RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 SMIM20Q8N5G0 67 aa8.6□□□□□ -1.03
CTPS1-202ENST00000372621 IGLV6-57P01721 117 aa8.6□□□□□ -1.03
CTPS1-202ENST00000372621 SPART-AS1P0CW21 52 aa8.6□□□□□ -1.03
CTPS1-202ENST00000372621 A0A087WVE0 104 aa8.59□□□□□ -1.03
CTPS1-202ENST00000372621 S100A7L2Q5SY68 101 aa8.59□□□□□ -1.03
CTPS1-202ENST00000372621 ENHOQ6UWT2 76 aa8.59□□□□□ -1.03
CTPS1-202ENST00000372621 GVQW2A0A096LPI5 108 aaPredicted RBP8.59□□□□□ -1.03
CTPS1-202ENST00000372621 CRYGAP11844 174 aa8.59□□□□□ -1.03
CTPS1-202ENST00000372621 LYPD5Q6UWN5 251 aa8.59□□□□□ -1.03
CTPS1-202ENST00000372621 KMT2BQ9UMN6 2715 aaPredicted RBP8.59□□□□□ -1.03
CTPS1-202ENST00000372621 OTOGQ6ZRI0 2925 aa8.58□□□□□ -1.04
CTPS1-202ENST00000372621 KLK12Q9UKR0 248 aa8.58□□□□□ -1.04
CTPS1-202ENST00000372621 NOTCH2Q04721 2471 aa8.57□□□□□ -1.04
CTPS1-202ENST00000372621 NSD1Q96L73 2696 aaPredicted RBP8.57□□□□□ -1.04
CTPS1-202ENST00000372621 hADV29S1A0JD25 119 aa8.57□□□□□ -1.04
CTPS1-202ENST00000372621 HTN3P15516 51 aa8.57□□□□□ -1.04
CTPS1-202ENST00000372621 INAFM1C9JVW0 142 aa8.56□□□□□ -1.04
CTPS1-202ENST00000372621 HIVEP1P15822 2718 aa8.56□□□□□ -1.04
CTPS1-202ENST00000372621 ATP5EP2Q5VTU8 51 aa8.56□□□□□ -1.04
CTPS1-202ENST00000372621 C6orf48Q9UBA6 75 aa8.56□□□□□ -1.04
CTPS1-202ENST00000372621 USP17L23D6RBM5 183 aa8.55□□□□□ -1.04
CTPS1-202ENST00000372621 WIPF1O43516 503 aa8.55□□□□□ -1.04
CTPS1-202ENST00000372621 Q6ZQT0 140 aa8.55□□□□□ -1.04
CTPS1-202ENST00000372621 ZNF561-AS1K7EIQ3 104 aa8.54□□□□□ -1.04
CTPS1-202ENST00000372621 WFDC9Q8NEX5 89 aa8.54□□□□□ -1.04
CTPS1-202ENST00000372621 LOC110117498A0A087WWA1 95 aa8.54□□□□□ -1.04
CTPS1-202ENST00000372621 SERP2Q8N6R1 65 aa8.54□□□□□ -1.04
CTPS1-202ENST00000372621 UPK3BQ9BT76 320 aa8.54□□□□□ -1.04
CTPS1-202ENST00000372621 RBM3P98179 157 aaKnown RBP8.53□□□□□ -1.04
CTPS1-202ENST00000372621 CYSTM1Q9H1C7 97 aa8.53□□□□□ -1.04
CTPS1-202ENST00000372621 TRBV10-3A0A0K0K1G6 114 aa8.52□□□□□ -1.05
CTPS1-202ENST00000372621 TEP1Q99973 2627 aaKnown RBP8.51□□□□□ -1.05
CTPS1-202ENST00000372621 TRAV23DV6A0A075B6W5 121 aa8.51□□□□□ -1.05
CTPS1-202ENST00000372621 KRTAP26-1Q6PEX3 210 aa8.51□□□□□ -1.05
CTPS1-202ENST00000372621 ATRQ13535 2644 aa8.5□□□□□ -1.05
CTPS1-202ENST00000372621 Q6ZQY7 126 aa8.5□□□□□ -1.05
CTPS1-202ENST00000372621 UBL5Q9BZL1 73 aa8.5□□□□□ -1.05
CTPS1-202ENST00000372621 XAGE1AQ9HD64 81 aa8.5□□□□□ -1.05
CTPS1-202ENST00000372621 ANK2Q01484 3957 aa8.5□□□□□ -1.05
CTPS1-202ENST00000372621 M0R2N4 97 aa8.5□□□□□ -1.05
CTPS1-202ENST00000372621 FAM19A1Q7Z5A9 133 aa8.5□□□□□ -1.05
CTPS1-202ENST00000372621 H3BQ85 93 aa8.49□□□□□ -1.05
CTPS1-202ENST00000372621 LAMTOR3Q9UHA4 124 aa8.49□□□□□ -1.05
CTPS1-202ENST00000372621 WFDC10BQ8IUB3 73 aa8.49□□□□□ -1.05
CTPS1-202ENST00000372621 HECTD1Q9ULT8 2610 aa8.49□□□□□ -1.05
CTPS1-202ENST00000372621 H3BNG1 76 aa8.48□□□□□ -1.05
CTPS1-202ENST00000372621 DIRC1Q969H9 104 aa8.48□□□□□ -1.05
CTPS1-202ENST00000372621 ZNF73O43830 326 aaPredicted RBP8.48□□□□□ -1.05
CTPS1-202ENST00000372621 VPREB1P12018 145 aa8.47□□□□□ -1.05
CTPS1-202ENST00000372621 ELOF1P60002 83 aaKnown RBP8.47□□□□□ -1.05
CTPS1-202ENST00000372621 TRBV7-6A0A0J9YX20 115 aa8.46□□□□□ -1.05
CTPS1-202ENST00000372621 HIGD2BQ4VC39 106 aa8.46□□□□□ -1.06
CTPS1-202ENST00000372621 KPRPQ5T749 579 aaPredicted RBP8.46□□□□□ -1.06
CTPS1-202ENST00000372621 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.46□□□□□ -1.06
CTPS1-202ENST00000372621 DSCR8Q96T75 97 aa8.46□□□□□ -1.06
CTPS1-202ENST00000372621 PDE6GP18545 87 aa8.46□□□□□ -1.06
CTPS1-202ENST00000372621 EGFEM1PQ0D2K5 195 aa8.45□□□□□ -1.06
CTPS1-202ENST00000372621 C15orf56Q8N910 161 aa8.45□□□□□ -1.06
CTPS1-202ENST00000372621 CAMK2N2Q96S95 79 aa8.45□□□□□ -1.06
CTPS1-202ENST00000372621 COX7BP24311 80 aa8.45□□□□□ -1.06
CTPS1-202ENST00000372621 GHRHP01286 108 aa8.44□□□□□ -1.06
CTPS1-202ENST00000372621 CMYA5Q8N3K9 4069 aa8.44□□□□□ -1.06
CTPS1-202ENST00000372621 TRBV7-4A0A0J9YYF1 115 aa8.44□□□□□ -1.06
CTPS1-202ENST00000372621 LINC01547P58512 204 aaPredicted RBP8.44□□□□□ -1.06
CTPS1-202ENST00000372621 Q6ZRU5 148 aa8.44□□□□□ -1.06
CTPS1-202ENST00000372621 Q6ZVQ6 151 aa8.44□□□□□ -1.06
CTPS1-202ENST00000372621 RETNQ9HD89 108 aa8.43□□□□□ -1.06
CTPS1-202ENST00000372621 TMEM258P61165 79 aa8.43□□□□□ -1.06
CTPS1-202ENST00000372621 NDUFC2-KCTD14E9PQ53 114 aa8.42□□□□□ -1.06
CTPS1-202ENST00000372621 M0R378 163 aa8.42□□□□□ -1.06
CTPS1-202ENST00000372621 PKD1L1Q8TDX9 2849 aa8.42□□□□□ -1.06
CTPS1-202ENST00000372621 RPS28P62857 69 aaKnown RBP8.42□□□□□ -1.06
CTPS1-202ENST00000372621 Q6ZTC4 211 aa8.42□□□□□ -1.06
CTPS1-202ENST00000372621 LOC107984640A0A0U1RRK4 108 aa8.42□□□□□ -1.06
CTPS1-202ENST00000372621 ESRGQ1W209 222 aa8.41□□□□□ -1.06
CTPS1-202ENST00000372621 J3KT08 172 aa8.41□□□□□ -1.06
CTPS1-202ENST00000372621 KRTAP10-11P60412 298 aa8.41□□□□□ -1.06
CTPS1-202ENST00000372621 LINC00528Q8N1L1 170 aa8.41□□□□□ -1.06
CTPS1-202ENST00000372621 CXCL6P80162 114 aa8.4□□□□□ -1.06
CTPS1-202ENST00000372621 BCE1O60756 84 aa8.4□□□□□ -1.07
CTPS1-202ENST00000372621 Q6ZRP5 223 aa8.39□□□□□ -1.07
CTPS1-202ENST00000372621 OXLD1Q5BKU9 147 aa8.39□□□□□ -1.07
CTPS1-202ENST00000372621 HAMPP81172 84 aa8.38□□□□□ -1.07
CTPS1-202ENST00000372621 DPH3Q96FX2 82 aa8.38□□□□□ -1.07
CTPS1-202ENST00000372621 DNAH3Q8TD57 4116 aa8.38□□□□□ -1.07
CTPS1-202ENST00000372621 LINC01556Q5JQF7 62 aa8.38□□□□□ -1.07
CTPS1-202ENST00000372621 F8WDY8 70 aa8.37□□□□□ -1.07
CTPS1-202ENST00000372621 C1orf43Q9BWL3 253 aa8.37□□□□□ -1.07
CTPS1-202ENST00000372621 DNAH1Q9P2D7 4330 aa8.36□□□□□ -1.07
CTPS1-202ENST00000372621 TENM3Q9P273 2699 aa8.36□□□□□ -1.07
CTPS1-202ENST00000372621 TRAV7A0A075B6U4 112 aa8.35□□□□□ -1.07
CTPS1-202ENST00000372621 TRAV10A0A0B4J240 114 aa8.34□□□□□ -1.07
CTPS1-202ENST00000372621 IGKV2D-24A0A075B6R9 120 aa8.33□□□□□ -1.08
CTPS1-202ENST00000372621 SYCNQ0VAF6 134 aa8.33□□□□□ -1.08
CTPS1-202ENST00000372621 FAM19A5Q7Z5A7 132 aaPredicted RBP8.33□□□□□ -1.08
CTPS1-202ENST00000372621 KCNQ1DNQ9H478 68 aa8.33□□□□□ -1.08
CTPS1-202ENST00000372621 C20orf197Q8N268 126 aa8.33□□□□□ -1.08
CTPS1-202ENST00000372621 DEFB131BA0A096LNP1 70 aa8.32□□□□□ -1.08
CTPS1-202ENST00000372621 OXTP01178 125 aa8.32□□□□□ -1.08
CTPS1-202ENST00000372621 SERTAD4-AS1Q5TG53 156 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms