RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 RETNQ9HD89 108 aa6.38□□□□□ -1.39
HMGCLL1-204ENST00000370852 B4DSR2 109 aa6.37□□□□□ -1.39
HMGCLL1-204ENST00000370852 MAPK1IP1LQ8NDC0 245 aa6.37□□□□□ -1.39
HMGCLL1-204ENST00000370852 KLK12Q9UKR0 248 aa6.37□□□□□ -1.39
HMGCLL1-204ENST00000370852 C9orf66Q5T8R8 295 aa6.37□□□□□ -1.39
HMGCLL1-204ENST00000370852 Q8IZM0 81 aa6.37□□□□□ -1.39
HMGCLL1-204ENST00000370852 SETD2Q9BYW2 2564 aaPredicted RBP6.37□□□□□ -1.39
HMGCLL1-204ENST00000370852 hDV103S1A0JD37 113 aa6.36□□□□□ -1.39
HMGCLL1-204ENST00000370852 DEFB114Q30KQ6 69 aa6.36□□□□□ -1.39
HMGCLL1-204ENST00000370852 STHQ8IWL8 128 aa6.36□□□□□ -1.39
HMGCLL1-204ENST00000370852 C1orf64Q8NEQ6 169 aa6.36□□□□□ -1.39
HMGCLL1-204ENST00000370852 DYNLRB2Q8TF09 96 aa6.36□□□□□ -1.39
HMGCLL1-204ENST00000370852 USP9YO00507 2555 aaPredicted RBP6.36□□□□□ -1.39
HMGCLL1-204ENST00000370852 C3orf84H3BNL1 204 aa6.35□□□□□ -1.39
HMGCLL1-204ENST00000370852 GIG44P09565 113 aaPredicted RBP6.35□□□□□ -1.39
HMGCLL1-204ENST00000370852 UNQ6190/PRO20217Q6UXQ8 127 aa6.35□□□□□ -1.39
HMGCLL1-204ENST00000370852 SONP18583 2426 aaKnown RBP6.35□□□□□ -1.39
HMGCLL1-204ENST00000370852 POLQO75417 2590 aa6.34□□□□□ -1.39
HMGCLL1-204ENST00000370852 Q6ZRU5 148 aa6.34□□□□□ -1.39
HMGCLL1-204ENST00000370852 ZNF702PQ9H963 129 aa6.34□□□□□ -1.39
HMGCLL1-204ENST00000370852 GCN1Q92616 2671 aaKnown RBP6.34□□□□□ -1.39
HMGCLL1-204ENST00000370852 ZFYVE26Q68DK2 2539 aa6.34□□□□□ -1.39
HMGCLL1-204ENST00000370852 EPG5Q9HCE0 2579 aa6.34□□□□□ -1.39
HMGCLL1-204ENST00000370852 MSMBP08118 114 aa6.33□□□□□ -1.4
HMGCLL1-204ENST00000370852 SMIM29Q86T20 159 aa6.33□□□□□ -1.4
HMGCLL1-204ENST00000370852 TRAV22A0A0B4J277 110 aa6.33□□□□□ -1.4
HMGCLL1-204ENST00000370852 XAGE1AQ9HD64 81 aa6.33□□□□□ -1.4
HMGCLL1-204ENST00000370852 CENPEQ02224 2701 aa6.32□□□□□ -1.4
HMGCLL1-204ENST00000370852 A8MUN3 132 aa6.32□□□□□ -1.4
HMGCLL1-204ENST00000370852 ERC2-IT1O76042 136 aa6.32□□□□□ -1.4
HMGCLL1-204ENST00000370852 DEFB130BP0DP73 79 aa6.32□□□□□ -1.4
HMGCLL1-204ENST00000370852 DEFB130AP0DP74 79 aa6.32□□□□□ -1.4
HMGCLL1-204ENST00000370852 IGLV6-57P01721 117 aa6.31□□□□□ -1.4
HMGCLL1-204ENST00000370852 IGHV4-31P0DP07 118 aa6.31□□□□□ -1.4
HMGCLL1-204ENST00000370852 USP9XQ93008 2570 aaPredicted RBP6.31□□□□□ -1.4
HMGCLL1-204ENST00000370852 IGHV4-28A0A0C4DH34 117 aa6.31□□□□□ -1.4
HMGCLL1-204ENST00000370852 ZNF469Q96JG9 3925 aaPredicted RBP6.3□□□□□ -1.4
HMGCLL1-204ENST00000370852 Q1T7F1 81 aa6.3□□□□□ -1.4
HMGCLL1-204ENST00000370852 CHCHD10Q8WYQ3 142 aaPredicted RBP6.3□□□□□ -1.4
HMGCLL1-204ENST00000370852 ESM1Q9NQ30 184 aa6.3□□□□□ -1.4
HMGCLL1-204ENST00000370852 GYPEP15421 78 aa6.29□□□□□ -1.4
HMGCLL1-204ENST00000370852 NCOR2Q9Y618 2525 aa6.29□□□□□ -1.4
HMGCLL1-204ENST00000370852 MUC6Q6W4X9 2439 aa6.29□□□□□ -1.4
HMGCLL1-204ENST00000370852 PDE6GP18545 87 aa6.28□□□□□ -1.4
HMGCLL1-204ENST00000370852 FLNCQ14315 2725 aa6.28□□□□□ -1.4
HMGCLL1-204ENST00000370852 COX7BP24311 80 aa6.28□□□□□ -1.4
HMGCLL1-204ENST00000370852 COX17Q14061 63 aa6.28□□□□□ -1.4
HMGCLL1-204ENST00000370852 OTOGQ6ZRI0 2925 aa6.28□□□□□ -1.4
HMGCLL1-204ENST00000370852 ST20-AS1Q8NBB2 130 aa6.27□□□□□ -1.41
HMGCLL1-204ENST00000370852 CYSRT1A8MQ03 144 aa6.27□□□□□ -1.41
HMGCLL1-204ENST00000370852 DIRC1Q969H9 104 aa6.27□□□□□ -1.41
HMGCLL1-204ENST00000370852 ZNF73O43830 326 aaPredicted RBP6.26□□□□□ -1.41
HMGCLL1-204ENST00000370852 ANGP03950 147 aaKnown RBP6.26□□□□□ -1.41
HMGCLL1-204ENST00000370852 SYCNQ0VAF6 134 aa6.26□□□□□ -1.41
HMGCLL1-204ENST00000370852 DEFB105AQ8NG35 78 aa6.26□□□□□ -1.41
HMGCLL1-204ENST00000370852 NAV2Q8IVL1 2488 aa6.26□□□□□ -1.41
HMGCLL1-204ENST00000370852 CCL19Q99731 98 aa6.26□□□□□ -1.41
HMGCLL1-204ENST00000370852 CSNK1G2-AS1Q8NCQ2 148 aa6.25□□□□□ -1.41
HMGCLL1-204ENST00000370852 C16orf74Q96GX8 76 aa6.25□□□□□ -1.41
HMGCLL1-204ENST00000370852 LRRK2Q5S007 2527 aa6.25□□□□□ -1.41
HMGCLL1-204ENST00000370852 CD164Q04900 197 aa6.25□□□□□ -1.41
HMGCLL1-204ENST00000370852 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.24□□□□□ -1.41
HMGCLL1-204ENST00000370852 PSCAO43653 123 aa6.24□□□□□ -1.41
HMGCLL1-204ENST00000370852 REG3AQ06141 175 aa6.24□□□□□ -1.41
HMGCLL1-204ENST00000370852 SPAG11BQ08648 103 aa6.24□□□□□ -1.41
HMGCLL1-204ENST00000370852 DEFB116Q30KQ4 102 aa6.24□□□□□ -1.41
HMGCLL1-204ENST00000370852 A0A1B0GUV1 79 aa6.24□□□□□ -1.41
HMGCLL1-204ENST00000370852 IGHV4-30-4P0DP06 118 aa6.24□□□□□ -1.41
HMGCLL1-204ENST00000370852 ELOF1P60002 83 aaKnown RBP6.24□□□□□ -1.41
HMGCLL1-204ENST00000370852 Q5VV11 94 aa6.24□□□□□ -1.41
HMGCLL1-204ENST00000370852 CHD8Q9HCK8 2581 aa6.24□□□□□ -1.41
HMGCLL1-204ENST00000370852 ZCCHC13Q8WW36 166 aaKnown RBP6.23□□□□□ -1.41
HMGCLL1-204ENST00000370852 RBM12B-AS1Q9P1G2 102 aa6.23□□□□□ -1.41
HMGCLL1-204ENST00000370852 C4orf3Q8WVX3 66 aa6.23□□□□□ -1.41
HMGCLL1-204ENST00000370852 HIGD2BQ4VC39 106 aa6.22□□□□□ -1.41
HMGCLL1-204ENST00000370852 C6orf48Q9UBA6 75 aa6.22□□□□□ -1.41
HMGCLL1-204ENST00000370852 C16orf90A8MZG2 172 aa6.21□□□□□ -1.41
HMGCLL1-204ENST00000370852 DEFB4AO15263 64 aa6.21□□□□□ -1.41
HMGCLL1-204ENST00000370852 SPTSSBQ8NFR3 76 aa6.21□□□□□ -1.41
HMGCLL1-204ENST00000370852 LCE6AA0A183 80 aa6.21□□□□□ -1.42
HMGCLL1-204ENST00000370852 ANKRD17O75179 2603 aaKnown RBP6.2□□□□□ -1.42
HMGCLL1-204ENST00000370852 A0A0G2JQZ4 141 aa6.2□□□□□ -1.42
HMGCLL1-204ENST00000370852 A0A1W2PNN7 141 aa6.2□□□□□ -1.42
HMGCLL1-204ENST00000370852 Q6YL49 198 aa6.2□□□□□ -1.42
HMGCLL1-204ENST00000370852 LINC00588Q9Y4M8 146 aa6.2□□□□□ -1.42
HMGCLL1-204ENST00000370852 K7EQZ3 153 aa6.19□□□□□ -1.42
HMGCLL1-204ENST00000370852 LINC00528Q8N1L1 170 aa6.19□□□□□ -1.42
HMGCLL1-204ENST00000370852 A0A1W2PNM2 257 aa6.18□□□□□ -1.42
HMGCLL1-204ENST00000370852 CHKB-CPT1BH3BT56 60 aa6.18□□□□□ -1.42
HMGCLL1-204ENST00000370852 CCL24O00175 119 aa6.18□□□□□ -1.42
HMGCLL1-204ENST00000370852 A0A0J9YWU9 116 aa6.18□□□□□ -1.42
HMGCLL1-204ENST00000370852 DSCR10P59022 87 aa6.18□□□□□ -1.42
HMGCLL1-204ENST00000370852 Q8N377 158 aa6.18□□□□□ -1.42
HMGCLL1-204ENST00000370852 C19orf73Q9NVV2 129 aa6.18□□□□□ -1.42
HMGCLL1-204ENST00000370852 VPREB1P12018 145 aa6.17□□□□□ -1.42
HMGCLL1-204ENST00000370852 LCA10Q71F78 164 aa6.17□□□□□ -1.42
HMGCLL1-204ENST00000370852 MRPL55Q7Z7F7 128 aaKnown RBP6.17□□□□□ -1.42
HMGCLL1-204ENST00000370852 M0R378 163 aa6.16□□□□□ -1.42
HMGCLL1-204ENST00000370852 ETDCA0A1B0GVM5 59 aa6.16□□□□□ -1.42
HMGCLL1-204ENST00000370852 KPRPQ5T749 579 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms