KN68 170 aa11.37□□□□□ -0.59
C9orf43-202ENST00000374165 PKHD1P08F94 4074 aa11.37□□□□□ -0.59
C9orf43-202ENST00000374165 TRBV30A0A0K0K1B3 111 aa11.36□□□□□ -0.59
C9orf43-202ENST00000374165 TRIAP1O43715 76 aa11.36□□□□□ -0.59
C9orf43-202ENST00000374165 C14orf177Q52M58 125 aa11.36□□□□□ -0.59
C9orf43-202ENST00000374165 TCL1BO95988 128 aa11.36□□□□□ -0.59
C9orf43-202ENST00000374165 KRTAP10-2P60368 255 aa11.35□□□□□ -0.59
C9orf43-202ENST00000374165 CNBPP62633 177 aaKnown RBP11.35□□□□□ -0.59
C9orf43-202ENST00000374165 CARD19Q96LW7 228 aa11.35□□□□□ -0.59
C9orf43-202ENST00000374165 LINC00337Q8N6G1 96 aa11.35□□□□□ -0.59
C9orf43-202ENST00000374165 TRBV20-1A0A075B6N2 111 aa11.33□□□□□ -0.6
C9orf43-202ENST00000374165 TRAV13-2A0A0B4J235 113 aa11.32□□□□□ -0.6
C9orf43-202ENST00000374165 MTURNQ8N3F0 131 aa11.32□□□□□ -0.6
C9orf43-202ENST00000374165 F8WDY8 70 aa11.31□□□□□ -0.6
C9orf43-202ENST00000374165 DNAH5Q8TE73 4624 aa11.31□□□□□ -0.6
C9orf43-202ENST00000374165 F8W1H4 67 aa11.3□□□□□ -0.6
C9orf43-202ENST00000374165 C9orf163Q8N9P6 203 aa11.3□□□□□ -0.6
C9orf43-202ENST00000374165 PRO0461Q9UI25 63 aa11.3□□□□□ -0.6
C9orf43-202ENST00000374165 COX6CP09669 75 aa11.29□□□□□ -0.6
C9orf43-202ENST00000374165 Q6ZRP5 223 aa11.29□□□□□ -0.6
C9orf43-202ENST00000374165 LINC00336Q6ZUF6 198 aa11.29□□□□□ -0.6
C9orf43-202ENST00000374165 PRR3P79522 188 aaKnown RBP11.28□□□□□ -0.6
C9orf43-202ENST00000374165 Q8NDZ9 215 aa11.28□□□□□ -0.6
C9orf43-202ENST00000374165 NDUFC2O95298 119 aa11.27□□□□□ -0.61
C9orf43-202ENST00000374165 RNF151Q2KHN1 245 aa11.27□□□□□ -0.61
C9orf43-202ENST00000374165 IGLV5-52A0A0A0MRZ9 124 aa11.26□□□□□ -0.61
C9orf43-202ENST00000374165 NDUFC2-KCTD14E9PQ53 114 aa11.26□□□□□ -0.61
C9orf43-202ENST00000374165 CLEC2BQ92478 149 aa11.26□□□□□ -0.61
C9orf43-202ENST00000374165 A0A1B0GVY2 172 aa11.25□□□□□ -0.61
C9orf43-202ENST00000374165 ATXN8Q156A1 80 aa11.25□□□□□ -0.61
C9orf43-202ENST00000374165 GAGE2EQ4V326 116 aa11.25□□□□□ -0.61
C9orf43-202ENST00000374165 SDIM1Q6ZPB5 146 aa11.25□□□□□ -0.61
C9orf43-202ENST00000374165 XAGE1AQ9HD64 81 aa11.25□□□□□ -0.61
C9orf43-202ENST00000374165 GAGE2DQ9UEU5 116 aa11.25□□□□□ -0.61
C9orf43-202ENST00000374165 RPL28P46779 137 aaKnown RBP11.25□□□□□ -0.61
C9orf43-202ENST00000374165 RPL18AQ02543 176 aaKnown RBP11.25□□□□□ -0.61
C9orf43-202ENST00000374165 OR13C6PQ8NH95 151 aa11.25□□□□□ -0.61
C9orf43-202ENST00000374165 TLX1NBP0CAT3 122 aa11.24□□□□□ -0.61
C9orf43-202ENST00000374165 SMCPP49901 116 aaPredicted RBP11.24□□□□□ -0.61
C9orf43-202ENST00000374165 SMIM11BQ8TCY0 68 aa11.24□□□□□ -0.61
C9orf43-202ENST00000374165 A0A096LNI7 61 aa11.23□□□□□ -0.61
C9orf43-202ENST00000374165 CHTF8P0CG12 524 aa11.23□□□□□ -0.61
C9orf43-202ENST00000374165 PANO1I0J062 215 aa11.22□□□□□ -0.61
C9orf43-202ENST00000374165 GAGE2BQ13066 116 aa11.22□□□□□ -0.61
C9orf43-202ENST00000374165 LOC107984640A0A0U1RRK4 108 aa11.21□□□□□ -0.61
C9orf43-202ENST00000374165 LST1O00453 97 aa11.21□□□□□ -0.61
C9orf43-202ENST00000374165 C9orf129Q5T035 196 aaKnown RBP11.21□□□□□ -0.61
C9orf43-202ENST00000374165 IGKV2-24A0A0C4DH68 120 aa11.21□□□□□ -0.62
C9orf43-202ENST00000374165 C9JAW5 83 aa11.21□□□□□ -0.62
C9orf43-202ENST00000374165 NCR3O14931 201 aa11.21□□□□□ -0.62
C9orf43-202ENST00000374165 ETDBQ3ZM63 59 aa11.19□□□□□ -0.62
C9orf43-202ENST00000374165 OCIAD2Q56VL3 154 aa11.19□□□□□ -0.62
C9orf43-202ENST00000374165 C16orf90A8MZG2 172 aa11.18□□□□□ -0.62
C9orf43-202ENST00000374165 SLC25A20O43772 301 aa11.18□□□□□ -0.62
C9orf43-202ENST00000374165 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.18□□□□□ -0.62
C9orf43-202ENST00000374165 FAM168BA1KXE4 195 aa11.18□□□□□ -0.62
C9orf43-202ENST00000374165 TMEM126AQ9H061 195 aa11.18□□□□□ -0.62
C9orf43-202ENST00000374165 KRTAP10-1P60331 282 aa11.17□□□□□ -0.62
C9orf43-202ENST00000374165 FAM218AQ96MZ4 157 aa11.17□□□□□ -0.62
C9orf43-202ENST00000374165 KRTAP7-1Q8IUC3 87 aa11.16□□□□□ -0.62
C9orf43-202ENST00000374165 FAM30AQ9NZY2 134 aa11.15□□□□□ -0.62
C9orf43-202ENST00000374165 S100A7L2Q5SY68 101 aa11.14□□□□□ -0.63
C9orf43-202ENST00000374165 LRP1BQ9NZR2 4599 aa11.14□□□□□ -0.63
C9orf43-202ENST00000374165 TRBV10-2A0A0K0K1G8 114 aa11.14□□□□□ -0.63
C9orf43-202ENST00000374165 SERTAD4-AS1Q5TG53 156 aa11.14□□□□□ -0.63
C9orf43-202ENST00000374165 VPREB1P12018 145 aa11.13□□□□□ -0.63
C9orf43-202ENST00000374165 ANKRD29Q8N6D5 301 aa11.13□□□□□ -0.63
C9orf43-202ENST00000374165 DYNC1H1Q14204 4646 aaKnown RBP11.13□□□□□ -0.63
C9orf43-202ENST00000374165 EPPK1P58107 5090 aaKnown RBP11.13□□□□□ -0.63
C9orf43-202ENST00000374165 A0A1W2PNN7 141 aa11.13□□□□□ -0.63
C9orf43-202ENST00000374165 IGLV6-57P01721 117 aa11.12□□□□□ -0.63
C9orf43-202ENST00000374165 H0YGX0 51 aa11.11□□□□□ -0.63
C9orf43-202ENST00000374165 K7ERU9 68 aa11.11□□□□□ -0.63
C9orf43-202ENST00000374165 M0QXV9 152 aa11.11□□□□□ -0.63
C9orf43-202ENST00000374165 TRACP01848 142 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms