RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 LINC00337Q8N6G1 96 aa6.41□□□□□ -1.38
SMARCA1-202ENST00000371122 LELP1Q5T871 98 aa6.41□□□□□ -1.38
SMARCA1-202ENST00000371122 EIF4EBP3O60516 100 aaPredicted RBP6.4□□□□□ -1.39
SMARCA1-202ENST00000371122 SMCPP49901 116 aaPredicted RBP6.4□□□□□ -1.39
SMARCA1-202ENST00000371122 SPINK6Q6UWN8 80 aa6.4□□□□□ -1.39
SMARCA1-202ENST00000371122 NF1P21359 2839 aa6.39□□□□□ -1.39
SMARCA1-202ENST00000371122 WFDC13Q8IUB5 93 aa6.39□□□□□ -1.39
SMARCA1-202ENST00000371122 BEAN1Q3B7T3 259 aa6.39□□□□□ -1.39
SMARCA1-202ENST00000371122 MPLKIPQ8TAP9 179 aa6.39□□□□□ -1.39
SMARCA1-202ENST00000371122 USP17L23D6RBM5 183 aa6.38□□□□□ -1.39
SMARCA1-202ENST00000371122 DEFB116Q30KQ4 102 aa6.38□□□□□ -1.39
SMARCA1-202ENST00000371122 KLK5Q9Y337 293 aaPredicted RBP6.38□□□□□ -1.39
SMARCA1-202ENST00000371122 HIVEP1P15822 2718 aa6.38□□□□□ -1.39
SMARCA1-202ENST00000371122 ZNF73O43830 326 aaPredicted RBP6.38□□□□□ -1.39
SMARCA1-202ENST00000371122 TIMM17BO60830 172 aa6.38□□□□□ -1.39
SMARCA1-202ENST00000371122 SOSTDC1Q6X4U4 206 aa6.38□□□□□ -1.39
SMARCA1-202ENST00000371122 SHISA2Q6UWI4 295 aa6.38□□□□□ -1.39
SMARCA1-202ENST00000371122 Q8IZM0 81 aa6.37□□□□□ -1.39
SMARCA1-202ENST00000371122 FAM19A4Q96LR4 140 aa6.36□□□□□ -1.39
SMARCA1-202ENST00000371122 C10orf25Q5T742 122 aa6.35□□□□□ -1.39
SMARCA1-202ENST00000371122 KIR2DL5BQ8NHK3 375 aa6.35□□□□□ -1.39
SMARCA1-202ENST00000371122 FBN2P35556 2912 aa6.35□□□□□ -1.39
SMARCA1-202ENST00000371122 Q8N9L7 120 aa6.35□□□□□ -1.39
SMARCA1-202ENST00000371122 TRAV10A0A0B4J240 114 aa6.35□□□□□ -1.39
SMARCA1-202ENST00000371122 IGHV3OR16-9A0A0B4J2B5 98 aa6.35□□□□□ -1.39
SMARCA1-202ENST00000371122 FAM218AQ96MZ4 157 aa6.34□□□□□ -1.39
SMARCA1-202ENST00000371122 IGLV9-49A0A0B4J1Y8 123 aa6.34□□□□□ -1.39
SMARCA1-202ENST00000371122 CDIP1Q9H305 208 aa6.34□□□□□ -1.39
SMARCA1-202ENST00000371122 LYPD5Q6UWN5 251 aa6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 Q6ZRU5 148 aa6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 LINC00846Q9NV44 126 aa6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 STAB2Q8WWQ8 2551 aa6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 NDUFB1O75438 58 aa6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 Q8N814 137 aa6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 UQCRQO14949 82 aa6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 LY6G6CO95867 125 aa6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 HRNRQ86YZ3 2850 aaPredicted RBP6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 RPL28P46779 137 aaKnown RBP6.32□□□□□ -1.4
SMARCA1-202ENST00000371122 FHL3Q13643 280 aa6.32□□□□□ -1.4
SMARCA1-202ENST00000371122 M0R378 163 aa6.32□□□□□ -1.4
SMARCA1-202ENST00000371122 IGKV4-1P06312 121 aa6.32□□□□□ -1.4
SMARCA1-202ENST00000371122 MP68P56378 58 aa6.32□□□□□ -1.4
SMARCA1-202ENST00000371122 C3orf22Q8N5N4 141 aa6.32□□□□□ -1.4
SMARCA1-202ENST00000371122 FAM30AQ9NZY2 134 aa6.31□□□□□ -1.4
SMARCA1-202ENST00000371122 CSDC2Q9Y534 153 aaKnown RBP6.31□□□□□ -1.4
SMARCA1-202ENST00000371122 J3KT08 172 aa6.3□□□□□ -1.4
SMARCA1-202ENST00000371122 PRO0461Q9UI25 63 aa6.3□□□□□ -1.4
SMARCA1-202ENST00000371122 PRLHP81277 87 aa6.3□□□□□ -1.4
SMARCA1-202ENST00000371122 A0A0U1RQV1 116 aa6.29□□□□□ -1.4
SMARCA1-202ENST00000371122 ESRGQ1W209 222 aa6.29□□□□□ -1.4
SMARCA1-202ENST00000371122 Q6Q795 121 aa6.29□□□□□ -1.4
SMARCA1-202ENST00000371122 BRK1Q8WUW1 75 aa6.29□□□□□ -1.4
SMARCA1-202ENST00000371122 B9D2Q9BPU9 175 aa6.29□□□□□ -1.4
SMARCA1-202ENST00000371122 X6R8D5 127 aa6.29□□□□□ -1.4
SMARCA1-202ENST00000371122 IGLV5-39A0A0G2JS06 123 aa6.28□□□□□ -1.4
SMARCA1-202ENST00000371122 PDE6GP18545 87 aa6.28□□□□□ -1.4
SMARCA1-202ENST00000371122 M0QXV9 152 aa6.28□□□□□ -1.4
SMARCA1-202ENST00000371122 TMEM258P61165 79 aa6.28□□□□□ -1.4
SMARCA1-202ENST00000371122 C16orf95Q9H693 158 aa6.28□□□□□ -1.4
SMARCA1-202ENST00000371122 PDZD2O15018 2839 aa6.27□□□□□ -1.41
SMARCA1-202ENST00000371122 SERP2Q8N6R1 65 aa6.27□□□□□ -1.41
SMARCA1-202ENST00000371122 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.26□□□□□ -1.41
SMARCA1-202ENST00000371122 A0A1B0GUV1 79 aa6.26□□□□□ -1.41
SMARCA1-202ENST00000371122 LINC01546A6NGU7 62 aa6.26□□□□□ -1.41
SMARCA1-202ENST00000371122 EGFEM1PQ0D2K5 195 aa6.26□□□□□ -1.41
SMARCA1-202ENST00000371122 LINC00575Q6W349 94 aa6.26□□□□□ -1.41
SMARCA1-202ENST00000371122 COX7CP15954 63 aa6.26□□□□□ -1.41
SMARCA1-202ENST00000371122 NIPBLQ6KC79 2804 aaeCLIP6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 LOC107984640A0A0U1RRK4 108 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 FAM236DA0A1B0GTK5 79 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 PLAC8L1A1L4L8 177 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 FAM236CP0DP71 79 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 COX17Q14061 63 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 C1orf137Q5JT78 98 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 SPATA3Q8NHX4 192 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 NDUFC2-KCTD14E9PQ53 114 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 KRTAP24-1Q3LI83 254 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 C4orf48Q5BLP8 95 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 SBSPONQ8IVN8 264 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 ZNF575Q86XF7 245 aa6.24□□□□□ -1.41
SMARCA1-202ENST00000371122 C6orf48Q9UBA6 75 aa6.24□□□□□ -1.41
SMARCA1-202ENST00000371122 A0A087WSZ3 146 aa6.24□□□□□ -1.41
SMARCA1-202ENST00000371122 SPTSSBQ8NFR3 76 aa6.24□□□□□ -1.41
SMARCA1-202ENST00000371122 CSMD3Q7Z407 3707 aa6.23□□□□□ -1.41
SMARCA1-202ENST00000371122 PKIGQ9Y2B9 76 aa6.23□□□□□ -1.41
SMARCA1-202ENST00000371122 FAM19A3Q7Z5A8 133 aa6.23□□□□□ -1.41
SMARCA1-202ENST00000371122 RETNLBQ9BQ08 111 aa6.23□□□□□ -1.41
SMARCA1-202ENST00000371122 CHKB-CPT1BH3BT56 60 aa6.23□□□□□ -1.41
SMARCA1-202ENST00000371122 LITAFQ99732 161 aa6.23□□□□□ -1.41
SMARCA1-202ENST00000371122 FSHBP01225 129 aa6.22□□□□□ -1.41
SMARCA1-202ENST00000371122 GIG44P09565 113 aaPredicted RBP6.22□□□□□ -1.41
SMARCA1-202ENST00000371122 KRTAP1-3Q8IUG1 177 aa6.22□□□□□ -1.41
SMARCA1-202ENST00000371122 C14orf177Q52M58 125 aa6.21□□□□□ -1.41
SMARCA1-202ENST00000371122 Q6ZVQ6 151 aa6.21□□□□□ -1.41
SMARCA1-202ENST00000371122 A0A096LNT2 108 aa6.21□□□□□ -1.42
SMARCA1-202ENST00000371122 LINC01547P58512 204 aaPredicted RBP6.21□□□□□ -1.42
SMARCA1-202ENST00000371122 ZNF469Q96JG9 3925 aaPredicted RBP6.21□□□□□ -1.42
SMARCA1-202ENST00000371122 Q6JHZ5 121 aa6.2□□□□□ -1.42
SMARCA1-202ENST00000371122 MUC7Q8TAX7 377 aa6.2□□□□□ -1.42
SMARCA1-202ENST00000371122 IMUPQ9GZP8 106 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms