RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 LINC00575Q6W349 94 aa12.13□□□□□ -0.47
VPS26A-202ENST00000373382 ITPR2Q14571 2701 aa12.13□□□□□ -0.47
VPS26A-202ENST00000373382 RPS28P62857 69 aaKnown RBP12.13□□□□□ -0.47
VPS26A-202ENST00000373382 KLK12Q9UKR0 248 aa12.11□□□□□ -0.47
VPS26A-202ENST00000373382 LINC00167Q96N53 147 aa12.1□□□□□ -0.47
VPS26A-202ENST00000373382 CYSRT1A8MQ03 144 aa12.1□□□□□ -0.47
VPS26A-202ENST00000373382 NDUFC2O95298 119 aa12.1□□□□□ -0.47
VPS26A-202ENST00000373382 ATP5EP2Q5VTU8 51 aa12.1□□□□□ -0.47
VPS26A-202ENST00000373382 KRTAP1-3Q8IUG1 177 aa12.09□□□□□ -0.47
VPS26A-202ENST00000373382 UBR5O95071 2799 aaPredicted RBP12.09□□□□□ -0.47
VPS26A-202ENST00000373382 TRAV10A0A0B4J240 114 aa12.09□□□□□ -0.47
VPS26A-202ENST00000373382 Q6ZQT0 140 aa12.09□□□□□ -0.47
VPS26A-202ENST00000373382 LINC01547P58512 204 aaPredicted RBP12.08□□□□□ -0.48
VPS26A-202ENST00000373382 X6R8D5 127 aa12.08□□□□□ -0.48
VPS26A-202ENST00000373382 UNC79Q9P2D8 2635 aa12.08□□□□□ -0.48
VPS26A-202ENST00000373382 DAD1P61803 113 aa12.07□□□□□ -0.48
VPS26A-202ENST00000373382 COX17Q14061 63 aa12.07□□□□□ -0.48
VPS26A-202ENST00000373382 Q6ZVQ6 151 aa12.07□□□□□ -0.48
VPS26A-202ENST00000373382 ZNF561-AS1K7EIQ3 104 aa12.07□□□□□ -0.48
VPS26A-202ENST00000373382 TRBV10-3A0A0K0K1G6 114 aa12.06□□□□□ -0.48
VPS26A-202ENST00000373382 FAM236DA0A1B0GTK5 79 aa12.05□□□□□ -0.48
VPS26A-202ENST00000373382 FAM236CP0DP71 79 aa12.05□□□□□ -0.48
VPS26A-202ENST00000373382 RMI2Q96E14 147 aa12.05□□□□□ -0.48
VPS26A-202ENST00000373382 FASNP49327 2511 aaKnown RBP12.03□□□□□ -0.48
VPS26A-202ENST00000373382 HIGD2BQ4VC39 106 aa12.03□□□□□ -0.48
VPS26A-202ENST00000373382 ATRQ13535 2644 aa12.01□□□□□ -0.49
VPS26A-202ENST00000373382 CELA1Q9UNI1 258 aa12.01□□□□□ -0.49
VPS26A-202ENST00000373382 DIRC1Q969H9 104 aa12□□□□□ -0.49
VPS26A-202ENST00000373382 IGHV4-28A0A0C4DH34 117 aa12□□□□□ -0.49
VPS26A-202ENST00000373382 LYPD5Q6UWN5 251 aa12□□□□□ -0.49
VPS26A-202ENST00000373382 Q8N9L7 120 aa12□□□□□ -0.49
VPS26A-202ENST00000373382 SMR3AQ99954 134 aa11.99□□□□□ -0.49
VPS26A-202ENST00000373382 MUC7Q8TAX7 377 aa11.98□□□□□ -0.49
VPS26A-202ENST00000373382 TRAV7A0A075B6U4 112 aa11.98□□□□□ -0.49
VPS26A-202ENST00000373382 Q5XG85 94 aa11.98□□□□□ -0.49
VPS26A-202ENST00000373382 LINC00612Q8N6U2 182 aa11.98□□□□□ -0.49
VPS26A-202ENST00000373382 F8WEM9 126 aa11.98□□□□□ -0.49
VPS26A-202ENST00000373382 TEP1Q99973 2627 aaKnown RBP11.97□□□□□ -0.49
VPS26A-202ENST00000373382 H7BZZ5 65 aa11.96□□□□□ -0.49
VPS26A-202ENST00000373382 TM2D3Q9BRN9 247 aa11.96□□□□□ -0.49
VPS26A-202ENST00000373382 ZNF73O43830 326 aaPredicted RBP11.96□□□□□ -0.5
VPS26A-202ENST00000373382 IGLV6-57P01721 117 aa11.95□□□□□ -0.5
VPS26A-202ENST00000373382 COX7BP24311 80 aa11.95□□□□□ -0.5
VPS26A-202ENST00000373382 C6orf48Q9UBA6 75 aa11.95□□□□□ -0.5
VPS26A-202ENST00000373382 F8P00451 2351 aa11.95□□□□□ -0.5
VPS26A-202ENST00000373382 LOC110117498A0A087WWA1 95 aa11.95□□□□□ -0.5
VPS26A-202ENST00000373382 LYRM9A8MSI8 78 aa11.95□□□□□ -0.5
VPS26A-202ENST00000373382 KRTAP10-3P60369 221 aa11.95□□□□□ -0.5
VPS26A-202ENST00000373382 DEFB105AQ8NG35 78 aa11.94□□□□□ -0.5
VPS26A-202ENST00000373382 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.93□□□□□ -0.5
VPS26A-202ENST00000373382 CAMK2N2Q96S95 79 aa11.93□□□□□ -0.5
VPS26A-202ENST00000373382 C16orf95Q9H693 158 aa11.93□□□□□ -0.5
VPS26A-202ENST00000373382 TENM1Q9UKZ4 2725 aa11.92□□□□□ -0.5
VPS26A-202ENST00000373382 NDUFC2-KCTD14E9PQ53 114 aa11.91□□□□□ -0.5
VPS26A-202ENST00000373382 HELZ2Q9BYK8 2649 aaKnown RBP11.91□□□□□ -0.5
VPS26A-202ENST00000373382 HECTD1Q9ULT8 2610 aa11.91□□□□□ -0.5
VPS26A-202ENST00000373382 C3orf84H3BNL1 204 aa11.9□□□□□ -0.5
VPS26A-202ENST00000373382 A0A0J9YWU9 116 aa11.9□□□□□ -0.51
VPS26A-202ENST00000373382 IGHV4-30-4P0DP06 118 aa11.9□□□□□ -0.51
VPS26A-202ENST00000373382 LELP1Q5T871 98 aa11.88□□□□□ -0.51
VPS26A-202ENST00000373382 PKD1L1Q8TDX9 2849 aa11.88□□□□□ -0.51
VPS26A-202ENST00000373382 TENM4Q6N022 2769 aa11.88□□□□□ -0.51
VPS26A-202ENST00000373382 KRTAP1-1Q07627 177 aa11.88□□□□□ -0.51
VPS26A-202ENST00000373382 HIVEP1P15822 2718 aa11.88□□□□□ -0.51
VPS26A-202ENST00000373382 PDE6GP18545 87 aa11.87□□□□□ -0.51
VPS26A-202ENST00000373382 SPART-AS1P0CW21 52 aa11.86□□□□□ -0.51
VPS26A-202ENST00000373382 SERP1Q9Y6X1 66 aa11.86□□□□□ -0.51
VPS26A-202ENST00000373382 CXCL6P80162 114 aa11.85□□□□□ -0.51
VPS26A-202ENST00000373382 BPY2O14599 106 aa11.85□□□□□ -0.51
VPS26A-202ENST00000373382 NREPQ16612 68 aa11.85□□□□□ -0.51
VPS26A-202ENST00000373382 APOC4P55056 127 aa11.84□□□□□ -0.51
VPS26A-202ENST00000373382 WFDC10BQ8IUB3 73 aa11.84□□□□□ -0.51
VPS26A-202ENST00000373382 LINC00474Q9P2X8 69 aa11.84□□□□□ -0.51
VPS26A-202ENST00000373382 TRRAPQ9Y4A5 3859 aa11.83□□□□□ -0.51
VPS26A-202ENST00000373382 TRBV7-4A0A0J9YYF1 115 aa11.83□□□□□ -0.52
VPS26A-202ENST00000373382 KLKP1Q107X0 134 aa11.83□□□□□ -0.52
VPS26A-202ENST00000373382 Q6ZRU5 148 aa11.83□□□□□ -0.52
VPS26A-202ENST00000373382 MIFP14174 115 aa11.82□□□□□ -0.52
VPS26A-202ENST00000373382 ELOF1P60002 83 aaKnown RBP11.82□□□□□ -0.52
VPS26A-202ENST00000373382 C9orf66Q5T8R8 295 aa11.82□□□□□ -0.52
VPS26A-202ENST00000373382 ANK3Q12955 4377 aaKnown RBP11.82□□□□□ -0.52
VPS26A-202ENST00000373382 Q8NAQ8 132 aa11.81□□□□□ -0.52
VPS26A-202ENST00000373382 PDZD2O15018 2839 aa11.81□□□□□ -0.52
VPS26A-202ENST00000373382 LINC00336Q6ZUF6 198 aa11.81□□□□□ -0.52
VPS26A-202ENST00000373382 PRR34Q9NV39 138 aa11.8□□□□□ -0.52
VPS26A-202ENST00000373382 VPREB1P12018 145 aa11.8□□□□□ -0.52
VPS26A-202ENST00000373382 MPLKIPQ8TAP9 179 aa11.79□□□□□ -0.52
VPS26A-202ENST00000373382 TMEM254Q8TBM7 123 aa11.79□□□□□ -0.52
VPS26A-202ENST00000373382 TRBV7-6A0A0J9YX20 115 aa11.78□□□□□ -0.52
VPS26A-202ENST00000373382 M0R378 163 aa11.77□□□□□ -0.52
VPS26A-202ENST00000373382 IGKV2D-24A0A075B6R9 120 aa11.77□□□□□ -0.53
VPS26A-202ENST00000373382 WIPF1O43516 503 aa11.76□□□□□ -0.53
VPS26A-202ENST00000373382 RETNQ9HD89 108 aa11.76□□□□□ -0.53
VPS26A-202ENST00000373382 C1orf43Q9BWL3 253 aa11.75□□□□□ -0.53
VPS26A-202ENST00000373382 PKIGQ9Y2B9 76 aa11.75□□□□□ -0.53
VPS26A-202ENST00000373382 BAHCC1Q9P281 2608 aa11.75□□□□□ -0.53
VPS26A-202ENST00000373382 H3BQ85 93 aa11.75□□□□□ -0.53
VPS26A-202ENST00000373382 BCE1O60756 84 aa11.75□□□□□ -0.53
VPS26A-202ENST00000373382 FP248Q71RG6 208 aaPredicted RBP11.75□□□□□ -0.53
VPS26A-202ENST00000373382 GVQW2A0A096LPI5 108 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms